RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 NBPF11Q86T75 865 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 RASAL3Q86YV0 1011 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 SRBD1Q8N5C6 995 aaKnown RBP13.67□□□□□ -0.22
DNMT1-211ENST00000586988 ZNF713Q8N859 430 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-211ENST00000586988 RRP36Q96EU6 259 aaKnown RBP13.67□□□□□ -0.22
DNMT1-211ENST00000586988 RPAP3Q9H6T3 665 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-211ENST00000586988 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-211ENST00000586988 MYPNQ86TC9 1320 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 USP17L15C9J2P7 530 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 USP17L13C9JLJ4 530 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 USP17L11C9JVI0 530 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 USP17L18D6R9N7 530 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 USP17L22D6RA61 530 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 USP17L17D6RBQ6 530 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 USP17L19D6RCP7 530 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 USP17L20D6RJB6 530 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 PRPF3O43395 683 aaKnown RBP13.66□□□□□ -0.22
DNMT1-211ENST00000586988 JAK2O60674 1132 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 SLC10A3P09131 477 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 XBP1P17861 261 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 GJA5P36382 358 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 SLC4A3P48751 1232 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 USP17L24Q0WX57 530 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 FUT2Q10981 343 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 GADL1Q6ZQY3 521 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 PHKBQ93100 1093 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 CCDC102AQ96A19 550 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 SLF1Q9BQI6 1058 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 RIOX1Q9H6W3 641 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 AGTPBP1Q9UPW5 1226 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 PARP14Q460N5 1801 aa13.66□□□□□ -0.22
DNMT1-211ENST00000586988 FLOT1O75955 427 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 FDX1P10109 184 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 APLP1P51693 650 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 TRAF1Q13077 416 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 ADGRF4Q8IZF3 695 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 CMTR1Q8N1G2 835 aaKnown RBP13.65□□□□□ -0.22
DNMT1-211ENST00000586988 CCDC82Q8N4S0 544 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 RGS22Q8NE09 1264 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 DDX11Q96FC9 970 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 UBA5Q9GZZ9 404 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 PNMA3Q9UL41 463 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 PNMA2Q9UL42 364 aa13.65□□□□□ -0.22
DNMT1-211ENST00000586988 MANSC4A6NHS7 340 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-211ENST00000586988 ZBTB5O15062 677 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 CYTH3O43739 400 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 SCG2P13521 617 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 HOXA7P31268 230 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-211ENST00000586988 SLC16A2P36021 539 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 IRX3P78415 501 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-211ENST00000586988 DGKZQ13574 1117 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 TRIM29Q14134 588 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-211ENST00000586988 PFKFB3Q16875 520 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-211ENST00000586988 TTBK2Q6IQ55 1244 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 HOMER1Q86YM7 354 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 FAM177A1Q8N128 213 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-211ENST00000586988 PRPF38AQ8NAV1 312 aaKnown RBP13.64□□□□□ -0.23
DNMT1-211ENST00000586988 KIFC2Q96AC6 838 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 PRR12Q9ULL5 1215 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 SLC45A1Q9Y2W3 748 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 V9GY48 417 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-211ENST00000586988 A0A0G2JMZ2 1700 aa13.64□□□□□ -0.23
DNMT1-211ENST00000586988 CCL15-CCL14A0A0B4J2E2 113 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 PNMA6FA0A0J9YX94 578 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 OSBPP22059 807 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 MKRN3Q13064 507 aaKnown RBP13.63□□□□□ -0.23
DNMT1-211ENST00000586988 COG2Q14746 738 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 CCL15Q16663 113 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 CATSPERGQ6ZRH7 1159 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-211ENST00000586988 CCDC148Q8NFR7 591 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 GTF3C2Q8WUA4 911 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-211ENST00000586988 CCDC12Q8WUD4 166 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-211ENST00000586988 MTMR8Q96EF0 704 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 ALG1Q9BT22 464 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 RANBP17Q9H2T7 1088 aaKnown RBP13.63□□□□□ -0.23
DNMT1-211ENST00000586988 CPVLQ9H3G5 476 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 JMJD4Q9H9V9 463 aa13.63□□□□□ -0.23
DNMT1-211ENST00000586988 CIZ1Q9ULV3 898 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-211ENST00000586988 CTDP1Q9Y5B0 961 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-211ENST00000586988 RASSF10A6NK89 507 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 H3BQV1 296 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 FDPSP14324 419 aaKnown RBP13.62□□□□□ -0.23
DNMT1-211ENST00000586988 SREBF2Q12772 1141 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 SLC35G1Q2M3R5 365 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 TREML2Q5T2D2 321 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 IFFO2Q5TF58 517 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 ANKRD23Q86SG2 305 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 MB21D1Q8N884 522 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 MS4A4AQ96JQ5 239 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 PIGSQ96S52 555 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 VAT1LQ9HCJ6 419 aa13.62□□□□□ -0.23
DNMT1-211ENST00000586988 ZCCHC17Q9NP64 241 aaKnown RBP13.62□□□□□ -0.23
DNMT1-211ENST00000586988 SH3GLB2Q9NR46 395 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms