RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 MROH8Q9H579 483 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 RAVER2Q9HCJ3 691 aaKnown RBP14.55□□□□□ -0.08
CTSA-210ENST00000606000 SYNPO2Q9UMS6 1093 aa14.55□□□□□ -0.08
CTSA-210ENST00000606000 TMEM232C9JQI7 657 aa14.54□□□□□ -0.08
CTSA-210ENST00000606000 HIP1O00291 1037 aa14.54□□□□□ -0.08
CTSA-210ENST00000606000 IGHA2P01877 340 aa14.54□□□□□ -0.08
CTSA-210ENST00000606000 PGK2P07205 417 aa14.54□□□□□ -0.08
CTSA-210ENST00000606000 NOVP48745 357 aa14.54□□□□□ -0.08
CTSA-210ENST00000606000 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
CTSA-210ENST00000606000 MFAP1P55081 439 aaKnown RBP14.54□□□□□ -0.08
CTSA-210ENST00000606000 SNAP25P60880 206 aa14.54□□□□□ -0.08
CTSA-210ENST00000606000 AKNAD1Q5T1N1 836 aa14.54□□□□□ -0.08
CTSA-210ENST00000606000 SNRNP48Q6IEG0 339 aaKnown RBP14.54□□□□□ -0.08
CTSA-210ENST00000606000 STAG1Q8WVM7 1258 aa14.54□□□□□ -0.08
CTSA-210ENST00000606000 MMP19Q99542 508 aa14.54□□□□□ -0.08
CTSA-210ENST00000606000 ZKSCAN3Q9BRR0 538 aa14.54□□□□□ -0.08
CTSA-210ENST00000606000 STRNO43815 780 aa14.53□□□□□ -0.08
CTSA-210ENST00000606000 SLC25A27O95847 323 aa14.53□□□□□ -0.08
CTSA-210ENST00000606000 FCER1AP12319 257 aa14.53□□□□□ -0.08
CTSA-210ENST00000606000 TAL1P17542 331 aaPredicted RBP14.53□□□□□ -0.08
CTSA-210ENST00000606000 SLC1A4P43007 532 aa14.53□□□□□ -0.08
CTSA-210ENST00000606000 MFSD6Q6ZSS7 791 aa14.53□□□□□ -0.08
CTSA-210ENST00000606000 PRPF38AQ8NAV1 312 aaKnown RBP14.53□□□□□ -0.08
CTSA-210ENST00000606000 GMCL1Q96IK5 515 aa14.53□□□□□ -0.08
CTSA-210ENST00000606000 PAWRQ96IZ0 340 aaKnown RBP14.53□□□□□ -0.08
CTSA-210ENST00000606000 TEX13BQ9BXU2 312 aa14.53□□□□□ -0.08
CTSA-210ENST00000606000 SLC38A10Q9HBR0 1119 aa14.53□□□□□ -0.08
CTSA-210ENST00000606000 FEM1BQ9UK73 627 aa14.53□□□□□ -0.08
CTSA-210ENST00000606000 FRMPD2Q68DX3 1309 aaPredicted RBP14.52□□□□□ -0.08
CTSA-210ENST00000606000 ZNF213O14771 459 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 CYBAP13498 195 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 CHMLP26374 656 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 PRAMEF19Q5SWL8 479 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 MFSD14CQ5VZR4 134 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 LHX8Q68G74 356 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 TTBK2Q6IQ55 1244 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 RCSD1Q6JBY9 416 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 ABRAQ8N0Z2 381 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 MAML3Q96JK9 1138 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 TMEM47Q9BQJ4 181 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 DSCC1Q9BVC3 393 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 OGDHLQ9ULD0 1010 aa14.52□□□□□ -0.09
CTSA-210ENST00000606000 ZNF536O15090 1300 aa14.51□□□□□ -0.09
CTSA-210ENST00000606000 B4E1Z4 1266 aa14.51□□□□□ -0.09
CTSA-210ENST00000606000 ZBED4O75132 1171 aa14.51□□□□□ -0.09
CTSA-210ENST00000606000 CNGA1P29973 690 aa14.51□□□□□ -0.09
CTSA-210ENST00000606000 STAT2P52630 851 aa14.51□□□□□ -0.09
CTSA-210ENST00000606000 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
CTSA-210ENST00000606000 IKQ13123 557 aaPredicted RBP14.51□□□□□ -0.09
CTSA-210ENST00000606000 CCDC96Q2M329 555 aa14.51□□□□□ -0.09
CTSA-210ENST00000606000 ANO1Q5XXA6 986 aa14.51□□□□□ -0.09
CTSA-210ENST00000606000 OLFML2BQ68BL8 750 aa14.51□□□□□ -0.09
CTSA-210ENST00000606000 DPF3Q92784 378 aa14.51□□□□□ -0.09
CTSA-210ENST00000606000 PCDH10Q9P2E7 1040 aa14.51□□□□□ -0.09
CTSA-210ENST00000606000 RAD50Q92878 1312 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 H0YGN5 161 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 KDM4AO75164 1064 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 SLC16A2P36021 539 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 PTH1RQ03431 593 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 KCTD2Q14681 263 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 ZNF792Q3KQV3 632 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 CCDC174Q6PII3 467 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 AGBL1Q96MI9 1066 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 HOMER2Q9NSB8 354 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 TCP11L1Q9NUJ3 509 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 PRR12Q9ULL5 1215 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 CTDP1Q9Y5B0 961 aaPredicted RBP14.5□□□□□ -0.09
CTSA-210ENST00000606000 LCTP09848 1927 aa14.5□□□□□ -0.09
CTSA-210ENST00000606000 PFASO15067 1338 aa14.49□□□□□ -0.09
CTSA-210ENST00000606000 ATP2A1O14983 1001 aa14.49□□□□□ -0.09
CTSA-210ENST00000606000 TOP1P11387 765 aaKnown RBP14.49□□□□□ -0.09
CTSA-210ENST00000606000 PPP4R3BQ5MIZ7 849 aa14.49□□□□□ -0.09
CTSA-210ENST00000606000 FAM160B2Q86V87 743 aa14.49□□□□□ -0.09
CTSA-210ENST00000606000 ESR2Q92731 530 aa14.49□□□□□ -0.09
CTSA-210ENST00000606000 RNF41Q9H4P4 317 aaPredicted RBP14.49□□□□□ -0.09
CTSA-210ENST00000606000 GPCPD1Q9NPB8 672 aa14.49□□□□□ -0.09
CTSA-210ENST00000606000 DDX20Q9UHI6 824 aaKnown RBP14.49□□□□□ -0.09
CTSA-210ENST00000606000 TAF6LQ9Y6J9 622 aa14.49□□□□□ -0.09
CTSA-210ENST00000606000 LRRC37A2A6NM11 1700 aa14.49□□□□□ -0.09
CTSA-210ENST00000606000 PDE4DIPQ5VU43 2346 aa14.48□□□□□ -0.09
CTSA-210ENST00000606000 PDHBP11177 359 aa14.48□□□□□ -0.09
CTSA-210ENST00000606000 PCP11498 1178 aaKnown RBP14.48□□□□□ -0.09
CTSA-210ENST00000606000 COPB2P35606 906 aa14.48□□□□□ -0.09
CTSA-210ENST00000606000 IMMTQ16891 758 aaKnown RBP14.48□□□□□ -0.09
CTSA-210ENST00000606000 NECAB2Q7Z6G3 386 aa14.48□□□□□ -0.09
CTSA-210ENST00000606000 ANKLE1Q8NAG6 615 aa14.48□□□□□ -0.09
CTSA-210ENST00000606000 DCAF4Q8WV16 495 aa14.48□□□□□ -0.09
CTSA-210ENST00000606000 FGD4Q96M96 766 aa14.48□□□□□ -0.09
CTSA-210ENST00000606000 HTATIP2Q9BUP3 242 aa14.48□□□□□ -0.09
CTSA-210ENST00000606000 C11orf49Q9H6J7 331 aa14.48□□□□□ -0.09
CTSA-210ENST00000606000 SLC5A4Q9NY91 659 aa14.48□□□□□ -0.09
CTSA-210ENST00000606000 DNAJC25-GNG10A0A024R161 153 aa14.47□□□□□ -0.09
CTSA-210ENST00000606000 SGSM2O43147 1006 aa14.47□□□□□ -0.09
CTSA-210ENST00000606000 GOLGA8HP0CJ92 632 aa14.47□□□□□ -0.09
CTSA-210ENST00000606000 OAZ1P54368 228 aa14.47□□□□□ -0.09
CTSA-210ENST00000606000 CHURC1Q8WUH1 139 aa14.47□□□□□ -0.09
CTSA-210ENST00000606000 LENG1Q96BZ8 264 aaPredicted RBP14.47□□□□□ -0.09
CTSA-210ENST00000606000 DDX11Q96FC9 970 aa14.47□□□□□ -0.09
CTSA-210ENST00000606000 CPVLQ9H3G5 476 aa14.47□□□□□ -0.09
CTSA-210ENST00000606000 RNF146Q9NTX7 359 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms