RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 WDR46O15213 610 aaKnown RBP28.61■■■□□ 2.17
RFX1-205ENST00000589239 STAT2P52630 851 aa28.61■■■□□ 2.17
RFX1-205ENST00000589239 FOXD4L5Q5VV16 416 aaPredicted RBP28.61■■■□□ 2.17
RFX1-205ENST00000589239 RBM46Q8TBY0 533 aaKnown RBP28.61■■■□□ 2.17
RFX1-205ENST00000589239 FOXD4L4Q8WXT5 416 aaPredicted RBP28.61■■■□□ 2.17
RFX1-205ENST00000589239 WASF1Q92558 559 aa28.61■■■□□ 2.17
RFX1-205ENST00000589239 C8orf76Q96K31 380 aa28.61■■■□□ 2.17
RFX1-205ENST00000589239 NUCB2P80303 420 aa28.61■■■□□ 2.17
RFX1-205ENST00000589239 ZNF784Q8NCA9 323 aaPredicted RBP28.61■■■□□ 2.17
RFX1-205ENST00000589239 RRP36Q96EU6 259 aaKnown RBP28.61■■■□□ 2.17
RFX1-205ENST00000589239 PFKFB3Q16875 520 aaPredicted RBP28.6■■■□□ 2.17
RFX1-205ENST00000589239 BTNL9Q6UXG8 535 aa28.6■■■□□ 2.17
RFX1-205ENST00000589239 C12orf42Q96LP6 360 aa28.6■■■□□ 2.17
RFX1-205ENST00000589239 FBXO28Q9NVF7 368 aa28.6■■■□□ 2.17
RFX1-205ENST00000589239 RBM27Q9P2N5 1060 aaKnown RBP28.6■■■□□ 2.17
RFX1-205ENST00000589239 MTMR6Q9Y217 621 aa28.6■■■□□ 2.17
RFX1-205ENST00000589239 H3BQV1 296 aa28.6■■■□□ 2.17
RFX1-205ENST00000589239 TOMM70O94826 608 aa28.6■■■□□ 2.17
RFX1-205ENST00000589239 SCG2P13521 617 aa28.6■■■□□ 2.17
RFX1-205ENST00000589239 PPIL2Q13356 520 aa28.6■■■□□ 2.17
RFX1-205ENST00000589239 IFFO2Q5TF58 517 aa28.6■■■□□ 2.17
RFX1-205ENST00000589239 RPAP3Q9H6T3 665 aaPredicted RBP28.6■■■□□ 2.17
RFX1-205ENST00000589239 BRD1O95696 1058 aa28.59■■■□□ 2.17
RFX1-205ENST00000589239 GJA5P36382 358 aa28.59■■■□□ 2.17
RFX1-205ENST00000589239 SH3D19Q5HYK7 790 aa28.59■■■□□ 2.17
RFX1-205ENST00000589239 SYDE2Q5VT97 1194 aa28.59■■■□□ 2.17
RFX1-205ENST00000589239 TMOD4Q9NZQ9 345 aa28.59■■■□□ 2.17
RFX1-205ENST00000589239 SEC63Q9UGP8 760 aaKnown RBP28.59■■■□□ 2.17
RFX1-205ENST00000589239 TRPM7Q96QT4 1865 aa28.59■■■□□ 2.17
RFX1-205ENST00000589239 MYH6P13533 1939 aa28.59■■■□□ 2.17
RFX1-205ENST00000589239 FBXO18Q8NFZ0 1043 aa28.58■■■□□ 2.17
RFX1-205ENST00000589239 GPKOWQ92917 476 aaPredicted RBP eCLIP28.58■■■□□ 2.17
RFX1-205ENST00000589239 TANGO6Q9C0B7 1094 aa28.58■■■□□ 2.17
RFX1-205ENST00000589239 HUNKP57058 714 aa28.58■■■□□ 2.17
RFX1-205ENST00000589239 SAMD1Q6SPF0 538 aaPredicted RBP28.58■■■□□ 2.17
RFX1-205ENST00000589239 SHISA4Q96DD7 197 aa28.58■■■□□ 2.17
RFX1-205ENST00000589239 VPS54Q9P1Q0 977 aa28.58■■■□□ 2.17
RFX1-205ENST00000589239 PRR12Q9ULL5 1215 aa28.58■■■□□ 2.17
RFX1-205ENST00000589239 KIFC2Q96AC6 838 aa28.57■■■□□ 2.16
RFX1-205ENST00000589239 MTMR8Q96EF0 704 aa28.57■■■□□ 2.16
RFX1-205ENST00000589239 FEM1BQ9UK73 627 aa28.57■■■□□ 2.16
RFX1-205ENST00000589239 KCNH4Q9UQ05 1017 aa28.57■■■□□ 2.16
RFX1-205ENST00000589239 WDR33Q9C0J8 1336 aaKnown RBP28.57■■■□□ 2.16
RFX1-205ENST00000589239 CXCL11O14625 94 aa28.57■■■□□ 2.16
RFX1-205ENST00000589239 SNAP25P60880 206 aa28.57■■■□□ 2.16
RFX1-205ENST00000589239 CHURC1Q8WUH1 139 aa28.57■■■□□ 2.16
RFX1-205ENST00000589239 A0A0G2JLL6 359 aaPredicted RBP28.56■■■□□ 2.16
RFX1-205ENST00000589239 KRT40Q6A162 431 aa28.56■■■□□ 2.16
RFX1-205ENST00000589239 HEATR3Q7Z4Q2 680 aa28.56■■■□□ 2.16
RFX1-205ENST00000589239 PRRT2Q7Z6L0 340 aaPredicted RBP28.56■■■□□ 2.16
RFX1-205ENST00000589239 PLA2G6O60733 806 aa28.55■■■□□ 2.16
RFX1-205ENST00000589239 ZSCAN22P10073 491 aaPredicted RBP28.55■■■□□ 2.16
RFX1-205ENST00000589239 TRIM29Q14134 588 aa28.55■■■□□ 2.16
RFX1-205ENST00000589239 WWC2Q6AWC2 1192 aa28.55■■■□□ 2.16
RFX1-205ENST00000589239 KCNJ14Q9UNX9 436 aa28.55■■■□□ 2.16
RFX1-205ENST00000589239 PTPRFP10586 1907 aa28.55■■■□□ 2.16
RFX1-205ENST00000589239 ZBTB5O15062 677 aa28.55■■■□□ 2.16
RFX1-205ENST00000589239 CDC37Q16543 378 aaPredicted RBP28.55■■■□□ 2.16
RFX1-205ENST00000589239 FAM160B2Q86V87 743 aa28.55■■■□□ 2.16
RFX1-205ENST00000589239 PNMA6FA0A0J9YX94 578 aa28.54■■■□□ 2.16
RFX1-205ENST00000589239 FLOT1O75955 427 aa28.54■■■□□ 2.16
RFX1-205ENST00000589239 PDIA4P13667 645 aaKnown RBP28.54■■■□□ 2.16
RFX1-205ENST00000589239 MKRN3Q13064 507 aaKnown RBP28.54■■■□□ 2.16
RFX1-205ENST00000589239 TREML2Q5T2D2 321 aa28.54■■■□□ 2.16
RFX1-205ENST00000589239 FERMT3Q86UX7 667 aa28.54■■■□□ 2.16
RFX1-205ENST00000589239 PPP1R11O60927 126 aaPredicted RBP28.54■■■□□ 2.16
RFX1-205ENST00000589239 QRICH1Q2TAL8 776 aa28.54■■■□□ 2.16
RFX1-205ENST00000589239 TYW1BQ6NUM6 668 aa28.54■■■□□ 2.16
RFX1-205ENST00000589239 WNK4Q96J92 1243 aa28.54■■■□□ 2.16
RFX1-205ENST00000589239 SLF1Q9BQI6 1058 aa28.54■■■□□ 2.16
RFX1-205ENST00000589239 XBP1P17861 261 aa28.53■■■□□ 2.16
RFX1-205ENST00000589239 GADL1Q6ZQY3 521 aa28.53■■■□□ 2.16
RFX1-205ENST00000589239 SAPCD2Q86UD0 394 aa28.53■■■□□ 2.16
RFX1-205ENST00000589239 BARHL2Q9NY43 387 aa28.53■■■□□ 2.16
RFX1-205ENST00000589239 STXBP3O00186 592 aa28.52■■■□□ 2.16
RFX1-205ENST00000589239 MCTP1Q6DN14 999 aa28.52■■■□□ 2.16
RFX1-205ENST00000589239 PRPF38AQ8NAV1 312 aaKnown RBP28.52■■■□□ 2.16
RFX1-205ENST00000589239 PROCA1Q8NCQ7 364 aaPredicted RBP28.51■■■□□ 2.15
RFX1-205ENST00000589239 COA7Q96BR5 231 aa28.51■■■□□ 2.15
RFX1-205ENST00000589239 F13A1P00488 732 aa28.51■■■□□ 2.15
RFX1-205ENST00000589239 SNAPC2Q13487 334 aa28.51■■■□□ 2.15
RFX1-205ENST00000589239 CATSPERGQ6ZRH7 1159 aa28.51■■■□□ 2.15
RFX1-205ENST00000589239 TNPO1Q92973 898 aaKnown RBP28.51■■■□□ 2.15
RFX1-205ENST00000589239 PPP1R9AQ9ULJ8 1098 aa28.51■■■□□ 2.15
RFX1-205ENST00000589239 MMP1P03956 469 aa28.5■■■□□ 2.15
RFX1-205ENST00000589239 MOGSQ13724 837 aa28.5■■■□□ 2.15
RFX1-205ENST00000589239 PHF20Q9BVI0 1012 aa28.5■■■□□ 2.15
RFX1-205ENST00000589239 RANBP17Q9H2T7 1088 aaKnown RBP28.5■■■□□ 2.15
RFX1-205ENST00000589239 USP17L15C9J2P7 530 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 USP17L13C9JLJ4 530 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 USP17L11C9JVI0 530 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 USP17L18D6R9N7 530 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 USP17L22D6RA61 530 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 USP17L17D6RBQ6 530 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 USP17L19D6RCP7 530 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 USP17L20D6RJB6 530 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 NAPAP54920 295 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 USP17L24Q0WX57 530 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 SPRYD7Q5W111 196 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 RGS22Q8NE09 1264 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms