RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 BTNL9Q6UXG8 535 aa23.76■■□□□ 1.39
PNKP-215ENST00000600910 CHURC1Q8WUH1 139 aa23.76■■□□□ 1.39
PNKP-215ENST00000600910 CAPNS2Q96L46 248 aa23.76■■□□□ 1.39
PNKP-215ENST00000600910 CNTNAP5Q8WYK1 1306 aa23.75■■□□□ 1.39
PNKP-215ENST00000600910 PLA2G6O60733 806 aa23.75■■□□□ 1.39
PNKP-215ENST00000600910 HOXA7P31268 230 aaPredicted RBP23.75■■□□□ 1.39
PNKP-215ENST00000600910 C1QTNF8P60827 252 aa23.75■■□□□ 1.39
PNKP-215ENST00000600910 SAMD1Q6SPF0 538 aaPredicted RBP23.75■■□□□ 1.39
PNKP-215ENST00000600910 FAM160B2Q86V87 743 aa23.75■■□□□ 1.39
PNKP-215ENST00000600910 ADGRF4Q8IZF3 695 aa23.75■■□□□ 1.39
PNKP-215ENST00000600910 NSUN7Q8NE18 718 aaKnown RBP23.75■■□□□ 1.39
PNKP-215ENST00000600910 PHKBQ93100 1093 aa23.75■■□□□ 1.39
PNKP-215ENST00000600910 KIFC2Q96AC6 838 aa23.75■■□□□ 1.39
PNKP-215ENST00000600910 SPZ1Q9BXG8 430 aa23.75■■□□□ 1.39
PNKP-215ENST00000600910 TESPA1A2RU30 521 aaPredicted RBP23.74■■□□□ 1.39
PNKP-215ENST00000600910 BTBD19C9JJ37 291 aa23.74■■□□□ 1.39
PNKP-215ENST00000600910 CDKL5O76039 1030 aa23.74■■□□□ 1.39
PNKP-215ENST00000600910 SMARCA1P28370 1054 aa23.74■■□□□ 1.39
PNKP-215ENST00000600910 SYDE2Q5VT97 1194 aa23.74■■□□□ 1.39
PNKP-215ENST00000600910 SLF1Q9BQI6 1058 aa23.74■■□□□ 1.39
PNKP-215ENST00000600910 LLPHQ9BRT6 129 aaKnown RBP23.74■■□□□ 1.39
PNKP-215ENST00000600910 RIOX1Q9H6W3 641 aa23.74■■□□□ 1.39
PNKP-215ENST00000600910 VAT1LQ9HCJ6 419 aa23.74■■□□□ 1.39
PNKP-215ENST00000600910 PRR12Q9ULL5 1215 aa23.74■■□□□ 1.39
PNKP-215ENST00000600910 PRPF38AQ8NAV1 312 aaKnown RBP23.73■■□□□ 1.39
PNKP-215ENST00000600910 ZIC5Q96T25 663 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 PTPN18Q99952 460 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 PTPDC1A2A3K4 754 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 JAK2O60674 1132 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 SLC4A3P48751 1232 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 NOGQ13253 232 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 PABPC4Q13310 644 aaKnown RBP eCLIP23.73■■□□□ 1.39
PNKP-215ENST00000600910 COG2Q14746 738 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 ANKRD23Q86SG2 305 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 PIBF1Q8WXW3 757 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 SLC26A6Q9BXS9 759 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 JMJD4Q9H9V9 463 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 FOXD4L1Q9NU39 408 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 PPP1R9AQ9ULJ8 1098 aa23.73■■□□□ 1.39
PNKP-215ENST00000600910 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.73■■□□□ 1.39
PNKP-215ENST00000600910 PARP14Q460N5 1801 aa23.72■■□□□ 1.39
PNKP-215ENST00000600910 BAZ2BQ9UIF8 2168 aaKnown RBP23.72■■□□□ 1.39
PNKP-215ENST00000600910 HSP90AA1P07900 732 aaKnown RBP23.72■■□□□ 1.39
PNKP-215ENST00000600910 IRX3P78415 501 aaPredicted RBP23.72■■□□□ 1.39
PNKP-215ENST00000600910 KIF23Q02241 960 aaPredicted RBP23.72■■□□□ 1.39
PNKP-215ENST00000600910 SSRP1Q08945 709 aaKnown RBP23.72■■□□□ 1.39
PNKP-215ENST00000600910 FAM43AQ8N2R8 423 aa23.72■■□□□ 1.39
PNKP-215ENST00000600910 ASCC2Q9H1I8 757 aaPredicted RBP23.72■■□□□ 1.39
PNKP-215ENST00000600910 V9GY48 417 aaPredicted RBP23.72■■□□□ 1.39
PNKP-215ENST00000600910 RLFQ13129 1914 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 hCG_1642624A0A1W2PR95 340 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 PDHXO00330 501 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 AOC2O75106 756 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 FMNL1O95466 1100 aaPredicted RBP23.71■■□□□ 1.39
PNKP-215ENST00000600910 HSPA6P17066 643 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 INHBEP58166 350 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 SREBF2Q12772 1141 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 HOMER1Q86YM7 354 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 TRIM22Q8IYM9 498 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 SPRYD3Q8NCJ5 442 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 SMARCC2Q8TAQ2 1214 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 DDX11Q96FC9 970 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 INTS4Q96HW7 963 aaKnown RBP23.71■■□□□ 1.39
PNKP-215ENST00000600910 RNF26Q9BY78 433 aaPredicted RBP23.71■■□□□ 1.39
PNKP-215ENST00000600910 SLC45A1Q9Y2W3 748 aa23.71■■□□□ 1.39
PNKP-215ENST00000600910 OSBPP22059 807 aa23.7■■□□□ 1.39
PNKP-215ENST00000600910 DSG3P32926 999 aa23.7■■□□□ 1.39
PNKP-215ENST00000600910 SNAP25P60880 206 aa23.7■■□□□ 1.39
PNKP-215ENST00000600910 ATG4CQ96DT6 458 aa23.7■■□□□ 1.39
PNKP-215ENST00000600910 RRP36Q96EU6 259 aaKnown RBP23.7■■□□□ 1.39
PNKP-215ENST00000600910 PIGSQ96S52 555 aa23.7■■□□□ 1.39
PNKP-215ENST00000600910 HOXC10Q9NYD6 342 aa23.7■■□□□ 1.39
PNKP-215ENST00000600910 IGF2BP3O00425 579 aaKnown RBP eCLIP23.7■■□□□ 1.38
PNKP-215ENST00000600910 PRPF3O43395 683 aaKnown RBP23.7■■□□□ 1.38
PNKP-215ENST00000600910 AKAP17AQ02040 695 aaKnown RBP23.7■■□□□ 1.38
PNKP-215ENST00000600910 MTMR8Q96EF0 704 aa23.7■■□□□ 1.38
PNKP-215ENST00000600910 PNMA3Q9UL41 463 aa23.7■■□□□ 1.38
PNKP-215ENST00000600910 SMC3Q9UQE7 1217 aa23.7■■□□□ 1.38
PNKP-215ENST00000600910 MYPNQ86TC9 1320 aa23.69■■□□□ 1.38
PNKP-215ENST00000600910 WDR33Q9C0J8 1336 aaKnown RBP23.69■■□□□ 1.38
PNKP-215ENST00000600910 SPDYE16A6NNV3 312 aaPredicted RBP23.69■■□□□ 1.38
PNKP-215ENST00000600910 FDPSP14324 419 aaKnown RBP23.69■■□□□ 1.38
PNKP-215ENST00000600910 VEGFBP49765 207 aa23.69■■□□□ 1.38
PNKP-215ENST00000600910 CDC37Q16543 378 aaPredicted RBP23.69■■□□□ 1.38
PNKP-215ENST00000600910 P2RX7Q99572 595 aaKnown RBP23.69■■□□□ 1.38
PNKP-215ENST00000600910 ORC3Q9UBD5 711 aaPredicted RBP23.69■■□□□ 1.38
PNKP-215ENST00000600910 STK36Q9NRP7 1315 aa23.68■■□□□ 1.38
PNKP-215ENST00000600910 TM4SF4P48230 202 aa23.68■■□□□ 1.38
PNKP-215ENST00000600910 HMGN5P82970 282 aaKnown RBP23.68■■□□□ 1.38
PNKP-215ENST00000600910 IFNL1Q8IU54 200 aa23.68■■□□□ 1.38
PNKP-215ENST00000600910 RANBP17Q9H2T7 1088 aaKnown RBP23.68■■□□□ 1.38
PNKP-215ENST00000600910 RBM27Q9P2N5 1060 aaKnown RBP23.68■■□□□ 1.38
PNKP-215ENST00000600910 DAXXQ9UER7 740 aaPredicted RBP23.68■■□□□ 1.38
PNKP-215ENST00000600910 SEC63Q9UGP8 760 aaKnown RBP23.68■■□□□ 1.38
PNKP-215ENST00000600910 ADAMTS5Q9UNA0 930 aa23.68■■□□□ 1.38
PNKP-215ENST00000600910 VWA5AO00534 786 aa23.67■■□□□ 1.38
PNKP-215ENST00000600910 ZBTB5O15062 677 aa23.67■■□□□ 1.38
PNKP-215ENST00000600910 CYP2C8P10632 490 aa23.67■■□□□ 1.38
PNKP-215ENST00000600910 GJB2P29033 226 aa23.67■■□□□ 1.38
PNKP-215ENST00000600910 HERVK_113P62684 666 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms