RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 NEK4P51957 841 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 GRM4Q14833 912 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 RABEP1Q15276 862 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 SYDE2Q5VT97 1194 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 APOA5Q6Q788 366 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 KCTD1Q719H9 257 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 CCAR1Q8IX12 1150 aaKnown RBP10.56□□□□□ -0.72
CIRBP-218ENST00000588344 ANKRD13CQ8N6S4 541 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 NUP133Q8WUM0 1156 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 BRF1Q92994 677 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 ERO1AQ96HE7 468 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 UPF3BQ9BZI7 483 aaKnown RBP10.56□□□□□ -0.72
CIRBP-218ENST00000588344 SLC38A10Q9HBR0 1119 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 RBPJLQ9UBG7 517 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 OTOFQ9HC10 1997 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 PCNTO95613 3336 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 KLF18A0A0U1RQI7 1052 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 ST18O60284 1047 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 CPA1P15085 419 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 HOXD10P28358 340 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 MAPK4P31152 587 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 MCM2P49736 904 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 ERVK-24P63145 666 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 TKFCQ3LXA3 575 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 SHCBP1Q8NEM2 672 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 ATG4CQ96DT6 458 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 TCEANC2Q96MN5 208 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 MAF1Q9H063 256 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 MROH8Q9H579 483 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 GPCPD1Q9NPB8 672 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 GPHNQ9NQX3 736 aaPredicted RBP10.55□□□□□ -0.72
CIRBP-218ENST00000588344 FBXO28Q9NVF7 368 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 CPA4Q9UI42 421 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 MAD2L2Q9UI95 211 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 PRR12Q9ULL5 1215 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 LAMA4Q16363 1823 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 FRMPD2Q68DX3 1309 aaPredicted RBP10.55□□□□□ -0.72
CIRBP-218ENST00000588344 ADGRA2Q96PE1 1338 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 THSD7BQ9C0I4 1608 aa10.55□□□□□ -0.72
CIRBP-218ENST00000588344 STRNO43815 780 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 PDIA3P30101 505 aaKnown RBP10.54□□□□□ -0.72
CIRBP-218ENST00000588344 STAT3P40763 770 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
CIRBP-218ENST00000588344 LACTBP83111 547 aaPredicted RBP10.54□□□□□ -0.72
CIRBP-218ENST00000588344 APOBRQ0VD83 1088 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 RTN1Q16799 776 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 CPLX2Q6PUV4 134 aaKnown RBP10.54□□□□□ -0.72
CIRBP-218ENST00000588344 ADGRF4Q8IZF3 695 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 KIF2CQ99661 725 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 PAGR1Q9BTK6 254 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 SPZ1Q9BXG8 430 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 TEX13BQ9BXU2 312 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 SPATC1LQ9H0A9 340 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 RANBP17Q9H2T7 1088 aaKnown RBP10.54□□□□□ -0.72
CIRBP-218ENST00000588344 RIOX1Q9H6W3 641 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 PRDM10Q9NQV6 1147 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 RBM27Q9P2N5 1060 aaKnown RBP10.54□□□□□ -0.72
CIRBP-218ENST00000588344 FBXO40Q9UH90 709 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 BRPF3Q9ULD4 1205 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 NAP1L2Q9ULW6 460 aaPredicted RBP10.54□□□□□ -0.72
CIRBP-218ENST00000588344 LIMCH1Q9UPQ0 1083 aa10.54□□□□□ -0.72
CIRBP-218ENST00000588344 GREB1LQ9C091 1923 aaPredicted RBP10.54□□□□□ -0.72
CIRBP-218ENST00000588344 GOLGA8AA7E2F4 631 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 GOLGA8BA8MQT2 603 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 FOXN1O15353 648 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 ICAM1P05362 532 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 GOLGA8HP0CJ92 632 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 HSPA8P11142 646 aaKnown RBP10.53□□□□□ -0.72
CIRBP-218ENST00000588344 SLC16A2P36021 539 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 PRMT2P55345 433 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 FCGRTP55899 365 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 COL9A3Q14050 684 aaPredicted RBP10.53□□□□□ -0.72
CIRBP-218ENST00000588344 TOB2Q14106 344 aaPredicted RBP10.53□□□□□ -0.72
CIRBP-218ENST00000588344 TMEM132BQ14DG7 1078 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 TTBK2Q6IQ55 1244 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
CIRBP-218ENST00000588344 MICU3Q86XE3 530 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 RIOX2Q8IUF8 465 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 CHST13Q8NET6 341 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 ZNF296Q8WUU4 475 aaPredicted RBP10.53□□□□□ -0.72
CIRBP-218ENST00000588344 ZSCAN31Q96LW9 406 aaPredicted RBP10.53□□□□□ -0.72
CIRBP-218ENST00000588344 UBA5Q9GZZ9 404 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 R3HDMLQ9H3Y0 253 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 CWC22Q9HCG8 908 aaKnown RBP10.53□□□□□ -0.72
CIRBP-218ENST00000588344 BTBD7Q9P203 1132 aa10.53□□□□□ -0.72
CIRBP-218ENST00000588344 ZNF214Q9UL59 606 aaPredicted RBP10.53□□□□□ -0.72
CIRBP-218ENST00000588344 PHIPQ8WWQ0 1821 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 PNMA6FA0A0J9YX94 578 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 ZBTB5O15062 677 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 CNMDO75829 334 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 CDKL5O76039 1030 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 FMNL1O95466 1100 aaPredicted RBP10.52□□□□□ -0.73
CIRBP-218ENST00000588344 PSMC4P43686 418 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 LBX1P52954 281 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 AK2P54819 239 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 PLS1Q14651 629 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 PKN2Q16513 984 aaKnown RBP10.52□□□□□ -0.73
CIRBP-218ENST00000588344 Q3C1V9 767 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms