RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, human

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF397-208	ENST00000590470	HEATR3	Q7Z4Q2	680 aa		10.85	□□□□□ -0.67
ZNF397-208	ENST00000590470	ERO1B	Q86YB8	467 aa		10.85	□□□□□ -0.67
ZNF397-208	ENST00000590470	TRIM22	Q8IYM9	498 aa		10.85	□□□□□ -0.67
ZNF397-208	ENST00000590470	GMCL1	Q96IK5	515 aa		10.85	□□□□□ -0.67
ZNF397-208	ENST00000590470	WNK4	Q96J92	1243 aa		10.85	□□□□□ -0.67
ZNF397-208	ENST00000590470	RNF26	Q9BY78	433 aa	Predicted RBP	10.85	□□□□□ -0.67
ZNF397-208	ENST00000590470	SH2D4A	Q9H788	454 aa		10.85	□□□□□ -0.67
ZNF397-208	ENST00000590470	CWC22	Q9HCG8	908 aa	Known RBP	10.85	□□□□□ -0.67
ZNF397-208	ENST00000590470	GINM1	Q9NU53	330 aa		10.85	□□□□□ -0.67
ZNF397-208	ENST00000590470	CHMP5	Q9NZZ3	219 aa		10.85	□□□□□ -0.67
ZNF397-208	ENST00000590470	PASK	Q96RG2	1323 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	STK36	Q9NRP7	1315 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	SPDYE5	A6NIY4	337 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470		H3BQV1	296 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	DEXI	O95424	95 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	GNAQ	P50148	359 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	HMGN5	P82970	282 aa	Known RBP	10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	PPAT	Q06203	517 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	GRM1	Q13255	1194 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	QRICH1	Q2TAL8	776 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	NOM1	Q5C9Z4	860 aa	Known RBP	10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	GPATCH4	Q5T3I0	446 aa	Known RBP	10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	IFFO2	Q5TF58	517 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	SYDE2	Q5VT97	1194 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	KRT40	Q6A162	431 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	WWC2	Q6AWC2	1192 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	MCTP1	Q6DN14	999 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	OXER1	Q8TDS5	423 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	RRP36	Q96EU6	259 aa	Known RBP	10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	C8orf76	Q96K31	380 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	SPZ1	Q9BXG8	430 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	RIOX1	Q9H6W3	641 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	TMOD4	Q9NZQ9	345 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	PRR12	Q9ULL5	1215 aa		10.84	□□□□□ -0.67
ZNF397-208	ENST00000590470	KIF28P	B7ZC32	967 aa		10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	FLOT1	O75955	427 aa		10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	BRD1	O95696	1058 aa		10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	ZSCAN22	P10073	491 aa	Predicted RBP	10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	SCG2	P13521	617 aa		10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	STAT2	P52630	851 aa		10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	MOGS	Q13724	837 aa		10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	PPP2R5B	Q15173	497 aa		10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	CDC37	Q16543	378 aa	Predicted RBP	10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	PFKFB3	Q16875	520 aa	Predicted RBP	10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	USH1G	Q495M9	461 aa		10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	SMC1B	Q8NDV3	1235 aa		10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	LZTS2	Q9BRK4	669 aa		10.83	□□□□□ -0.68
ZNF397-208	ENST00000590470	FAM205C	A6NFA0	338 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	C19orf81	C9J6K1	198 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	STXBP3	O00186	592 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	WDR46	O15213	610 aa	Known RBP	10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	TOMM70	O94826	608 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	ZNF157	P51786	506 aa	Predicted RBP	10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	USP14	P54578	494 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	PPIL2	Q13356	520 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	SH3D19	Q5HYK7	790 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	RASGRP4	Q8TDF6	673 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	TNPO1	Q92973	898 aa	Known RBP	10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	ATG4C	Q96DT6	458 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	SEC63	Q9UGP8	760 aa	Known RBP	10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	FEM1B	Q9UK73	627 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	ABT1	Q9ULW3	272 aa	Known RBP	10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	SYNPO2	Q9UMS6	1093 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470	TCHH	Q07283	1943 aa		10.82	□□□□□ -0.68
ZNF397-208	ENST00000590470		A0A0G2JLL6	359 aa	Predicted RBP	10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	PNMA6F	A0A0J9YX94	578 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	BTBD18	B2RXH4	712 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	ZBTB5	O15062	677 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	F13A1	P00488	732 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	NAPA	P54920	295 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	NLRP5	P59047	1200 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	FKBP1B	P68106	108 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	HTRA3	P83110	453 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	REST	Q13127	1097 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	NR5A1	Q13285	461 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	TRIM29	Q14134	588 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	TPRN	Q4KMQ1	711 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	EARS2	Q5JPH6	523 aa	Known RBP	10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	POTEE	Q6S8J3	1075 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	BTNL9	Q6UXG8	535 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	CATSPERG	Q6ZRH7	1159 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	SAPCD2	Q86UD0	394 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	RASAL3	Q86YV0	1011 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	CPXCR1	Q8N123	301 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	FBXO18	Q8NFZ0	1043 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	RBM46	Q8TBY0	533 aa	Known RBP	10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	LPAR1	Q92633	364 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	MTMR8	Q96EF0	704 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	C12orf42	Q96LP6	360 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	AGBL1	Q96MI9	1066 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	SLF1	Q9BQI6	1058 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	RAVER2	Q9HCJ3	691 aa	Known RBP	10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	TMEM260	Q9NX78	707 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	KCNH4	Q9UQ05	1017 aa		10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	WDR33	Q9C0J8	1336 aa	Known RBP	10.81	□□□□□ -0.68
ZNF397-208	ENST00000590470	CCL15-CCL14	A0A0B4J2E2	113 aa		10.8	□□□□□ -0.68
ZNF397-208	ENST00000590470	PDC	P20941	246 aa		10.8	□□□□□ -0.68
ZNF397-208	ENST00000590470	SMARCA1	P28370	1054 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms