RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PDCP20941 246 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 NUCB2P80303 420 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 CCL15Q16663 113 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 GPATCH4Q5T3I0 446 aaKnown RBP17.31■□□□□ 0.36
NFIX-208ENST00000587260 PROCA1Q8NCQ7 364 aaPredicted RBP17.31■□□□□ 0.36
NFIX-208ENST00000587260 HHIPL1Q96JK4 782 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 FBXO28Q9NVF7 368 aa17.31■□□□□ 0.36
NFIX-208ENST00000587260 COL11A1P12107 1806 aaPredicted RBP17.3■□□□□ 0.36
NFIX-208ENST00000587260 FAM155AB1AL88 458 aaPredicted RBP17.3■□□□□ 0.36
NFIX-208ENST00000587260 FMNL1O95466 1100 aaPredicted RBP17.3■□□□□ 0.36
NFIX-208ENST00000587260 CETPP11597 493 aa17.3■□□□□ 0.36
NFIX-208ENST00000587260 STAT2P52630 851 aa17.3■□□□□ 0.36
NFIX-208ENST00000587260 MOGSQ13724 837 aa17.3■□□□□ 0.36
NFIX-208ENST00000587260 SRBD1Q8N5C6 995 aaKnown RBP17.3■□□□□ 0.36
NFIX-208ENST00000587260 PIBF1Q8WXW3 757 aa17.3■□□□□ 0.36
NFIX-208ENST00000587260 PHKBQ93100 1093 aa17.3■□□□□ 0.36
NFIX-208ENST00000587260 MS4A4AQ96JQ5 239 aa17.3■□□□□ 0.36
NFIX-208ENST00000587260 RNF26Q9BY78 433 aaPredicted RBP17.3■□□□□ 0.36
NFIX-208ENST00000587260 CNTNAP5Q8WYK1 1306 aa17.3■□□□□ 0.36
NFIX-208ENST00000587260 BAZ2BQ9UIF8 2168 aaKnown RBP17.3■□□□□ 0.36
NFIX-208ENST00000587260 A0A0G2JMZ2 1700 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 PRPF3O43395 683 aaKnown RBP17.29■□□□□ 0.36
NFIX-208ENST00000587260 FLOT1O75955 427 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 SYT1P21579 422 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 SSRP1Q08945 709 aaKnown RBP17.29■□□□□ 0.36
NFIX-208ENST00000587260 SLC35G1Q2M3R5 365 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 DEFB115Q30KQ5 88 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 FASTKD5Q7L8L6 764 aaKnown RBP17.29■□□□□ 0.36
NFIX-208ENST00000587260 BRI3BPQ8WY22 251 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 KIFC2Q96AC6 838 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 DDX11Q96FC9 970 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 ORC3Q9UBD5 711 aaPredicted RBP17.29■□□□□ 0.36
NFIX-208ENST00000587260 AGTPBP1Q9UPW5 1226 aa17.29■□□□□ 0.36
NFIX-208ENST00000587260 hCG_1642624A0A1W2PR95 340 aa17.28■□□□□ 0.36
NFIX-208ENST00000587260 HSPA6P17066 643 aa17.28■□□□□ 0.36
NFIX-208ENST00000587260 TRIM22Q8IYM9 498 aa17.28■□□□□ 0.36
NFIX-208ENST00000587260 FAM184AQ8NB25 1140 aa17.28■□□□□ 0.36
NFIX-208ENST00000587260 SLC26A6Q9BXS9 759 aa17.28■□□□□ 0.36
NFIX-208ENST00000587260 VAT1LQ9HCJ6 419 aa17.28■□□□□ 0.36
NFIX-208ENST00000587260 CYTH3O43739 400 aa17.27■□□□□ 0.36
NFIX-208ENST00000587260 SNAP25P60880 206 aa17.27■□□□□ 0.36
NFIX-208ENST00000587260 SYDE2Q5VT97 1194 aa17.27■□□□□ 0.36
NFIX-208ENST00000587260 LARP1BQ659C4 914 aaKnown RBP17.27■□□□□ 0.36
NFIX-208ENST00000587260 HOMER1Q86YM7 354 aa17.27■□□□□ 0.36
NFIX-208ENST00000587260 CAPNS2Q96L46 248 aa17.27■□□□□ 0.36
NFIX-208ENST00000587260 SLF1Q9BQI6 1058 aa17.27■□□□□ 0.36
NFIX-208ENST00000587260 SPZ1Q9BXG8 430 aa17.27■□□□□ 0.36
NFIX-208ENST00000587260 RBM27Q9P2N5 1060 aaKnown RBP17.27■□□□□ 0.36
NFIX-208ENST00000587260 FEM1BQ9UK73 627 aa17.27■□□□□ 0.36
NFIX-208ENST00000587260 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 BTBD19C9JJ37 291 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 STX6O43752 255 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 DEXIO95424 95 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 BRD1O95696 1058 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 USP17L24Q0WX57 530 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 GPAT2Q6NUI2 795 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 CATSPERGQ6ZRH7 1159 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 FAM160B2Q86V87 743 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 ADGRF4Q8IZF3 695 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 WASF1Q92558 559 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 ZIC5Q96T25 663 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 PRR12Q9ULL5 1215 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 ZDHHC9Q9Y397 364 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 MANSC4A6NHS7 340 aaPredicted RBP17.26■□□□□ 0.35
NFIX-208ENST00000587260 AOC2O75106 756 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 IRX3P78415 501 aaPredicted RBP17.26■□□□□ 0.35
NFIX-208ENST00000587260 PKP1Q13835 747 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 FAM43AQ8N2R8 423 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 CHURC1Q8WUH1 139 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 RIOX1Q9H6W3 641 aa17.26■□□□□ 0.35
NFIX-208ENST00000587260 THSD7BQ9C0I4 1608 aa17.25■□□□□ 0.35
NFIX-208ENST00000587260 WDR33Q9C0J8 1336 aaKnown RBP17.25■□□□□ 0.35
NFIX-208ENST00000587260 CDC37Q16543 378 aaPredicted RBP17.25■□□□□ 0.35
NFIX-208ENST00000587260 BTNL9Q6UXG8 535 aa17.25■□□□□ 0.35
NFIX-208ENST00000587260 ATG4CQ96DT6 458 aa17.25■□□□□ 0.35
NFIX-208ENST00000587260 PIGSQ96S52 555 aa17.25■□□□□ 0.35
NFIX-208ENST00000587260 PTPN18Q99952 460 aa17.25■□□□□ 0.35
NFIX-208ENST00000587260 JMJD4Q9H9V9 463 aa17.25■□□□□ 0.35
NFIX-208ENST00000587260 PPP1R9AQ9ULJ8 1098 aa17.25■□□□□ 0.35
NFIX-208ENST00000587260 MTMR6Q9Y217 621 aa17.25■□□□□ 0.35
NFIX-208ENST00000587260 PDHXO00330 501 aa17.24■□□□□ 0.35
NFIX-208ENST00000587260 IGF2BP3O00425 579 aaKnown RBP eCLIP17.24■□□□□ 0.35
NFIX-208ENST00000587260 FOSBP53539 338 aa17.24■□□□□ 0.35
NFIX-208ENST00000587260 AKAP17AQ02040 695 aaKnown RBP17.24■□□□□ 0.35
NFIX-208ENST00000587260 KIF23Q02241 960 aaPredicted RBP17.24■□□□□ 0.35
NFIX-208ENST00000587260 PABPC4Q13310 644 aaKnown RBP eCLIP17.24■□□□□ 0.35
NFIX-208ENST00000587260 PKN1Q16512 942 aa17.24■□□□□ 0.35
NFIX-208ENST00000587260 RRP36Q96EU6 259 aaKnown RBP17.24■□□□□ 0.35
NFIX-208ENST00000587260 ASCC2Q9H1I8 757 aaPredicted RBP17.24■□□□□ 0.35
NFIX-208ENST00000587260 V9GY48 417 aaPredicted RBP17.24■□□□□ 0.35
NFIX-208ENST00000587260 SPDYE16A6NNV3 312 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms