RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TCERG1LQ5VWI1 586 aa6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 TMPRSS7Q7RTY8 843 aa6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 PRRT2Q7Z6L0 340 aaPredicted RBP6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 ZNF605Q86T29 641 aa6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 ANAPC16Q96DE5 110 aa6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 XYLT2Q9H1B5 865 aa6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 C19orf44Q9H6X5 657 aa6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 GCM1Q9NP62 436 aa6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 MRVI1Q9Y6F6 885 aa6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 SLC22A31A6NKX4 558 aa6.66□□□□□ -1.34
SMCHD1-213ENST00000609587 WASH4PA8MWX3 477 aa6.66□□□□□ -1.34
SMCHD1-213ENST00000609587 DNAJA2O60884 412 aa6.66□□□□□ -1.34
SMCHD1-213ENST00000609587 SSPNQ14714 243 aa6.66□□□□□ -1.34
SMCHD1-213ENST00000609587 LRRFIP1Q32MZ4 808 aaKnown RBP6.66□□□□□ -1.34
SMCHD1-213ENST00000609587 ARMC5Q96C12 935 aa6.66□□□□□ -1.34
SMCHD1-213ENST00000609587 SHDQ96IW2 340 aa6.66□□□□□ -1.34
SMCHD1-213ENST00000609587 CCDC74BQ96LY2 380 aa6.66□□□□□ -1.34
SMCHD1-213ENST00000609587 GMIPQ9P107 970 aa6.66□□□□□ -1.34
SMCHD1-213ENST00000609587 CNOT6Q9ULM6 557 aaKnown RBP6.66□□□□□ -1.34
SMCHD1-213ENST00000609587 PEX10O60683 326 aa6.65□□□□□ -1.34
SMCHD1-213ENST00000609587 GIPRP48546 466 aa6.65□□□□□ -1.34
SMCHD1-213ENST00000609587 PIWIL2Q8TC59 973 aaKnown RBP6.65□□□□□ -1.34
SMCHD1-213ENST00000609587 SLC6A17Q9H1V8 727 aa6.65□□□□□ -1.34
SMCHD1-213ENST00000609587 ZNF408Q9H9D4 720 aa6.65□□□□□ -1.34
SMCHD1-213ENST00000609587 KLHL3Q9UH77 587 aa6.65□□□□□ -1.34
SMCHD1-213ENST00000609587 KCTD3Q9Y597 815 aa6.65□□□□□ -1.34
SMCHD1-213ENST00000609587 ADAMTS20P59510 1910 aa6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 ETFBP38117 255 aa6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 GAB4Q2WGN9 574 aa6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 CDCP2Q5VXM1 449 aa6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 CREG2Q8IUH2 290 aa6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 RBBP8NLQ8NC74 664 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 OR6P1Q8NGX9 317 aa6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 INTS4Q96HW7 963 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 HIRIP3Q9BW71 556 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 SGPP1Q9BX95 441 aa6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 ANTXR1Q9H6X2 564 aa6.64□□□□□ -1.35
SMCHD1-213ENST00000609587 TEX51A0A1B0GUA7 166 aa6.63□□□□□ -1.35
SMCHD1-213ENST00000609587 MEIS3P2A8K0S8 358 aa6.63□□□□□ -1.35
SMCHD1-213ENST00000609587 RGS13O14921 159 aa6.63□□□□□ -1.35
SMCHD1-213ENST00000609587 ZGLP1P0C6A0 271 aa6.63□□□□□ -1.35
SMCHD1-213ENST00000609587 OVOS1Q6IE37 1185 aa6.63□□□□□ -1.35
SMCHD1-213ENST00000609587 LSRQ86X29 649 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-213ENST00000609587 PHACTR4Q8IZ21 702 aa6.63□□□□□ -1.35
SMCHD1-213ENST00000609587 PDZD8Q8NEN9 1154 aa6.63□□□□□ -1.35
SMCHD1-213ENST00000609587 RNF141Q8WVD5 230 aa6.63□□□□□ -1.35
SMCHD1-213ENST00000609587 DNAJC2Q99543 621 aaKnown RBP6.63□□□□□ -1.35
SMCHD1-213ENST00000609587 ZNF385BQ569K4 471 aa6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 ARSHQ5FYA8 562 aa6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 CKAP2LQ8IYA6 745 aa6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 FAM169BQ8N8A8 192 aa6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 VWCEQ96DN2 955 aa6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 ATG4CQ96DT6 458 aa6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 Q96M66 194 aa6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 KIF2CQ99661 725 aa6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 CNNM2Q9H8M5 875 aa6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 PRKAG3Q9UGI9 489 aa6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 YBX2Q9Y2T7 364 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-213ENST00000609587 OTOL1A6NHN0 477 aaPredicted RBP6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 RFXAPO00287 272 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 SMAD7O15105 426 aaKnown RBP6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 RAG1P15918 1043 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 GBP1P32455 592 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 CCNFP41002 786 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 RBL2Q08999 1139 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 TNNI3KQ59H18 835 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 RUFY4Q6ZNE9 571 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 ANKS3Q6ZW76 656 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 NLRC3Q7RTR2 1065 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 LILRA2Q8N149 483 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 KREMEN1Q96MU8 473 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 TM9SF2Q99805 663 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 ASPNQ9BXN1 380 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 KCNH3Q9ULD8 1083 aa6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 R3HCC1Q9Y3T6 440 aaKnown RBP6.61□□□□□ -1.35
SMCHD1-213ENST00000609587 UBOX5O94941 541 aa6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 ADRB1P08588 477 aa6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 NME1P15531 152 aaKnown RBP6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 PI3P19957 117 aa6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 SOGA3Q5TF21 947 aa6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 TMEM151BQ8IW70 566 aa6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 DTWD2Q8NBA8 298 aa6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 PMFBP1Q8TBY8 1022 aa6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 GPR62Q9BZJ7 368 aa6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.6□□□□□ -1.352e-8■■■■□ 22
SMCHD1-213ENST00000609587 DUSP15Q9H1R2 295 aaPredicted RBP6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 ZNF552Q9H707 407 aaPredicted RBP6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 CWC22Q9HCG8 908 aaKnown RBP6.6□□□□□ -1.35
SMCHD1-213ENST00000609587 CELA3BP08861 270 aa6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 GUCY2CP25092 1073 aa6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 TPP2P29144 1249 aaPredicted RBP6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 NR0B2Q15466 257 aa6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 PPP2R5EQ16537 467 aa6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 INTS3Q68E01 1043 aaKnown RBP6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 TAB3Q8N5C8 712 aaPredicted RBP6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 HNRNPLLQ8WVV9 542 aaKnown RBP6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 TRIT1Q9H3H1 467 aaKnown RBP6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 TMPRSS5Q9H3S3 457 aa6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 ACTR10Q9NZ32 417 aa6.59□□□□□ -1.35
SMCHD1-213ENST00000609587 FITM1A5D6W6 292 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms