RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 CCNG1P51959 295 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 BPIFB4P59827 614 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 KLC1Q07866 573 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 NUTM2DQ5VT03 806 aaPredicted RBP10.91□□□□□ -0.66
NFKB1-212ENST00000600343 CCDC102BQ68D86 513 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 ILDR1Q86SU0 546 aaPredicted RBP10.91□□□□□ -0.66
NFKB1-212ENST00000600343 HOOK3Q86VS8 718 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 NUTM2AQ8IVF1 878 aaPredicted RBP10.91□□□□□ -0.66
NFKB1-212ENST00000600343 SMYD1Q8NB12 490 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 MLKLQ8NB16 471 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 WHAMMQ8TF30 809 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 RMDN2Q96LZ7 410 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.91□□□□□ -0.662e-7■■□□□ 14.2
NFKB1-212ENST00000600343 TUBGCP4Q9UGJ1 667 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 INO80Q9ULG1 1556 aaPredicted RBP10.91□□□□□ -0.66
NFKB1-212ENST00000600343 MYH15Q9Y2K3 1946 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 PREX1Q8TCU6 1659 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 ZNF18P17022 549 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 FAM133BQ5BKY9 247 aaKnown RBP10.9□□□□□ -0.66
NFKB1-212ENST00000600343 SYNE3Q6ZMZ3 975 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 TRMT44Q8IYL2 757 aaKnown RBP10.9□□□□□ -0.66
NFKB1-212ENST00000600343 CORO1BQ9BR76 489 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 NACA2Q9H009 215 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 VCX3BQ9H321 246 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 VCX3AQ9NNX9 186 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 PHF20L1A8MW92 1017 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 MATR3P43243 847 aaKnown RBP eCLIP10.9□□□□□ -0.66
NFKB1-212ENST00000600343 VAV2P52735 878 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 ATP11AP98196 1134 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 IQCKQ8N0W5 287 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 MAP4K1Q92918 833 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 CCDC51Q96ER9 411 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 TAF1DQ9H5J8 278 aaPredicted RBP10.9□□□□□ -0.66
NFKB1-212ENST00000600343 JADE2Q9NQC1 790 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 UTP6Q9NYH9 597 aaKnown RBP10.9□□□□□ -0.66
NFKB1-212ENST00000600343 KIAA1210Q9ULL0 1709 aa10.9□□□□□ -0.66
NFKB1-212ENST00000600343 PTPDC1A2A3K4 754 aa10.9□□□□□ -0.67
NFKB1-212ENST00000600343 PALM3A6NDB9 673 aaPredicted RBP10.9□□□□□ -0.67
NFKB1-212ENST00000600343 F8VZ95 297 aa10.9□□□□□ -0.67
NFKB1-212ENST00000600343 TMOD1P28289 359 aa10.9□□□□□ -0.67
NFKB1-212ENST00000600343 ERVK-24P63145 666 aa10.9□□□□□ -0.67
NFKB1-212ENST00000600343 KCNJ2P63252 427 aa10.9□□□□□ -0.67
NFKB1-212ENST00000600343 SLC4A8Q2Y0W8 1093 aa10.9□□□□□ -0.67
NFKB1-212ENST00000600343 BICDL1Q6ZP65 573 aa10.9□□□□□ -0.67
NFKB1-212ENST00000600343 MMGT1Q8N4V1 131 aa10.9□□□□□ -0.67
NFKB1-212ENST00000600343 DDX27Q96GQ7 796 aaKnown RBP10.9□□□□□ -0.67
NFKB1-212ENST00000600343 CMA1P23946 247 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 LACTBP83111 547 aaPredicted RBP10.89□□□□□ -0.67
NFKB1-212ENST00000600343 CYP26C1Q6V0L0 522 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 SDR16C5Q8N3Y7 309 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 UBA5Q9GZZ9 404 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 MAST1Q9Y2H9 1570 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 A0A1B0GTH6 734 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 FAM83GA6ND36 823 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 SURF6O75683 361 aaKnown RBP10.89□□□□□ -0.67
NFKB1-212ENST00000600343 YEATS4O95619 227 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 CDC27P30260 824 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 CA8P35219 290 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 SESN3P58005 492 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 CD302Q8IX05 232 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 DHRS1Q96LJ7 313 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 LLPHQ9BRT6 129 aaKnown RBP10.89□□□□□ -0.67
NFKB1-212ENST00000600343 SAMSN1Q9NSI8 373 aaKnown RBP10.89□□□□□ -0.67
NFKB1-212ENST00000600343 NLRP2Q9NX02 1062 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 TBC1D7Q9P0N9 293 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 STIM2Q9P246 746 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 TAF6LQ9Y6J9 622 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 ZMYM6O95789 1325 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 GLRX3O76003 335 aaKnown RBP10.89□□□□□ -0.67
NFKB1-212ENST00000600343 GFPT2O94808 682 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 ALOX15P16050 662 aaPredicted RBP10.89□□□□□ -0.67
NFKB1-212ENST00000600343 ODF2Q5BJF6 829 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 LONP2Q86WA8 852 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 SLF2Q8IX21 1173 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 USHBP1Q8N6Y0 703 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 ZBTB8BQ8NAP8 495 aaPredicted RBP10.89□□□□□ -0.67
NFKB1-212ENST00000600343 ATP11CQ8NB49 1132 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 NSUN7Q8NE18 718 aaKnown RBP10.89□□□□□ -0.67
NFKB1-212ENST00000600343 WDR66Q8TBY9 1149 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 RAPGEF5Q92565 580 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 MTA3Q9BTC8 594 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 HAUS4Q9H6D7 363 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 KCNMB3Q9NPA1 279 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 STK38LQ9Y2H1 464 aa10.89□□□□□ -0.67
NFKB1-212ENST00000600343 A8MUI8 341 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 USO1O60763 962 aaKnown RBP10.88□□□□□ -0.67
NFKB1-212ENST00000600343 FUT4P22083 530 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 USP46P62068 366 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 ADCY1Q08828 1119 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 ZNF365Q70YC5 407 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 RHPN1Q8TCX5 695 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 FBF1Q8TES7 1133 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 SMCR8Q8TEV9 937 aaPredicted RBP10.88□□□□□ -0.67
NFKB1-212ENST00000600343 RIMS2Q9UQ26 1411 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 CEMIPQ8WUJ3 1361 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 CDC42BPBQ9Y5S2 1711 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 hCG_2014768A0A024R1R8 64 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 HIP1RO75146 1068 aa10.88□□□□□ -0.67
NFKB1-212ENST00000600343 ZC3H6P61129 1189 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms