RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 VWA5AO00534 786 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SEC24BO95487 1268 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SLC25A27O95847 323 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 GNAQP50148 359 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ERVK-24P63145 666 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 LACTBP83111 547 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 IKQ13123 557 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 GRM4Q14833 912 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 APOA5Q6Q788 366 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 NFXL1Q6ZNB6 911 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 TEX13BQ9BXU2 312 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 BACH2Q9BYV9 841 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 C22orf23Q9BZE7 217 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SLC38A10Q9HBR0 1119 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 RBM28Q9NW13 759 aaKnown RBP11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 PLXNB2O15031 1838 aa11.06□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CCDC196A0A1B0GTZ2 297 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ZBED4O75132 1171 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 FCGRTP55899 365 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 PKN2Q16513 984 aaKnown RBP11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 TKFCQ3LXA3 575 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SYDE2Q5VT97 1194 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CHST3Q7LGC8 479 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 TEX2Q8IWB9 1127 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ANKRD13CQ8N6S4 541 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 REPS2Q8NFH8 660 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ZNF296Q8WUU4 475 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ATG4CQ96DT6 458 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 NUP88Q99567 741 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SPZ1Q9BXG8 430 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 MROH8Q9H579 483 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 RBPJLQ9UBG7 517 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 FBXO40Q9UH90 709 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CPA4Q9UI42 421 aa11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ZNF214Q9UL59 606 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CTDP1Q9Y5B0 961 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ZBTB43O43298 467 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 HOXD10P28358 340 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 KCTD1Q719H9 257 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 RIOX2Q8IUF8 465 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ABRAQ8N0Z2 381 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SOCS4Q8WXH5 440 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 KIFC2Q96AC6 838 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CHMP4CQ96CF2 233 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 TBC1D32Q96NH3 1257 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SPATC1LQ9H0A9 340 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 RANBP17Q9H2T7 1088 aaKnown RBP11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 FBXO28Q9NVF7 368 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 MAD2L2Q9UI95 211 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 PRR12Q9ULL5 1215 aa11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ISY1Q9ULR0 285 aaKnown RBP11.04□□□□□ -0.64
SQSTM1P1-201ENST00000603451 KLF18A0A0U1RQI7 1052 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 KLRF2D3W0D1 207 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 STRNO43815 780 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CNMDO75829 334 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ICAM1P05362 532 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 LBX1P52954 281 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 RABEP1Q15276 862 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 Q6ZUG5 572 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 FANCBQ8NB91 859 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CHST13Q8NET6 341 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 BRF1Q92994 677 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 COA7Q96BR5 231 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ZNF274Q96GC6 653 aaPredicted RBP11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 PAGR1Q9BTK6 254 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 UPF3BQ9BZI7 483 aaKnown RBP11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 R3HDMLQ9H3Y0 253 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 TXNRD2Q9NNW7 524 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 PDRG1Q9NUG6 133 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 BTBD7Q9P203 1132 aa11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 FRMPD2Q68DX3 1309 aaPredicted RBP11.03□□□□□ -0.64
SQSTM1P1-201ENST00000603451 GOLGA8BA8MQT2 603 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 hCG_1984214I3L0E3 225 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TNPO2O14787 897 aaKnown RBP11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 STAT3P40763 770 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 COL9A3Q14050 684 aaPredicted RBP11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TOB2Q14106 344 aaPredicted RBP11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TMEM132BQ14DG7 1078 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 POTEEQ6S8J3 1075 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TMTC3Q6ZXV5 915 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CTU1Q7Z7A3 348 aaKnown RBP11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MICU3Q86XE3 530 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CCAR1Q8IX12 1150 aaKnown RBP11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SAMD3Q8N6K7 520 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ZNF713Q8N859 430 aaPredicted RBP11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MTMR8Q96EF0 704 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MOV10L1Q9BXT6 1211 aaKnown RBP11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RIOX1Q9H6W3 641 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SENP2Q9HC62 589 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 IVNS1ABPQ9Y6Y0 642 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ZSWIM8A7E2V4 1837 aa11.02□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SLC15A5A6NIM6 579 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 GOLGA8AA7E2F4 631 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ZBTB5O15062 677 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 DHX16O60231 1041 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms