RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 TRPC6Q9Y210 931 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 PARP3Q9Y6F1 533 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 YTHDC2Q9H6S0 1430 aaKnown RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 TNRQ92752 1358 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 LRGUKQ96M69 825 aa10.52□□□□□ -0.72
CSMD1-217ENST00000602723 PDCD2Q16342 344 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-217ENST00000602723 NOSTRINQ8IVI9 506 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 LRRC8AQ8IWT6 810 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 METTL22Q9BUU2 404 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-217ENST00000602723 ST7Q9NRC1 585 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 ZNF277Q9NRM2 450 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-217ENST00000602723 C1orf112Q9NSG2 853 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 COL17A1Q9UMD9 1497 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-217ENST00000602723 A0A1W2PP64 1363 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 GUCY2DQ02846 1103 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 NLRP7Q8WX94 980 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 GPATCH8Q9UKJ3 1502 aaKnown RBP10.52□□□□□ -0.73
CSMD1-217ENST00000602723 UHRF1BP1LA0JNW5 1464 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 MYO5CQ9NQX4 1742 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 DNM2P50570 870 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 ADALQ6DHV7 355 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 STAMQ92783 540 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 IWS1Q96ST2 819 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 RRP15Q9Y3B9 282 aaKnown RBP10.52□□□□□ -0.73
CSMD1-217ENST00000602723 DNMT1P26358 1616 aaKnown RBP10.52□□□□□ -0.73
CSMD1-217ENST00000602723 GOLGA8QA0A0J9YX86 632 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 GOLGA8OA6NCC3 632 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 GOLGA8NF8WBI6 632 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 BUB1O43683 1085 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 IL9RQ01113 521 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 CAPN12Q6ZSI9 719 aa10.52□□□□□ -0.73
CSMD1-217ENST00000602723 KIF11P52732 1056 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 DMTNQ08495 405 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 RCN2Q14257 317 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 KBTBD3Q8NAB2 608 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 TXLNGQ9NUQ3 528 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 TCHHQ07283 1943 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-217ENST00000602723 PSDA5PKW4 1024 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-217ENST00000602723 TRIM37O94972 964 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 PDE6CP51160 858 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 APBA1Q02410 837 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 KMT5BQ4FZB7 885 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 TIMM10P62072 90 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 KCTD16Q68DU8 428 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 ARMCX3Q9UH62 379 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-217ENST00000602723 TCP1P17987 556 aaKnown RBP10.51□□□□□ -0.73
CSMD1-217ENST00000602723 MYOCDQ8IZQ8 938 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 TEKT1Q969V4 418 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 CNTRLQ7Z7A1 2325 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 SCYL3Q8IZE3 742 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
CSMD1-217ENST00000602723 TSPOAP1O95153 1857 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 SAT1P21673 171 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 BBOF1Q8ND07 529 aa10.51□□□□□ -0.73
CSMD1-217ENST00000602723 ME3Q16798 604 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 EFCAB13Q8IY85 973 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 PPWD1Q96BP3 646 aaKnown RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 HDAC11Q96DB2 347 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 DPH5Q9H2P9 285 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 PCDHB13Q9Y5F0 798 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 EHHADHQ08426 723 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 RINT1Q6NUQ1 792 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 FAM89AQ96GI7 184 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 RUNDC3BQ96NL0 473 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 SBNO1A3KN83 1393 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 SH3TC1Q8TE82 1336 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ZBTB7BO15156 539 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 PPP2R5AQ15172 486 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 DDB1Q16531 1140 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 SPATA5Q8NB90 893 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 LRRC59Q96AG4 307 aaKnown RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 TTC4O95801 387 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 DCLK2Q8N568 766 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 MAST3O60307 1309 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ETF1P62495 437 aaKnown RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 TMTC3Q6ZXV5 915 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 PDZD4Q76G19 769 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 TRIM56Q9BRZ2 755 aaKnown RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ZMYM6O95789 1325 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 APOEP02649 317 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 YARSP54577 528 aaKnown RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ESRRGP62508 458 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 DMP1Q13316 513 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 MRFAP1L1Q96HT8 127 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 KCNG1Q9UIX4 513 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 E7EWF7 191 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 RNMTO43148 476 aaKnown RBP10.5□□□□□ -0.73
CSMD1-217ENST00000602723 BIRC2Q13490 618 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 DBNDD2Q9BQY9 259 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 GNPATO15228 680 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ANKRD20A4Q4UJ75 823 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ANKRD20A8PQ5CZ79 823 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ANKRD20A2Q5SQ80 823 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 ANKRD20A1Q5TYW2 823 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 PLBD2Q8NHP8 589 aa10.5□□□□□ -0.73
CSMD1-217ENST00000602723 IPO11Q9UI26 975 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms