RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 RIOX2Q8IUF8 465 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 TET1Q8NFU7 2136 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 HERVK_113Q902F9 699 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 RIOK1Q9BRS2 568 aaKnown RBP9.39□□□□□ -0.91
NFIX-211ENST00000588680 MTIF3Q9H2K0 278 aaKnown RBP9.39□□□□□ -0.91
NFIX-211ENST00000588680 EPHX3Q9H6B9 360 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 ANTXR1Q9H6X2 564 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 SH2D4AQ9H788 454 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 VCPKMTQ9H867 229 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 ARHGEF10LQ9HCE6 1279 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 IL23AQ9NPF7 189 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 MCM9Q9NXL9 1143 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 FAM184BQ9ULE4 1060 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 LCTP09848 1927 aa9.39□□□□□ -0.91
NFIX-211ENST00000588680 UMODL1Q5DID0 1318 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 ZNF318Q5VUA4 2279 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 MAGEB6P1A0A0J9YX57 407 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 ARVCFO00192 962 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 TLR3O15455 904 aaKnown RBP9.38□□□□□ -0.91
NFIX-211ENST00000588680 ADCY6O43306 1168 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 DUSP11O75319 330 aaKnown RBP9.38□□□□□ -0.91
NFIX-211ENST00000588680 ASGR1P07306 291 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 CT47B1P0C2W7 299 aaPredicted RBP9.38□□□□□ -0.91
NFIX-211ENST00000588680 CDK7P50613 346 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 RABGGTBP53611 331 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 POLA2Q14181 598 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 SKIV2LQ15477 1246 aaKnown RBP9.38□□□□□ -0.91
NFIX-211ENST00000588680 AAK1Q2M2I8 961 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 UPF3AQ9H1J1 476 aaKnown RBP9.38□□□□□ -0.91
NFIX-211ENST00000588680 ZNF214Q9UL59 606 aaPredicted RBP9.38□□□□□ -0.91
NFIX-211ENST00000588680 ADAMTS5Q9UNA0 930 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 TNNQ9UQP3 1299 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 TMX2Q9Y320 296 aa9.38□□□□□ -0.91
NFIX-211ENST00000588680 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
NFIX-211ENST00000588680 FAM86C2PA6NEL3 165 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 VWA5AO00534 786 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 ERC2O15083 957 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 SNAI1O95863 264 aaPredicted RBP9.37□□□□□ -0.91
NFIX-211ENST00000588680 MYOGP15173 224 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 COPB2P35606 906 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 STAT3P40763 770 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 RARSP54136 660 aaKnown RBP9.37□□□□□ -0.91
NFIX-211ENST00000588680 TMEM31Q5JXX7 168 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 OTOP2Q7RTS6 562 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 SIAH1Q8IUQ4 282 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 TRMT2AQ8IZ69 625 aaKnown RBP9.37□□□□□ -0.91
NFIX-211ENST00000588680 MSL3Q8N5Y2 521 aaKnown RBP9.37□□□□□ -0.91
NFIX-211ENST00000588680 PCSK9Q8NBP7 692 aaKnown RBP9.37□□□□□ -0.91
NFIX-211ENST00000588680 REPS2Q8NFH8 660 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 SDR42E1Q8WUS8 393 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 ARHGAP45Q92619 1136 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 VTI1AQ96AJ9 217 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 DYNLL2Q96FJ2 89 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 CRNKL1Q9BZJ0 848 aaKnown RBP9.37□□□□□ -0.91
NFIX-211ENST00000588680 CCDC8Q9H0W5 538 aaPredicted RBP9.37□□□□□ -0.91
NFIX-211ENST00000588680 PPP1R9AQ9ULJ8 1098 aa9.37□□□□□ -0.91
NFIX-211ENST00000588680 TRIP12Q14669 1992 aaPredicted RBP9.37□□□□□ -0.91
NFIX-211ENST00000588680 ZDBF2Q9HCK1 2354 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 SURF6O75683 361 aaKnown RBP9.36□□□□□ -0.91
NFIX-211ENST00000588680 CD4P01730 458 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 FGBP02675 491 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 TRIM27P14373 513 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 PDE6AP16499 860 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 GNASQ5JWF2 1037 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 FAM83BQ5T0W9 1011 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 SNRNP48Q6IEG0 339 aaKnown RBP9.36□□□□□ -0.91
NFIX-211ENST00000588680 LCORLQ8N3X6 602 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 EAF2Q96CJ1 260 aaPredicted RBP9.36□□□□□ -0.91
NFIX-211ENST00000588680 HIPK3Q9H422 1215 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 DCP1AQ9NPI6 582 aaPredicted RBP9.36□□□□□ -0.91
NFIX-211ENST00000588680 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.36□□□□□ -0.91
NFIX-211ENST00000588680 SWAP70Q9UH65 585 aa9.36□□□□□ -0.91
NFIX-211ENST00000588680 DNAJC25-GNG10A0A024R161 153 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 EPOPA6NHQ4 379 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 SMIM22K7EJ46 135 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 RFXAPO00287 272 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 CTAGE5O15320 804 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 RAD21O60216 631 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 BCAR3O75815 825 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 EEF2P13639 858 aaKnown RBP9.35□□□□□ -0.91
NFIX-211ENST00000588680 CCL23P55773 120 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 GJA9P57773 515 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 BEX3Q00994 111 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 ACVR2BQ13705 512 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 CCDC144BQ3MJ40 725 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 KRT40Q6A162 431 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 TMED8Q6PL24 325 aaPredicted RBP9.35□□□□□ -0.91
NFIX-211ENST00000588680 MAMDC4Q6UXC1 1216 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 SSH3Q8TE77 659 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 KHSRPQ92945 711 aaKnown RBP eCLIP9.35□□□□□ -0.91
NFIX-211ENST00000588680 DDX11Q96FC9 970 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 FGD4Q96M96 766 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 NOC4LQ9BVI4 516 aaKnown RBP9.35□□□□□ -0.91
NFIX-211ENST00000588680 TEX13BQ9BXU2 312 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 WNT8AQ9H1J5 351 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 C1orf115Q9H7X2 142 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 SPC25Q9HBM1 224 aa9.35□□□□□ -0.91
NFIX-211ENST00000588680 PCDHA11Q9Y5I1 949 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms