RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ZKSCAN1P17029 563 aaPredicted RBP23.68■■□□□ 1.38
DDX39A-207ENST00000588542 MCM5P33992 734 aa23.68■■□□□ 1.38
DDX39A-207ENST00000588542 PLS1Q14651 629 aa23.68■■□□□ 1.38
DDX39A-207ENST00000588542 GPR142Q7Z601 462 aa23.68■■□□□ 1.38
DDX39A-207ENST00000588542 ABHD8Q96I13 439 aa23.68■■□□□ 1.38
DDX39A-207ENST00000588542 MTA3Q9BTC8 594 aa23.68■■□□□ 1.38
DDX39A-207ENST00000588542 GPCPD1Q9NPB8 672 aa23.68■■□□□ 1.38
DDX39A-207ENST00000588542 GPHNQ9NQX3 736 aaPredicted RBP23.68■■□□□ 1.38
DDX39A-207ENST00000588542 SNX14Q9Y5W7 946 aa23.68■■□□□ 1.38
DDX39A-207ENST00000588542 ZNF236Q9UL36 1845 aa23.68■■□□□ 1.38
DDX39A-207ENST00000588542 ERICH2A1L162 156 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 FLT3LGP49771 235 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 IKQ13123 557 aaPredicted RBP23.67■■□□□ 1.38
DDX39A-207ENST00000588542 WTAPQ15007 396 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 SART3Q15020 963 aaKnown RBP23.67■■□□□ 1.38
DDX39A-207ENST00000588542 TMEM67Q5HYA8 995 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 PLEKHH3Q7Z736 793 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 SHCBP1Q8NEM2 672 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 NEK1Q96PY6 1258 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 LY9Q9HBG7 655 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 PRR12Q9ULL5 1215 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 GTF3C3Q9Y5Q9 886 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 MYH6P13533 1939 aa23.67■■□□□ 1.38
DDX39A-207ENST00000588542 ATP2A1O14983 1001 aa23.66■■□□□ 1.38
DDX39A-207ENST00000588542 ZBED4O75132 1171 aa23.66■■□□□ 1.38
DDX39A-207ENST00000588542 ERCC3P19447 782 aa23.66■■□□□ 1.38
DDX39A-207ENST00000588542 SLC16A2P36021 539 aa23.66■■□□□ 1.38
DDX39A-207ENST00000588542 STAT3P40763 770 aa23.66■■□□□ 1.38
DDX39A-207ENST00000588542 KRT32Q14532 448 aa23.66■■□□□ 1.38
DDX39A-207ENST00000588542 RIOX2Q8IUF8 465 aa23.66■■□□□ 1.38
DDX39A-207ENST00000588542 CCAR1Q8IX12 1150 aaKnown RBP23.66■■□□□ 1.38
DDX39A-207ENST00000588542 SH2B2O14492 632 aaPredicted RBP23.65■■□□□ 1.38
DDX39A-207ENST00000588542 GOLGA8HP0CJ92 632 aa23.65■■□□□ 1.38
DDX39A-207ENST00000588542 FDX1P10109 184 aa23.65■■□□□ 1.38
DDX39A-207ENST00000588542 EXOSC10Q01780 885 aaKnown RBP23.65■■□□□ 1.38
DDX39A-207ENST00000588542 IRF5Q13568 498 aa23.65■■□□□ 1.38
DDX39A-207ENST00000588542 MORN1Q5T089 497 aa23.65■■□□□ 1.38
DDX39A-207ENST00000588542 GPATCH4Q5T3I0 446 aaKnown RBP23.65■■□□□ 1.38
DDX39A-207ENST00000588542 USP6NLQ92738 828 aa23.65■■□□□ 1.38
DDX39A-207ENST00000588542 TMEM87BQ96K49 555 aa23.65■■□□□ 1.38
DDX39A-207ENST00000588542 PLXNA1Q9UIW2 1896 aa23.64■■□□□ 1.38
DDX39A-207ENST00000588542 ZNF536O15090 1300 aa23.64■■□□□ 1.38
DDX39A-207ENST00000588542 SLC25A27O95847 323 aa23.64■■□□□ 1.37
DDX39A-207ENST00000588542 PTPREP23469 700 aa23.64■■□□□ 1.37
DDX39A-207ENST00000588542 SYDE2Q5VT97 1194 aa23.64■■□□□ 1.37
DDX39A-207ENST00000588542 WDR78Q5VTH9 848 aa23.64■■□□□ 1.37
DDX39A-207ENST00000588542 RAET1EQ8TD07 263 aa23.64■■□□□ 1.37
DDX39A-207ENST00000588542 TEX13BQ9BXU2 312 aa23.64■■□□□ 1.37
DDX39A-207ENST00000588542 LRRC2Q9BYS8 371 aa23.64■■□□□ 1.37
DDX39A-207ENST00000588542 RAVER2Q9HCJ3 691 aaKnown RBP23.64■■□□□ 1.37
DDX39A-207ENST00000588542 WDR19Q8NEZ3 1342 aa23.63■■□□□ 1.37
DDX39A-207ENST00000588542 OAZ1P54368 228 aa23.63■■□□□ 1.37
DDX39A-207ENST00000588542 SNAP25P60880 206 aa23.63■■□□□ 1.37
DDX39A-207ENST00000588542 TROAPQ12815 778 aa23.63■■□□□ 1.37
DDX39A-207ENST00000588542 ASPRV1Q53RT3 343 aa23.63■■□□□ 1.37
DDX39A-207ENST00000588542 SNRNP48Q6IEG0 339 aaKnown RBP23.63■■□□□ 1.37
DDX39A-207ENST00000588542 NCAPG2Q86XI2 1143 aa23.63■■□□□ 1.37
DDX39A-207ENST00000588542 CPXCR1Q8N123 301 aa23.63■■□□□ 1.37
DDX39A-207ENST00000588542 MROH8Q9H579 483 aa23.63■■□□□ 1.37
DDX39A-207ENST00000588542 RIPK3Q9Y572 518 aa23.63■■□□□ 1.37
DDX39A-207ENST00000588542 SLC15A5A6NIM6 579 aa23.62■■□□□ 1.37
DDX39A-207ENST00000588542 SEC24BO95487 1268 aa23.62■■□□□ 1.37
DDX39A-207ENST00000588542 LIFRP42702 1097 aa23.62■■□□□ 1.37
DDX39A-207ENST00000588542 GRB14Q14449 540 aa23.62■■□□□ 1.37
DDX39A-207ENST00000588542 DHX32Q7L7V1 743 aaKnown RBP23.62■■□□□ 1.37
DDX39A-207ENST00000588542 STAG2Q8N3U4 1231 aa23.62■■□□□ 1.37
DDX39A-207ENST00000588542 SOCS4Q8WXH5 440 aa23.62■■□□□ 1.37
DDX39A-207ENST00000588542 NUDT12Q9BQG2 462 aa23.62■■□□□ 1.37
DDX39A-207ENST00000588542 UBA5Q9GZZ9 404 aa23.62■■□□□ 1.37
DDX39A-207ENST00000588542 RANBP17Q9H2T7 1088 aaKnown RBP23.62■■□□□ 1.37
DDX39A-207ENST00000588542 CPVLQ9H3G5 476 aa23.62■■□□□ 1.37
DDX39A-207ENST00000588542 CWC22Q9HCG8 908 aaKnown RBP23.62■■□□□ 1.37
DDX39A-207ENST00000588542 MAD2L2Q9UI95 211 aa23.62■■□□□ 1.37
DDX39A-207ENST00000588542 CTDP1Q9Y5B0 961 aaPredicted RBP23.62■■□□□ 1.37
DDX39A-207ENST00000588542 ADCY3O60266 1144 aa23.61■■□□□ 1.37
DDX39A-207ENST00000588542 PARP1P09874 1014 aaKnown RBP23.61■■□□□ 1.37
DDX39A-207ENST00000588542 CPA1P15085 419 aa23.61■■□□□ 1.37
DDX39A-207ENST00000588542 SH3TC2Q8TF17 1288 aa23.61■■□□□ 1.37
DDX39A-207ENST00000588542 ARMC5Q96C12 935 aa23.61■■□□□ 1.37
DDX39A-207ENST00000588542 TCEANC2Q96MN5 208 aa23.61■■□□□ 1.37
DDX39A-207ENST00000588542 JAKMIP1Q96N16 626 aaKnown RBP23.61■■□□□ 1.37
DDX39A-207ENST00000588542 BAZ2BQ9UIF8 2168 aaKnown RBP23.61■■□□□ 1.37
DDX39A-207ENST00000588542 PALM3A6NDB9 673 aaPredicted RBP23.6■■□□□ 1.37
DDX39A-207ENST00000588542 STRNO43815 780 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 GRK4P32298 578 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 COPB2P35606 906 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 MAP2K5Q13163 448 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 GRM4Q14833 912 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 C8orf34Q49A92 452 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 SLC9C1Q4G0N8 1177 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 CCDC174Q6PII3 467 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 ZNF654Q8IZM8 581 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 TMTC2Q8N394 836 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 AGBL1Q96MI9 1066 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 IVNS1ABPQ9Y6Y0 642 aa23.6■■□□□ 1.37
DDX39A-207ENST00000588542 HMGB1P09429 215 aaKnown RBP23.59■■□□□ 1.37
DDX39A-207ENST00000588542 ELNP15502 786 aa23.59■■□□□ 1.37
DDX39A-207ENST00000588542 CYP2B6P20813 491 aa23.59■■□□□ 1.37
DDX39A-207ENST00000588542 CATIPQ7Z7H3 387 aa23.59■■□□□ 1.37
DDX39A-207ENST00000588542 SLAIN1Q8ND83 568 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms