RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 B4GALNT4Q76KP1 1039 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 FAM71BQ8TC56 605 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 SH3KBP1Q96B97 665 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 FGD4Q96M96 766 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 LZTS2Q9BRK4 669 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 FBXL21Q9UKT6 434 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 STAM2O75886 525 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 ARHGAP4P98171 946 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 CTAGE3PQ8IX95 158 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 LINS1Q8NG48 757 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 FIS1Q9Y3D6 152 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 ELP1O95163 1332 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 PRIM1P49642 420 aaKnown RBP13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 BCAMP50895 628 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 TYRO3Q06418 890 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 PRPSAP1Q14558 356 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 NONOQ15233 471 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■■□□ 14.9
SLC6A6-204ENST00000613060 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 IFT20Q8IY31 132 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 CCDC105Q8IYK2 499 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 CHURC1Q8WUH1 139 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 LRWD1Q9UFC0 647 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 FRMPD2Q68DX3 1309 aaPredicted RBP13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 PYGLP06737 847 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 IREB2P48200 963 aaKnown RBP13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 RUFY4Q6ZNE9 571 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 SNX29Q8TEQ0 813 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 BRD1O95696 1058 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 HERC4Q5GLZ8 1057 aaPredicted RBP13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 ERICH3Q5RHP9 1530 aa13.2□□□□□ -0.3
SLC6A6-204ENST00000613060 TROQ12816 1431 aaPredicted RBP13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 TAF5LO75529 589 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 ABHD8Q96I13 439 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 MRPL44Q9H9J2 332 aaKnown RBP13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 PLCB1Q9NQ66 1216 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 IL16Q14005 1332 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 LMNB1P20700 586 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 ZSCAN23Q3MJ62 389 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 MRPL46Q9H2W6 279 aaKnown RBP13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 TRPC7Q9HCX4 862 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 RAB20Q9NX57 234 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 ERBB3P21860 1342 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 A6NNZ2 444 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 F8W8V4 182 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 XPOTO43592 962 aaKnown RBP13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 DBN1Q16643 649 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 TUBB8Q3ZCM7 444 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 PIK3AP1Q6ZUJ8 805 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 CSGALNACT2Q8N6G5 542 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 MYL1P05976 194 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 ATP8B2P98198 1209 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 PPP2R5EQ16537 467 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 LCA5Q86VQ0 697 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 AFAP1L1Q8TED9 768 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 DCAF5Q96JK2 942 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 MAN1C1Q9NR34 630 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 SEPT9Q9UHD8 586 aaPredicted RBP13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 SETSIPP0DME0 302 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 PHBP35232 272 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 TUBB2AQ13885 445 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 FAM160B1Q5W0V3 765 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 TTC1Q99614 292 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 TUBB2BQ9BVA1 445 aa13.19□□□□□ -0.3
SLC6A6-204ENST00000613060 TBC1D8O95759 1140 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 TTC31Q49AM3 519 aaPredicted RBP13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 CYP26C1Q6V0L0 522 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 ESYT1Q9BSJ8 1104 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 NNMTP40261 264 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 MYL5Q02045 173 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 LONRF3Q496Y0 759 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 ARMCX5Q6P1M9 558 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 HS6ST3Q8IZP7 471 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 RIC8AQ9NPQ8 531 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 A0A1B0GUA9 196 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 TMEM87BQ96K49 555 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 SERPIND1P05546 499 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 ARHGAP44Q17R89 818 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 ARHGAP45Q92619 1136 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 TRIM31Q9BZY9 425 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 HELLSQ9NRZ9 838 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 IFNKQ9P0W0 207 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 PRR23AA6NEV1 266 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 TROVE2P10155 538 aaKnown RBP eCLIP13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 COG7P83436 770 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 XKR9Q5GH70 373 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 DSTYKQ6XUX3 929 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 MCF2L2Q86YR7 1114 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 TBC1D22AQ8WUA7 517 aa13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 FAM49AQ9H0Q0 323 aaPredicted RBP13.18□□□□□ -0.3
SLC6A6-204ENST00000613060 RAD17O75943 681 aa13.17□□□□□ -0.3
SLC6A6-204ENST00000613060 MTMR3Q13615 1198 aa13.17□□□□□ -0.3
SLC6A6-204ENST00000613060 RAPH1Q70E73 1250 aa13.17□□□□□ -0.3
SLC6A6-204ENST00000613060 CPSF2Q9P2I0 782 aaKnown RBP13.17□□□□□ -0.3
SLC6A6-204ENST00000613060 GARSP41250 739 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms