RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 KIF23Q02241 960 aaPredicted RBP20.17■□□□□ 0.82
DDX49-213ENST00000602113 ARMC9Q7Z3E5 817 aa20.17■□□□□ 0.82
DDX49-213ENST00000602113 LPAR1Q92633 364 aa20.17■□□□□ 0.82
DDX49-213ENST00000602113 PHF20Q9BVI0 1012 aa20.17■□□□□ 0.82
DDX49-213ENST00000602113 ZNF408Q9H9D4 720 aa20.17■□□□□ 0.82
DDX49-213ENST00000602113 ELP3Q9H9T3 547 aa20.17■□□□□ 0.82
DDX49-213ENST00000602113 KIF28PB7ZC32 967 aa20.16■□□□□ 0.82
DDX49-213ENST00000602113 LDLRAD1Q5T700 205 aa20.16■□□□□ 0.82
DDX49-213ENST00000602113 SYDE2Q5VT97 1194 aa20.16■□□□□ 0.82
DDX49-213ENST00000602113 TYW1BQ6NUM6 668 aa20.16■□□□□ 0.82
DDX49-213ENST00000602113 FAM173BQ6P4H8 233 aa20.16■□□□□ 0.82
DDX49-213ENST00000602113 HEATR3Q7Z4Q2 680 aa20.16■□□□□ 0.82
DDX49-213ENST00000602113 SEC63Q9UGP8 760 aaKnown RBP20.16■□□□□ 0.82
DDX49-213ENST00000602113 STXBP3O00186 592 aa20.16■□□□□ 0.82
DDX49-213ENST00000602113 PPP1R11O60927 126 aaPredicted RBP20.16■□□□□ 0.82
DDX49-213ENST00000602113 XBP1P17861 261 aa20.16■□□□□ 0.82
DDX49-213ENST00000602113 USP14P54578 494 aa20.16■□□□□ 0.82
DDX49-213ENST00000602113 IKQ13123 557 aaPredicted RBP20.16■□□□□ 0.82
DDX49-213ENST00000602113 ZSCAN16Q9H4T2 348 aaPredicted RBP20.16■□□□□ 0.82
DDX49-213ENST00000602113 BARHL2Q9NY43 387 aa20.16■□□□□ 0.82
DDX49-213ENST00000602113 PNMA6FA0A0J9YX94 578 aa20.15■□□□□ 0.82
DDX49-213ENST00000602113 WDR46O15213 610 aaKnown RBP20.15■□□□□ 0.82
DDX49-213ENST00000602113 STAT2P52630 851 aa20.15■□□□□ 0.82
DDX49-213ENST00000602113 HMGCS2P54868 508 aa20.15■□□□□ 0.82
DDX49-213ENST00000602113 NPY5RQ15761 445 aa20.15■□□□□ 0.82
DDX49-213ENST00000602113 CHADLQ6NUI6 762 aa20.15■□□□□ 0.82
DDX49-213ENST00000602113 SH3GLB2Q9NR46 395 aa20.15■□□□□ 0.82
DDX49-213ENST00000602113 FBXO28Q9NVF7 368 aa20.15■□□□□ 0.82
DDX49-213ENST00000602113 PRR12Q9ULL5 1215 aa20.15■□□□□ 0.82
DDX49-213ENST00000602113 C19orf81C9J6K1 198 aa20.14■□□□□ 0.81
DDX49-213ENST00000602113 ZBTB5O15062 677 aa20.14■□□□□ 0.81
DDX49-213ENST00000602113 PLA2G6O60733 806 aa20.14■□□□□ 0.81
DDX49-213ENST00000602113 ITGBL1O95965 494 aaPredicted RBP20.14■□□□□ 0.81
DDX49-213ENST00000602113 VCAM1P19320 739 aa20.14■□□□□ 0.81
DDX49-213ENST00000602113 SNAP25P60880 206 aa20.14■□□□□ 0.81
DDX49-213ENST00000602113 NFKBIBQ15653 356 aa20.14■□□□□ 0.81
DDX49-213ENST00000602113 DIS3L2Q8IYB7 885 aaKnown RBP20.14■□□□□ 0.81
DDX49-213ENST00000602113 OXER1Q8TDS5 423 aa20.14■□□□□ 0.81
DDX49-213ENST00000602113 C12orf42Q96LP6 360 aa20.14■□□□□ 0.81
DDX49-213ENST00000602113 GBP4Q96PP9 640 aa20.14■□□□□ 0.81
DDX49-213ENST00000602113 ATP6V1DQ9Y5K8 247 aa20.14■□□□□ 0.81
DDX49-213ENST00000602113 SPDYE5A6NIY4 337 aa20.13■□□□□ 0.81
DDX49-213ENST00000602113 BTBD18B2RXH4 712 aa20.13■□□□□ 0.81
DDX49-213ENST00000602113 DNM1Q05193 864 aaKnown RBP20.13■□□□□ 0.81
DDX49-213ENST00000602113 CDC37Q16543 378 aaPredicted RBP20.13■□□□□ 0.81
DDX49-213ENST00000602113 QRICH1Q2TAL8 776 aa20.13■□□□□ 0.81
DDX49-213ENST00000602113 ERO1BQ86YB8 467 aa20.13■□□□□ 0.81
DDX49-213ENST00000602113 CHURC1Q8WUH1 139 aa20.13■□□□□ 0.81
DDX49-213ENST00000602113 FEM1BQ9UK73 627 aa20.13■□□□□ 0.81
DDX49-213ENST00000602113 ADAMTS3O15072 1205 aa20.13■□□□□ 0.81
DDX49-213ENST00000602113 U2AF2P26368 475 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDX49-213ENST00000602113 PPATQ06203 517 aa20.13■□□□□ 0.81
DDX49-213ENST00000602113 SAFBQ15424 915 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDX49-213ENST00000602113 FAM160B2Q86V87 743 aa20.13■□□□□ 0.81
DDX49-213ENST00000602113 OTUD5Q96G74 571 aa20.13■□□□□ 0.81
DDX49-213ENST00000602113 RPAP3Q9H6T3 665 aaPredicted RBP20.13■□□□□ 0.81
DDX49-213ENST00000602113 CELF2O95319 508 aaKnown RBP20.12■□□□□ 0.81
DDX49-213ENST00000602113 MCM4P33991 863 aa20.12■□□□□ 0.81
DDX49-213ENST00000602113 NLRP5P59047 1200 aa20.12■□□□□ 0.81
DDX49-213ENST00000602113 SH3D19Q5HYK7 790 aa20.12■□□□□ 0.81
DDX49-213ENST00000602113 RBM46Q8TBY0 533 aaKnown RBP20.12■□□□□ 0.81
DDX49-213ENST00000602113 KIFC2Q96AC6 838 aa20.12■□□□□ 0.81
DDX49-213ENST00000602113 COA7Q96BR5 231 aa20.12■□□□□ 0.81
DDX49-213ENST00000602113 GBA2Q9HCG7 927 aaPredicted RBP20.12■□□□□ 0.81
DDX49-213ENST00000602113 hCG_1984214I3L0E3 225 aa20.11■□□□□ 0.81
DDX49-213ENST00000602113 IRF6O14896 467 aa20.11■□□□□ 0.81
DDX49-213ENST00000602113 NAPAP54920 295 aa20.11■□□□□ 0.81
DDX49-213ENST00000602113 FKBP1BP68106 108 aa20.11■□□□□ 0.81
DDX49-213ENST00000602113 NR5A1Q13285 461 aa20.11■□□□□ 0.81
DDX49-213ENST00000602113 BRAPQ7Z569 592 aa20.11■□□□□ 0.81
DDX49-213ENST00000602113 ZNF713Q8N859 430 aaPredicted RBP20.11■□□□□ 0.81
DDX49-213ENST00000602113 TANGO6Q9C0B7 1094 aa20.11■□□□□ 0.81
DDX49-213ENST00000602113 FOXP1Q9H334 677 aaPredicted RBP20.11■□□□□ 0.81
DDX49-213ENST00000602113 GPBP1L1Q9HC44 474 aaPredicted RBP20.11■□□□□ 0.81
DDX49-213ENST00000602113 CNPY2Q9Y2B0 182 aa20.11■□□□□ 0.81
DDX49-213ENST00000602113 KRT2P35908 639 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 CST9Q5W186 159 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 FAM177A1Q8N128 213 aaPredicted RBP20.1■□□□□ 0.81
DDX49-213ENST00000602113 CCDC148Q8NFR7 591 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 UNCXA6NJT0 531 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 GJA5P36382 358 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 PPIL2Q13356 520 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
DDX49-213ENST00000602113 NOSTRINQ8IVI9 506 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 TNFRSF25Q93038 417 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 OPTNQ96CV9 577 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 SLF1Q9BQI6 1058 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 ZMYND12Q9H0C1 365 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 RANBP17Q9H2T7 1088 aaKnown RBP20.1■□□□□ 0.81
DDX49-213ENST00000602113 TMOD4Q9NZQ9 345 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 PCDHA4Q9UN74 947 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 KCNH4Q9UQ05 1017 aa20.1■□□□□ 0.81
DDX49-213ENST00000602113 CALML3P27482 149 aa20.09■□□□□ 0.81
DDX49-213ENST00000602113 SAMD1Q6SPF0 538 aaPredicted RBP20.09■□□□□ 0.81
DDX49-213ENST00000602113 C2orf69Q8N8R5 385 aa20.09■□□□□ 0.81
DDX49-213ENST00000602113 DAGLBQ8NCG7 672 aa20.09■□□□□ 0.81
DDX49-213ENST00000602113 CCDC12Q8WUD4 166 aaPredicted RBP20.09■□□□□ 0.81
DDX49-213ENST00000602113 SLC10A4Q96EP9 437 aa20.09■□□□□ 0.81
DDX49-213ENST00000602113 TFIP11Q9UBB9 837 aaKnown RBP20.09■□□□□ 0.81
DDX49-213ENST00000602113 SMCO2A6NFE2 343 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms