RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 H7C1W4 665 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 CXCL11O14625 94 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 EVI5O60447 810 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 C6orf222P0C671 652 aaPredicted RBP12.77□□□□□ -0.37
SEH1L-208ENST00000590843 GIMAP6Q6P9H5 292 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 BRAPQ7Z569 592 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 MROH7-TTC4A0A0A0MT08 1334 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 CALCRLQ16602 461 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 RILPL1Q5EBL4 403 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 FILIP1Q7Z7B0 1213 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 CACTINQ8WUQ7 758 aaKnown RBP12.77□□□□□ -0.37
SEH1L-208ENST00000590843 CELF1Q92879 486 aaKnown RBP12.77□□□□□ -0.37
SEH1L-208ENST00000590843 CCDC113Q9H0I3 377 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 RNF208Q9H0X6 261 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 RNF146Q9NTX7 359 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 IQGAP1P46940 1657 aa12.77□□□□□ -0.37
SEH1L-208ENST00000590843 SMCO2A6NFE2 343 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 CCNT1O60563 726 aaKnown RBP12.76□□□□□ -0.37
SEH1L-208ENST00000590843 OR6J1Q8NGC5 347 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 PGBD4Q96DM1 585 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 BCORL1Q5H9F3 1711 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 UQCRHLA0A096LP55 91 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 XPAP23025 273 aaPredicted RBP12.76□□□□□ -0.37
SEH1L-208ENST00000590843 LIG4P49917 911 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 FAM47AQ5JRC9 791 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 SND1Q7KZF4 910 aaKnown RBP eCLIP12.76□□□□□ -0.37
SEH1L-208ENST00000590843 OATP04181 439 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 NFX1Q12986 1120 aaKnown RBP12.76□□□□□ -0.37
SEH1L-208ENST00000590843 KLHDC4Q8TBB5 520 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 ERCC4Q92889 916 aaPredicted RBP12.76□□□□□ -0.37
SEH1L-208ENST00000590843 TTC14Q96N46 770 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 TEX13BQ9BXU2 312 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 ANO10Q9NW15 660 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 PFASO15067 1338 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 SP3Q02447 781 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 TDRD12Q587J7 1177 aaKnown RBP12.76□□□□□ -0.37
SEH1L-208ENST00000590843 RAB11FIP4Q86YS3 637 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 SCYL3Q8IZE3 742 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 THEM5Q8N1Q8 247 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 CPLX3Q8WVH0 158 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 HINFPQ9BQA5 517 aa12.76□□□□□ -0.37
SEH1L-208ENST00000590843 V9GY48 417 aaPredicted RBP12.76□□□□□ -0.37
SEH1L-208ENST00000590843 KRT19P08727 400 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 MCM7P33993 719 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 DMP1Q13316 513 aaPredicted RBP12.75□□□□□ -0.37
SEH1L-208ENST00000590843 KIAA1328Q86T90 577 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 IPO9Q96P70 1041 aaKnown RBP12.75□□□□□ -0.37
SEH1L-208ENST00000590843 CCDC94Q9BW85 323 aaPredicted RBP12.75□□□□□ -0.37
SEH1L-208ENST00000590843 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
SEH1L-208ENST00000590843 USO1O60763 962 aaKnown RBP12.75□□□□□ -0.37
SEH1L-208ENST00000590843 HMGCS2P54868 508 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 KLHL10Q6JEL2 608 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 ZNF449Q6P9G9 518 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 IQUBQ8NA54 791 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 LARSQ9P2J5 1176 aaKnown RBP12.75□□□□□ -0.37
SEH1L-208ENST00000590843 PALD1Q9ULE6 856 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 SPHKAPQ2M3C7 1700 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 ISCA1Q9BUE6 129 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 LRWD1Q9UFC0 647 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.75□□□□□ -0.37
SEH1L-208ENST00000590843 GCFC2P16383 781 aaKnown RBP12.75□□□□□ -0.37
SEH1L-208ENST00000590843 MECOMQ03112 1051 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 VEPH1Q14D04 833 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 LRRC24Q50LG9 513 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 CHST13Q8NET6 341 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 MMRN2Q9H8L6 949 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 TOPORSQ9NS56 1045 aaPredicted RBP12.75□□□□□ -0.37
SEH1L-208ENST00000590843 SLC12A6Q9UHW9 1150 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 ZNF233A6NK53 670 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 SETQ01105 290 aaPredicted RBP12.75□□□□□ -0.37
SEH1L-208ENST00000590843 CATSPER4Q7RTX7 472 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 CCDC112Q8NEF3 446 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 MROH8Q9H579 483 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 LMCD1Q9NZU5 365 aa12.75□□□□□ -0.37
SEH1L-208ENST00000590843 SLU7O95391 586 aaKnown RBP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 ABL1P00519 1130 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 SFSWAPQ12872 951 aaKnown RBP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 ITPK1Q13572 414 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 SURF1Q15526 300 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 CC2D1AQ6P1N0 951 aaPredicted RBP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 SAMD7Q7Z3H4 446 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 GSDMBQ8TAX9 411 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 EDC3Q96F86 508 aaKnown RBP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 HESX1Q9UBX0 185 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 PKN2Q16513 984 aaKnown RBP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 FAM102BQ5T8I3 360 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 MAP3K20Q9NYL2 800 aaKnown RBP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 FRMPD2Q68DX3 1309 aaPredicted RBP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 TRERF1Q96PN7 1200 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 ESYT1Q9BSJ8 1104 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 SEPT9Q9UHD8 586 aaPredicted RBP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 ATP11BQ9Y2G3 1177 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 UBN2Q6ZU65 1347 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 TRAPPC3O43617 180 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 SFPQP23246 707 aaKnown RBP eCLIP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 JAK3P52333 1124 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 CTDSPL2Q05D32 466 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 CCDC14Q49A88 953 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms