RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 NYAP2Q9P242 653 aa22.5■■□□□ 1.19
FARP1-229ENST00000600190 CLIP2Q9UDT6 1046 aa22.5■■□□□ 1.19
FARP1-229ENST00000600190 PHF24Q9UPV7 400 aa22.5■■□□□ 1.19
FARP1-229ENST00000600190 CNPY2Q9Y2B0 182 aa22.5■■□□□ 1.19
FARP1-229ENST00000600190 TRIM43BA6NCK2 446 aa22.49■■□□□ 1.19
FARP1-229ENST00000600190 RNF113AO15541 343 aaKnown RBP22.49■■□□□ 1.19
FARP1-229ENST00000600190 ZNF865P0CJ78 1059 aaPredicted RBP22.49■■□□□ 1.19
FARP1-229ENST00000600190 TDO2P48775 406 aa22.49■■□□□ 1.19
FARP1-229ENST00000600190 TLE2Q04725 743 aa22.49■■□□□ 1.19
FARP1-229ENST00000600190 C9orf50Q5SZB4 431 aa22.49■■□□□ 1.19
FARP1-229ENST00000600190 C1orf53Q5VUE5 145 aa22.49■■□□□ 1.19
FARP1-229ENST00000600190 ZNF444Q8N0Y2 327 aaPredicted RBP22.49■■□□□ 1.19
FARP1-229ENST00000600190 TRIM43Q96BQ3 446 aaPredicted RBP22.49■■□□□ 1.19
FARP1-229ENST00000600190 DDX11Q96FC9 970 aa22.49■■□□□ 1.19
FARP1-229ENST00000600190 TEX13BQ9BXU2 312 aa22.49■■□□□ 1.19
FARP1-229ENST00000600190 GPAA1O43292 621 aa22.48■■□□□ 1.19
FARP1-229ENST00000600190 NDUFB10O96000 172 aa22.48■■□□□ 1.19
FARP1-229ENST00000600190 AKR1A1P14550 325 aa22.48■■□□□ 1.19
FARP1-229ENST00000600190 CPXCR1Q8N123 301 aa22.48■■□□□ 1.19
FARP1-229ENST00000600190 PRPF38AQ8NAV1 312 aaKnown RBP22.48■■□□□ 1.19
FARP1-229ENST00000600190 LENG1Q96BZ8 264 aaPredicted RBP22.48■■□□□ 1.19
FARP1-229ENST00000600190 GUCD1Q96NT3 240 aa22.48■■□□□ 1.19
FARP1-229ENST00000600190 RIPK3Q9Y572 518 aa22.48■■□□□ 1.19
FARP1-229ENST00000600190 CTDP1Q9Y5B0 961 aaPredicted RBP22.48■■□□□ 1.19
FARP1-229ENST00000600190 GREB1LQ9C091 1923 aaPredicted RBP22.48■■□□□ 1.19
FARP1-229ENST00000600190 EYSQ5T1H1 3165 aa22.47■■□□□ 1.19
FARP1-229ENST00000600190 PRDM1O75626 825 aa22.47■■□□□ 1.19
FARP1-229ENST00000600190 ZFYP08048 801 aaPredicted RBP22.47■■□□□ 1.19
FARP1-229ENST00000600190 ZNF697Q5TEC3 545 aa22.47■■□□□ 1.19
FARP1-229ENST00000600190 EPB41L4AQ9HCS5 686 aaPredicted RBP22.47■■□□□ 1.19
FARP1-229ENST00000600190 TACC3Q9Y6A5 838 aa22.47■■□□□ 1.19
FARP1-229ENST00000600190 A0A1W2PQ45 241 aaPredicted RBP22.46■■□□□ 1.19
FARP1-229ENST00000600190 A0A1W2PQY0 241 aa22.46■■□□□ 1.19
FARP1-229ENST00000600190 M0R2C6 588 aa22.46■■□□□ 1.19
FARP1-229ENST00000600190 ZBED4O75132 1171 aa22.46■■□□□ 1.19
FARP1-229ENST00000600190 GNAT2P19087 354 aa22.46■■□□□ 1.19
FARP1-229ENST00000600190 KIFC2Q96AC6 838 aa22.46■■□□□ 1.19
FARP1-229ENST00000600190 ZNF287Q9HBT7 754 aa22.46■■□□□ 1.19
FARP1-229ENST00000600190 ROBO3Q96MS0 1386 aa22.46■■□□□ 1.19
FARP1-229ENST00000600190 PQBP1O60828 265 aaKnown RBP22.45■■□□□ 1.18
FARP1-229ENST00000600190 CLTBP09497 229 aa22.45■■□□□ 1.18
FARP1-229ENST00000600190 IGKV6D-41A0A0C4DH26 115 aa22.44■■□□□ 1.18
FARP1-229ENST00000600190 PATL2C9JE40 543 aaKnown RBP22.44■■□□□ 1.18
FARP1-229ENST00000600190 SNAI1O95863 264 aaPredicted RBP22.44■■□□□ 1.18
FARP1-229ENST00000600190 ITGB8P26012 769 aa22.44■■□□□ 1.18
FARP1-229ENST00000600190 MSL3Q8N5Y2 521 aaKnown RBP22.44■■□□□ 1.18
FARP1-229ENST00000600190 CEP95Q96GE4 821 aa22.44■■□□□ 1.18
FARP1-229ENST00000600190 RAVER2Q9HCJ3 691 aaKnown RBP22.44■■□□□ 1.18
FARP1-229ENST00000600190 ZHX1Q9UKY1 873 aaPredicted RBP22.44■■□□□ 1.18
FARP1-229ENST00000600190 FAM184BQ9ULE4 1060 aa22.44■■□□□ 1.18
FARP1-229ENST00000600190 MYH4Q9Y623 1939 aa22.43■■□□□ 1.18
FARP1-229ENST00000600190 SYNGAP1Q96PV0 1343 aa22.43■■□□□ 1.18
FARP1-229ENST00000600190 ERC2O15083 957 aa22.43■■□□□ 1.18
FARP1-229ENST00000600190 ADAMTS4O75173 837 aa22.43■■□□□ 1.18
FARP1-229ENST00000600190 LRRFIP1Q32MZ4 808 aaKnown RBP22.43■■□□□ 1.18
FARP1-229ENST00000600190 IFNL3Q8IZI9 196 aa22.43■■□□□ 1.18
FARP1-229ENST00000600190 LRRC47Q8N1G4 583 aaKnown RBP22.43■■□□□ 1.18
FARP1-229ENST00000600190 ANKRD35Q8N283 1001 aa22.43■■□□□ 1.18
FARP1-229ENST00000600190 MKL1Q969V6 931 aa22.43■■□□□ 1.18
FARP1-229ENST00000600190 MTMR4Q9NYA4 1195 aa22.43■■□□□ 1.18
FARP1-229ENST00000600190 SYNRGQ9UMZ2 1314 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 DNAJC25-GNG10A0A024R161 153 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 ATP2A1O14983 1001 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 TTLL1O95922 423 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 RAG1P15918 1043 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 ACLYP53396 1101 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 B4GALNT3Q6L9W6 998 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 MAMDC4Q6UXC1 1216 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 SEC62Q99442 399 aaKnown RBP22.42■■□□□ 1.18
FARP1-229ENST00000600190 TSEN34Q9BSV6 310 aaKnown RBP22.42■■□□□ 1.18
FARP1-229ENST00000600190 NACAP1Q9BZK3 213 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 SLC38A10Q9HBR0 1119 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 STARD7Q9NQZ5 370 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 TMEM39AQ9NV64 488 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 FEM1BQ9UK73 627 aa22.42■■□□□ 1.18
FARP1-229ENST00000600190 ISY1Q9ULR0 285 aaKnown RBP22.42■■□□□ 1.18
FARP1-229ENST00000600190 IGHDP01880 384 aa22.41■■□□□ 1.18
FARP1-229ENST00000600190 TSPY3P0CV98 308 aa22.41■■□□□ 1.18
FARP1-229ENST00000600190 TSPY8P0CW00 308 aa22.41■■□□□ 1.18
FARP1-229ENST00000600190 NUP133Q8WUM0 1156 aa22.41■■□□□ 1.18
FARP1-229ENST00000600190 SEMA6BQ9H3T3 888 aa22.41■■□□□ 1.18
FARP1-229ENST00000600190 CDH23Q9H251 3354 aa22.41■■□□□ 1.18
FARP1-229ENST00000600190 KIAA0355O15063 1070 aa22.4■■□□□ 1.18
FARP1-229ENST00000600190 SMAD3P84022 425 aaKnown RBP22.4■■□□□ 1.18
FARP1-229ENST00000600190 PDE4BQ07343 736 aa22.4■■□□□ 1.18
FARP1-229ENST00000600190 ACVR2BQ13705 512 aa22.4■■□□□ 1.18
FARP1-229ENST00000600190 KCNA10Q16322 511 aa22.4■■□□□ 1.18
FARP1-229ENST00000600190 SLFN13Q68D06 897 aa22.4■■□□□ 1.18
FARP1-229ENST00000600190 ZNF467Q7Z7K2 595 aaPredicted RBP22.4■■□□□ 1.18
FARP1-229ENST00000600190 SMC5Q8IY18 1101 aa22.4■■□□□ 1.18
FARP1-229ENST00000600190 GMCL1P1Q8NEA9 526 aa22.4■■□□□ 1.18
FARP1-229ENST00000600190 CDX2Q99626 313 aaPredicted RBP22.4■■□□□ 1.18
FARP1-229ENST00000600190 FBXO40Q9UH90 709 aa22.4■■□□□ 1.18
FARP1-229ENST00000600190 TTC41PQ6P2S7 1318 aa22.39■■□□□ 1.18
FARP1-229ENST00000600190 MOXD2PA6NHM9 499 aa22.39■■□□□ 1.17
FARP1-229ENST00000600190 DCDC2CA8MYV0 355 aa22.39■■□□□ 1.17
FARP1-229ENST00000600190 DUSP11O75319 330 aaKnown RBP22.39■■□□□ 1.17
FARP1-229ENST00000600190 SLC3A2P08195 630 aaKnown RBP22.39■■□□□ 1.17
FARP1-229ENST00000600190 BMP3P12645 472 aa22.39■■□□□ 1.17
FARP1-229ENST00000600190 EPHB4P54760 987 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms