RNA–Protein interactions for RNA: ENST00000597168.1

SH2D3A-205, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-205ENST00000597168 FOXD4L5Q5VV16 416 aaPredicted RBP13.24□□□□□ -0.29
SH2D3A-205ENST00000597168 OTUD7BQ6GQQ9 843 aa13.24□□□□□ -0.29
SH2D3A-205ENST00000597168 FBXO18Q8NFZ0 1043 aa13.24□□□□□ -0.29
SH2D3A-205ENST00000597168 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
SH2D3A-205ENST00000597168 CHURC1Q8WUH1 139 aa13.24□□□□□ -0.29
SH2D3A-205ENST00000597168 FOXD4L4Q8WXT5 416 aaPredicted RBP13.24□□□□□ -0.29
SH2D3A-205ENST00000597168 MTMR8Q96EF0 704 aa13.24□□□□□ -0.29
SH2D3A-205ENST00000597168 RRP36Q96EU6 259 aaKnown RBP13.24□□□□□ -0.29
SH2D3A-205ENST00000597168 C12orf42Q96LP6 360 aa13.24□□□□□ -0.29
SH2D3A-205ENST00000597168 PIGSQ96S52 555 aa13.24□□□□□ -0.29
SH2D3A-205ENST00000597168 CXCL11O14625 94 aa13.23□□□□□ -0.29
SH2D3A-205ENST00000597168 HMGCS2P54868 508 aa13.23□□□□□ -0.29
SH2D3A-205ENST00000597168 TRIM29Q14134 588 aa13.23□□□□□ -0.29
SH2D3A-205ENST00000597168 SYDE2Q5VT97 1194 aa13.23□□□□□ -0.29
SH2D3A-205ENST00000597168 KRT40Q6A162 431 aa13.23□□□□□ -0.29
SH2D3A-205ENST00000597168 FAM160B2Q86V87 743 aa13.23□□□□□ -0.29
SH2D3A-205ENST00000597168 HOMER1Q86YM7 354 aa13.23□□□□□ -0.29
SH2D3A-205ENST00000597168 OPTNQ96CV9 577 aa13.23□□□□□ -0.29
SH2D3A-205ENST00000597168 TMOD4Q9NZQ9 345 aa13.23□□□□□ -0.29
SH2D3A-205ENST00000597168 FEM1BQ9UK73 627 aa13.23□□□□□ -0.29
SH2D3A-205ENST00000597168 PNMA6FA0A0J9YX94 578 aa13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 IRF6O14896 467 aa13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 XBP1P17861 261 aa13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 STAT2P52630 851 aa13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 IKQ13123 557 aaPredicted RBP13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 PPIL2Q13356 520 aa13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 TNPO1Q92973 898 aaKnown RBP13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 SHISA4Q96DD7 197 aa13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 RPAP3Q9H6T3 665 aaPredicted RBP13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 VPS54Q9P1Q0 977 aa13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 PRR12Q9ULL5 1215 aa13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 KCNH4Q9UQ05 1017 aa13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 BAZ2BQ9UIF8 2168 aaKnown RBP13.22□□□□□ -0.29
SH2D3A-205ENST00000597168 TRPM7Q96QT4 1865 aa13.21□□□□□ -0.29
SH2D3A-205ENST00000597168 PASKQ96RG2 1323 aa13.21□□□□□ -0.29
SH2D3A-205ENST00000597168 ZBTB5O15062 677 aa13.21□□□□□ -0.29
SH2D3A-205ENST00000597168 F13A1P00488 732 aa13.21□□□□□ -0.29
SH2D3A-205ENST00000597168 VCAM1P19320 739 aa13.21□□□□□ -0.29
SH2D3A-205ENST00000597168 GJA5P36382 358 aa13.21□□□□□ -0.29
SH2D3A-205ENST00000597168 SMC1BQ8NDV3 1235 aa13.21□□□□□ -0.29
SH2D3A-205ENST00000597168 SH3GLB2Q9NR46 395 aa13.21□□□□□ -0.29
SH2D3A-205ENST00000597168 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
SH2D3A-205ENST00000597168 KCNJ14Q9UNX9 436 aa13.21□□□□□ -0.29
SH2D3A-205ENST00000597168 A0A0G2JLL6 359 aaPredicted RBP13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 STXBP3O00186 592 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 TOMM70O94826 608 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 MMP1P03956 469 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 NLRP5P59047 1200 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 SNAP25P60880 206 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 RESTQ13127 1097 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 CDC37Q16543 378 aaPredicted RBP13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 QRICH1Q2TAL8 776 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 WWC2Q6AWC2 1192 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 CATSPERGQ6ZRH7 1159 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 HEATR3Q7Z4Q2 680 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 PRRT2Q7Z6L0 340 aaPredicted RBP13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 FERMT3Q86UX7 667 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 PRPF38AQ8NAV1 312 aaKnown RBP13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 PHF20Q9BVI0 1012 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 BARHL2Q9NY43 387 aa13.2□□□□□ -0.3
SH2D3A-205ENST00000597168 USP17L15C9J2P7 530 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 USP17L13C9JLJ4 530 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 USP17L11C9JVI0 530 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 hCG_1984214I3L0E3 225 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 SAFBQ15424 915 aaKnown RBP eCLIP13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 ZNF713Q8N859 430 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 PROCA1Q8NCQ7 364 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 COA7Q96BR5 231 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 SLF1Q9BQI6 1058 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 TANGO6Q9C0B7 1094 aa13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 RANBP17Q9H2T7 1088 aaKnown RBP13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 ZSCAN16Q9H4T2 348 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-205ENST00000597168 CEP350Q5VT06 3117 aa13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 BTBD18B2RXH4 712 aa13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 FLOT1O75955 427 aa13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 NAPAP54920 295 aa13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 HUNKP57058 714 aa13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 COG2Q14746 738 aa13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 GADL1Q6ZQY3 521 aa13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 FASTKD5Q7L8L6 764 aaKnown RBP13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 FBXO11Q86XK2 927 aa13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
SH2D3A-205ENST00000597168 AMNQ9BXJ7 453 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms