RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 PSMB7Q99436 277 aa9.55□□□□□ -0.88
TMCO1-208ENST00000612311 SRPRBQ9Y5M8 271 aaKnown RBP9.55□□□□□ -0.88
TMCO1-208ENST00000612311 CLTCQ00610 1675 aaKnown RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 MYCLP12524 364 aaPredicted RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 COPB1P53618 953 aaKnown RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 ICA1Q05084 483 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 BIRC3Q13489 604 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 SCARF1Q14162 830 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 PRR16Q569H4 304 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 DNAJC21Q5F1R6 531 aaKnown RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 SFMBT2Q5VUG0 894 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 SLFN13Q68D06 897 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 MB21D2Q8IYB1 491 aaPredicted RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 FNBP1Q96RU3 617 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 SLC39A2Q9NP94 309 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 C1orf167Q5SNV9 1468 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 NF2P35240 595 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 FAM26FQ5R3K3 315 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 GPATCH4Q5T3I0 446 aaKnown RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 UTP14CQ5TAP6 766 aaKnown RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 MSL1Q68DK7 614 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 NBPF11Q86T75 865 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 ENOX1Q8TC92 643 aaKnown RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 STAG1Q8WVM7 1258 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 DDX12PQ92771 950 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 CCDC77Q9BR77 488 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 ALDH8A1Q9H2A2 487 aaPredicted RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 PICK1Q9NRD5 415 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 MAN1B1Q9UKM7 699 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 MTUS1Q9ULD2 1270 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 PCDHB13Q9Y5F0 798 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 PCDHA1Q9Y5I3 950 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 TLDC2A0PJX2 215 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 LAD1O00515 517 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 GAS7O60861 476 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 FLOT1O75955 427 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 PLCB3Q01970 1234 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 FBXO11Q86XK2 927 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 TPH2Q8IWU9 490 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 SMYD4Q8IYR2 804 aaPredicted RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 CCDC26Q8TAB7 109 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 KIFC2Q96AC6 838 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 BRIP1Q9BX63 1249 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 HAUS4Q9H6D7 363 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 GNA14O95837 355 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 CDC25AP30304 524 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 ASPRV1Q53RT3 343 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 CYB5R4Q7L1T6 521 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 DYNLL2Q96FJ2 89 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 CUEDC2Q9H467 287 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 MAGEF1Q9HAY2 307 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 MTRF1LQ9UGC7 380 aaKnown RBP9.54□□□□□ -0.88
TMCO1-208ENST00000612311 SERPINB13Q9UIV8 391 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 SAR1BQ9Y6B6 198 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 WDR19Q8NEZ3 1342 aa9.54□□□□□ -0.88
TMCO1-208ENST00000612311 TECPR2O15040 1411 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 DKC1O60832 514 aaKnown RBP eCLIP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 RPS6KA4O75676 772 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 GPR161Q8N6U8 529 aaKnown RBP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 INCENPQ9NQS7 918 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 DDX25Q9UHL0 483 aaKnown RBP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 TRPC5Q9UL62 973 aaPredicted RBP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 EPN1Q9Y6I3 576 aaPredicted RBP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 CEMIPQ8WUJ3 1361 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 SPOPO43791 374 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 ZEB2O60315 1214 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 ALX1Q15699 326 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 STOX1Q6ZVD7 989 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 TMC4Q7Z404 712 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 DGKHQ86XP1 1220 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 CCDC50Q8IVM0 306 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 FAM76AQ8TAV0 307 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 UBE2Q2Q8WVN8 375 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 AK8Q96MA6 479 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 HOMER2Q9NSB8 354 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 ARMCX3Q9UH62 379 aaPredicted RBP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 CEP83Q9Y592 693 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 ZC3H13Q5T200 1668 aaKnown RBP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 EBAG9O00559 213 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 HARSP12081 509 aaKnown RBP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 CASP14P31944 242 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 NIM1KQ8IY84 436 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 SMAP1Q8IYB5 467 aaPredicted RBP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 NAP1L3Q99457 506 aaPredicted RBP9.53□□□□□ -0.88
TMCO1-208ENST00000612311 MINPP1Q9UNW1 487 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 EXOC7Q9UPT5 735 aa9.53□□□□□ -0.88
TMCO1-208ENST00000612311 PLEKHA8P1O95397 391 aa9.52□□□□□ -0.88
TMCO1-208ENST00000612311 XRCC5P13010 732 aaKnown RBP9.52□□□□□ -0.88
TMCO1-208ENST00000612311 PTPREP23469 700 aa9.52□□□□□ -0.88
TMCO1-208ENST00000612311 PRDX5P30044 214 aa9.52□□□□□ -0.88
TMCO1-208ENST00000612311 CALCOCO2Q13137 446 aa9.52□□□□□ -0.88
TMCO1-208ENST00000612311 GRAPQ13588 217 aa9.52□□□□□ -0.88
TMCO1-208ENST00000612311 WDR44Q5JSH3 913 aa9.52□□□□□ -0.88
TMCO1-208ENST00000612311 GRAPLQ8TC17 118 aaPredicted RBP9.52□□□□□ -0.88
TMCO1-208ENST00000612311 CNKSR1Q969H4 720 aa9.52□□□□□ -0.88
TMCO1-208ENST00000612311 IFT74Q96LB3 600 aa9.52□□□□□ -0.88
TMCO1-208ENST00000612311 TUBGCP2Q9BSJ2 902 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms