RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 GADL1Q6ZQY3 521 aa26.61■■□□□ 1.85
IRF3-227ENST00000600911 ABT1Q9ULW3 272 aaKnown RBP26.61■■□□□ 1.85
IRF3-227ENST00000600911 FAM155AB1AL88 458 aaPredicted RBP26.61■■□□□ 1.85
IRF3-227ENST00000600911 GNAQP50148 359 aa26.61■■□□□ 1.85
IRF3-227ENST00000600911 SSRP1Q08945 709 aaKnown RBP26.61■■□□□ 1.85
IRF3-227ENST00000600911 PKP1Q13835 747 aa26.61■■□□□ 1.85
IRF3-227ENST00000600911 GPAT2Q6NUI2 795 aa26.61■■□□□ 1.85
IRF3-227ENST00000600911 SAMD1Q6SPF0 538 aaPredicted RBP26.61■■□□□ 1.85
IRF3-227ENST00000600911 TMOD4Q9NZQ9 345 aa26.61■■□□□ 1.85
IRF3-227ENST00000600911 PRR12Q9ULL5 1215 aa26.61■■□□□ 1.85
IRF3-227ENST00000600911 STK36Q9NRP7 1315 aa26.6■■□□□ 1.85
IRF3-227ENST00000600911 PRPF3O43395 683 aaKnown RBP26.6■■□□□ 1.85
IRF3-227ENST00000600911 PPP1R11O60927 126 aaPredicted RBP26.6■■□□□ 1.85
IRF3-227ENST00000600911 SYDE2Q5VT97 1194 aa26.6■■□□□ 1.85
IRF3-227ENST00000600911 POTEEQ6S8J3 1075 aa26.6■■□□□ 1.85
IRF3-227ENST00000600911 HOMER1Q86YM7 354 aa26.6■■□□□ 1.85
IRF3-227ENST00000600911 MTMR8Q96EF0 704 aa26.6■■□□□ 1.85
IRF3-227ENST00000600911 RNF26Q9BY78 433 aaPredicted RBP26.6■■□□□ 1.85
IRF3-227ENST00000600911 TANGO6Q9C0B7 1094 aa26.6■■□□□ 1.85
IRF3-227ENST00000600911 STAT2P52630 851 aa26.59■■□□□ 1.85
IRF3-227ENST00000600911 OTUD7BQ6GQQ9 843 aa26.59■■□□□ 1.85
IRF3-227ENST00000600911 ZIC5Q96T25 663 aa26.59■■□□□ 1.85
IRF3-227ENST00000600911 SLC10A3P09131 477 aa26.58■■□□□ 1.85
IRF3-227ENST00000600911 IKQ13123 557 aaPredicted RBP26.58■■□□□ 1.85
IRF3-227ENST00000600911 CPLX2Q6PUV4 134 aaKnown RBP26.58■■□□□ 1.85
IRF3-227ENST00000600911 CATSPERGQ6ZRH7 1159 aa26.58■■□□□ 1.85
IRF3-227ENST00000600911 BRI3BPQ8WY22 251 aa26.58■■□□□ 1.85
IRF3-227ENST00000600911 KIFC2Q96AC6 838 aa26.58■■□□□ 1.85
IRF3-227ENST00000600911 LZTS2Q9BRK4 669 aa26.58■■□□□ 1.85
IRF3-227ENST00000600911 DAXXQ9UER7 740 aaPredicted RBP26.58■■□□□ 1.85
IRF3-227ENST00000600911 CDKL5O76039 1030 aa26.57■■□□□ 1.84
IRF3-227ENST00000600911 HTRA3P83110 453 aa26.57■■□□□ 1.84
IRF3-227ENST00000600911 SNAPC2Q13487 334 aa26.57■■□□□ 1.84
IRF3-227ENST00000600911 TYW1BQ6NUM6 668 aa26.57■■□□□ 1.84
IRF3-227ENST00000600911 PROCA1Q8NCQ7 364 aaPredicted RBP26.57■■□□□ 1.84
IRF3-227ENST00000600911 GPKOWQ92917 476 aaPredicted RBP eCLIP26.57■■□□□ 1.84
IRF3-227ENST00000600911 FEM1BQ9UK73 627 aa26.57■■□□□ 1.84
IRF3-227ENST00000600911 A0A0G2JMZ2 1700 aa26.57■■□□□ 1.84
IRF3-227ENST00000600911 PEX10O60683 326 aa26.57■■□□□ 1.84
IRF3-227ENST00000600911 ZBTB48P10074 688 aaPredicted RBP26.57■■□□□ 1.84
IRF3-227ENST00000600911 SMARCA1P28370 1054 aa26.57■■□□□ 1.84
IRF3-227ENST00000600911 PTPN18Q99952 460 aa26.57■■□□□ 1.84
IRF3-227ENST00000600911 PLA2G6O60733 806 aa26.56■■□□□ 1.84
IRF3-227ENST00000600911 FLOT1O75955 427 aa26.56■■□□□ 1.84
IRF3-227ENST00000600911 APLP1P51693 650 aa26.56■■□□□ 1.84
IRF3-227ENST00000600911 HMGN5P82970 282 aaKnown RBP26.56■■□□□ 1.84
IRF3-227ENST00000600911 ATG4CQ96DT6 458 aa26.56■■□□□ 1.84
IRF3-227ENST00000600911 CCL15-CCL14A0A0B4J2E2 113 aa26.55■■□□□ 1.84
IRF3-227ENST00000600911 ADAMTS3O15072 1205 aa26.55■■□□□ 1.84
IRF3-227ENST00000600911 GUCY1B3Q02153 619 aa26.55■■□□□ 1.84
IRF3-227ENST00000600911 CDC37Q16543 378 aaPredicted RBP26.55■■□□□ 1.84
IRF3-227ENST00000600911 CCL15Q16663 113 aa26.55■■□□□ 1.84
IRF3-227ENST00000600911 QRICH1Q2TAL8 776 aa26.55■■□□□ 1.84
IRF3-227ENST00000600911 CYP4F22Q6NT55 531 aa26.55■■□□□ 1.84
IRF3-227ENST00000600911 SLF1Q9BQI6 1058 aa26.55■■□□□ 1.84
IRF3-227ENST00000600911 ALG1Q9BT22 464 aa26.55■■□□□ 1.84
IRF3-227ENST00000600911 PPP1R9AQ9ULJ8 1098 aa26.55■■□□□ 1.84
IRF3-227ENST00000600911 AGTPBP1Q9UPW5 1226 aa26.55■■□□□ 1.84
IRF3-227ENST00000600911 DEXIO95424 95 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 SYT1P21579 422 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 PFKFB3Q16875 520 aaPredicted RBP26.54■■□□□ 1.84
IRF3-227ENST00000600911 WWC2Q6AWC2 1192 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 TRIM22Q8IYM9 498 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 USP17L15C9J2P7 530 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 BTBD19C9JJ37 291 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 USP17L13C9JLJ4 530 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 USP17L11C9JVI0 530 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 USP17L18D6R9N7 530 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 USP17L22D6RA61 530 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 USP17L17D6RBQ6 530 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 USP17L19D6RCP7 530 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 USP17L20D6RJB6 530 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 GTF2A2P52657 109 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 USP17L24Q0WX57 530 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 FAM160B2Q86V87 743 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 FAM184AQ8NB25 1140 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 CHURC1Q8WUH1 139 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 RANBP17Q9H2T7 1088 aaKnown RBP26.54■■□□□ 1.84
IRF3-227ENST00000600911 VPS54Q9P1Q0 977 aa26.54■■□□□ 1.84
IRF3-227ENST00000600911 SPDYE16A6NNV3 312 aaPredicted RBP26.53■■□□□ 1.84
IRF3-227ENST00000600911 SCG2P13521 617 aa26.53■■□□□ 1.84
IRF3-227ENST00000600911 FAM43AQ8N2R8 423 aa26.53■■□□□ 1.84
IRF3-227ENST00000600911 COA7Q96BR5 231 aa26.53■■□□□ 1.84
IRF3-227ENST00000600911 RRP36Q96EU6 259 aaKnown RBP26.53■■□□□ 1.84
IRF3-227ENST00000600911 CREBZFQ9NS37 354 aa26.53■■□□□ 1.84
IRF3-227ENST00000600911 ZDHHC9Q9Y397 364 aa26.53■■□□□ 1.84
IRF3-227ENST00000600911 ZNF536O15090 1300 aa26.52■■□□□ 1.84
IRF3-227ENST00000600911 ZBTB5O15062 677 aa26.52■■□□□ 1.84
IRF3-227ENST00000600911 HOXA7P31268 230 aaPredicted RBP26.52■■□□□ 1.84
IRF3-227ENST00000600911 DSG3P32926 999 aa26.52■■□□□ 1.84
IRF3-227ENST00000600911 GRM1Q13255 1194 aa26.52■■□□□ 1.84
IRF3-227ENST00000600911 CCDC174Q6PII3 467 aa26.52■■□□□ 1.84
IRF3-227ENST00000600911 REPS2Q8NFH8 660 aa26.52■■□□□ 1.84
IRF3-227ENST00000600911 CETPP11597 493 aa26.51■■□□□ 1.83
IRF3-227ENST00000600911 PRPF38AQ8NAV1 312 aaKnown RBP26.51■■□□□ 1.83
IRF3-227ENST00000600911 HHIPL1Q96JK4 782 aa26.51■■□□□ 1.83
IRF3-227ENST00000600911 P2RX7Q99572 595 aaKnown RBP26.51■■□□□ 1.83
IRF3-227ENST00000600911 ASCC2Q9H1I8 757 aaPredicted RBP26.51■■□□□ 1.83
IRF3-227ENST00000600911 CWC22Q9HCG8 908 aaKnown RBP26.51■■□□□ 1.83
IRF3-227ENST00000600911 ADAMTS5Q9UNA0 930 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms