RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 ZKSCAN4Q969J2 545 aaPredicted RBP15.34■□□□□ 0.05
NEAT1-204ENST00000612303 SHISA4Q96DD7 197 aa15.34■□□□□ 0.05
NEAT1-204ENST00000612303 CPVLQ9H3G5 476 aa15.34■□□□□ 0.05
NEAT1-204ENST00000612303 LMBRD1Q9NUN5 540 aa15.34■□□□□ 0.05
NEAT1-204ENST00000612303 CNPY2Q9Y2B0 182 aa15.34■□□□□ 0.05
NEAT1-204ENST00000612303 PHIPQ8WWQ0 1821 aa15.33■□□□□ 0.05
NEAT1-204ENST00000612303 UNCXA6NJT0 531 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 BTBD18B2RXH4 712 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 KIF28PB7ZC32 967 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 TMEM232C9JQI7 657 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 WDR46O15213 610 aaKnown RBP15.33■□□□□ 0.04
NEAT1-204ENST00000612303 SLC16A2P36021 539 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 BACE1P56817 501 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 NPY5RQ15761 445 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 KIAA1755Q5JYT7 1200 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 SYDE2Q5VT97 1194 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 MYSM1Q5VVJ2 828 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 PPP1R18Q6NYC8 613 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 FAM173BQ6P4H8 233 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.33■□□□□ 0.04
NEAT1-204ENST00000612303 HEATR3Q7Z4Q2 680 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 GLIS2Q9BZE0 524 aaPredicted RBP15.33■□□□□ 0.04
NEAT1-204ENST00000612303 ZMYND12Q9H0C1 365 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 RRAGCQ9HB90 399 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.33■□□□□ 0.04
NEAT1-204ENST00000612303 FEM1BQ9UK73 627 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 PCDHA4Q9UN74 947 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 CLEC11AQ9Y240 323 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 ELP1O95163 1332 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 PAPPA2Q9BXP8 1791 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 SRCAPQ6ZRS2 3230 aa15.33■□□□□ 0.04
NEAT1-204ENST00000612303 PRPF40AO75400 957 aaKnown RBP15.32■□□□□ 0.04
NEAT1-204ENST00000612303 NCLP19338 710 aaKnown RBP15.32■□□□□ 0.04
NEAT1-204ENST00000612303 GNA11P29992 359 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 STAT2P52630 851 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 SPP2Q13103 211 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 FAM83BQ5T0W9 1011 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 ARMC9Q7Z3E5 817 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 CCDC84Q86UT8 332 aaPredicted RBP15.32■□□□□ 0.04
NEAT1-204ENST00000612303 LDHDQ86WU2 507 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 HOMER1Q86YM7 354 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 TEX2Q8IWB9 1127 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 SPICE1Q8N0Z3 855 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 RBM46Q8TBY0 533 aaKnown RBP15.32■□□□□ 0.04
NEAT1-204ENST00000612303 GPKOWQ92917 476 aaPredicted RBP eCLIP15.32■□□□□ 0.04
NEAT1-204ENST00000612303 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 C12orf42Q96LP6 360 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
NEAT1-204ENST00000612303 GLT8D2Q9H1C3 349 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 C6orf50Q9HD87 102 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 RTEL1Q9NZ71 1219 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 RCOR1Q9UKL0 485 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
NEAT1-204ENST00000612303 CSADQ9Y600 493 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 ZHX2Q9Y6X8 837 aa15.32■□□□□ 0.04
NEAT1-204ENST00000612303 NAPAP54920 295 aa15.31■□□□□ 0.04
NEAT1-204ENST00000612303 RILPL1Q5EBL4 403 aa15.31■□□□□ 0.04
NEAT1-204ENST00000612303 ANKRD13AQ8IZ07 590 aa15.31■□□□□ 0.04
NEAT1-204ENST00000612303 BLIDQ8IZY5 108 aa15.31■□□□□ 0.04
NEAT1-204ENST00000612303 BICD2Q8TD16 824 aa15.31■□□□□ 0.04
NEAT1-204ENST00000612303 TNFRSF25Q93038 417 aa15.31■□□□□ 0.04
NEAT1-204ENST00000612303 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
NEAT1-204ENST00000612303 TFIP11Q9UBB9 837 aaKnown RBP15.31■□□□□ 0.04
NEAT1-204ENST00000612303 PRR12Q9ULL5 1215 aa15.31■□□□□ 0.04
NEAT1-204ENST00000612303 AFG3L2Q9Y4W6 797 aa15.31■□□□□ 0.04
NEAT1-204ENST00000612303 SNCAIPQ9Y6H5 919 aa15.31■□□□□ 0.04
NEAT1-204ENST00000612303 YEATS4O95619 227 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 FDX1P10109 184 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 IKQ13123 557 aaPredicted RBP15.3■□□□□ 0.04
NEAT1-204ENST00000612303 PRKG1Q13976 671 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 VGLL4Q14135 290 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 NBR1Q14596 966 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 CDC37Q16543 378 aaPredicted RBP15.3■□□□□ 0.04
NEAT1-204ENST00000612303 QRICH1Q2TAL8 776 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 SH3D19Q5HYK7 790 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 TYW1BQ6NUM6 668 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 DLK2Q6UY11 383 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 OXER1Q8TDS5 423 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 LEO1Q8WVC0 666 aaPredicted RBP15.3■□□□□ 0.04
NEAT1-204ENST00000612303 SPATA32Q96LK8 384 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 USP28Q96RU2 1077 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 EMILIN3Q9NT22 766 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 FZD1Q9UP38 647 aa15.3■□□□□ 0.04
NEAT1-204ENST00000612303 OTOFQ9HC10 1997 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 SMCO2A6NFE2 343 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 M0R2N6 131 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 FIBPO43427 364 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 TRAK2O60296 914 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 TRAPPC10P48553 1259 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 NASPP49321 788 aaPredicted RBP15.29■□□□□ 0.04
NEAT1-204ENST00000612303 FKBP1BP68106 108 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 PPATQ06203 517 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 NR5A1Q13285 461 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 MTMR2Q13614 643 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
NEAT1-204ENST00000612303 LDLRAD1Q5T700 205 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 ANO1Q5XXA6 986 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 ERO1BQ86YB8 467 aa15.29■□□□□ 0.04
NEAT1-204ENST00000612303 PRPF38AQ8NAV1 312 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms