RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 DUSP13Q9UII6 198 aa6.97□□□□□ -1.29
ZNF540-204ENST00000586792 OTOL1A6NHN0 477 aaPredicted RBP6.96□□□□□ -1.3
ZNF540-204ENST00000586792 SERPINB4P48594 390 aa6.96□□□□□ -1.3
ZNF540-204ENST00000586792 CHRNEQ04844 493 aa6.96□□□□□ -1.3
ZNF540-204ENST00000586792 EGR3Q06889 387 aa6.96□□□□□ -1.3
ZNF540-204ENST00000586792 ZXDCQ2QGD7 858 aaPredicted RBP6.96□□□□□ -1.3
ZNF540-204ENST00000586792 PLPPR2Q96GM1 343 aa6.96□□□□□ -1.3
ZNF540-204ENST00000586792 SIGLEC10Q96LC7 697 aa6.96□□□□□ -1.3
ZNF540-204ENST00000586792 SGPP1Q9BX95 441 aa6.96□□□□□ -1.3
ZNF540-204ENST00000586792 RBCK1Q9BYM8 510 aa6.96□□□□□ -1.3
ZNF540-204ENST00000586792 ANKRD30AQ9BXX3 1397 aa6.95□□□□□ -1.3
ZNF540-204ENST00000586792 KIF15Q9NS87 1388 aa6.95□□□□□ -1.3
ZNF540-204ENST00000586792 NPATQ14207 1427 aa6.95□□□□□ -1.3
ZNF540-204ENST00000586792 ERBINQ96RT1 1412 aa6.95□□□□□ -1.3
ZNF540-204ENST00000586792 RNF17Q9BXT8 1623 aaKnown RBP6.95□□□□□ -1.3
ZNF540-204ENST00000586792 CEBPAP49715 358 aaPredicted RBP6.95□□□□□ -1.3
ZNF540-204ENST00000586792 GAB4Q2WGN9 574 aa6.95□□□□□ -1.3
ZNF540-204ENST00000586792 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.95□□□□□ -1.3
ZNF540-204ENST00000586792 XAGE3Q8WTP9 111 aa6.95□□□□□ -1.3
ZNF540-204ENST00000586792 DUSP15Q9H1R2 295 aaPredicted RBP6.95□□□□□ -1.3
ZNF540-204ENST00000586792 CCDC9Q9Y3X0 531 aaKnown RBP6.95□□□□□ -1.3
ZNF540-204ENST00000586792 IRAK3Q9Y616 596 aa6.95□□□□□ -1.3
ZNF540-204ENST00000586792 WASHC2CQ9Y4E1 1318 aa6.95□□□□□ -1.3
ZNF540-204ENST00000586792 MYO3AQ8NEV4 1616 aa6.94□□□□□ -1.3
ZNF540-204ENST00000586792 ABCC5O15440 1437 aa6.94□□□□□ -1.3
ZNF540-204ENST00000586792 SSPNQ14714 243 aa6.94□□□□□ -1.3
ZNF540-204ENST00000586792 SPATS1Q496A3 300 aa6.94□□□□□ -1.3
ZNF540-204ENST00000586792 ANKRD24Q8TF21 1146 aa6.94□□□□□ -1.3
ZNF540-204ENST00000586792 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
ZNF540-204ENST00000586792 ZMYM3Q14202 1370 aa6.94□□□□□ -1.3
ZNF540-204ENST00000586792 KANK1Q14678 1352 aa6.94□□□□□ -1.3
ZNF540-204ENST00000586792 AFF3P51826 1226 aaKnown RBP6.93□□□□□ -1.3
ZNF540-204ENST00000586792 TIGD5Q53EQ6 642 aa6.93□□□□□ -1.3
ZNF540-204ENST00000586792 SP8Q8IXZ3 490 aa6.93□□□□□ -1.3
ZNF540-204ENST00000586792 GPR62Q9BZJ7 368 aa6.93□□□□□ -1.3
ZNF540-204ENST00000586792 RRP7BPQ9NSQ0 103 aa6.93□□□□□ -1.3
ZNF540-204ENST00000586792 GPR160Q9UJ42 338 aa6.93□□□□□ -1.3
ZNF540-204ENST00000586792 PRDM15P57071 1507 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-204ENST00000586792 CEP170BQ9Y4F5 1589 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-204ENST00000586792 CAMSAP1Q5T5Y3 1602 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 OR14I1A6ND48 311 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 WASH4PA8MWX3 477 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 PI3P19957 117 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 HSPA2P54652 639 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 DUSP4Q13115 394 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 PCNX4Q63HM2 1172 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 TSPYL5Q86VY4 417 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-204ENST00000586792 ANKS4BQ8N8V4 417 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 PPP1R13LQ8WUF5 828 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 DACT3Q96B18 629 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-204ENST00000586792 KCNH3Q9ULD8 1083 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 TACC3Q9Y6A5 838 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 ZNF142P52746 1687 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-204ENST00000586792 CEP152O94986 1710 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 PZPP20742 1482 aa6.92□□□□□ -1.3
ZNF540-204ENST00000586792 CARNS1A5YM72 827 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 HRKO00198 91 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 LTKP29376 864 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 GRK4P32298 578 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 ITGAEP38570 1179 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 WIPI1Q5MNZ9 446 aaPredicted RBP6.91□□□□□ -1.3
ZNF540-204ENST00000586792 RASIP1Q5U651 963 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 Q96M66 194 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 TEPSINQ96N21 525 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 SIRT5Q9NXA8 310 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 SETD1BQ9UPS6 1966 aaKnown RBP6.91□□□□□ -1.3
ZNF540-204ENST00000586792 ADGRL2O95490 1459 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 ABCC3O15438 1527 aa6.91□□□□□ -1.3
ZNF540-204ENST00000586792 DEPDC5O75140 1603 aa6.9□□□□□ -1.3
ZNF540-204ENST00000586792 PSPNO60542 156 aa6.9□□□□□ -1.3
ZNF540-204ENST00000586792 FBXO24O75426 580 aa6.9□□□□□ -1.3
ZNF540-204ENST00000586792 MRPL41Q8IXM3 137 aaKnown RBP6.9□□□□□ -1.3
ZNF540-204ENST00000586792 TNRQ92752 1358 aa6.9□□□□□ -1.31
ZNF540-204ENST00000586792 PTPRKQ15262 1439 aa6.9□□□□□ -1.31
ZNF540-204ENST00000586792 NCOA1Q15788 1441 aa6.9□□□□□ -1.31
ZNF540-204ENST00000586792 ZBTB7CA1YPR0 619 aa6.89□□□□□ -1.31
ZNF540-204ENST00000586792 ZC3H12DA2A288 527 aaKnown RBP6.89□□□□□ -1.31
ZNF540-204ENST00000586792 SLC22A31A6NKX4 558 aa6.89□□□□□ -1.31
ZNF540-204ENST00000586792 SRSF3P84103 164 aaKnown RBP6.89□□□□□ -1.31
ZNF540-204ENST00000586792 PTPN11Q06124 597 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-204ENST00000586792 SLC6A19Q695T7 634 aa6.89□□□□□ -1.31
ZNF540-204ENST00000586792 ZDHHC14Q8IZN3 488 aa6.89□□□□□ -1.31
ZNF540-204ENST00000586792 FEZF2Q8TBJ5 459 aa6.89□□□□□ -1.31
ZNF540-204ENST00000586792 PANK1Q8TE04 598 aa6.89□□□□□ -1.31
ZNF540-204ENST00000586792 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-204ENST00000586792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.89□□□□□ -1.31
ZNF540-204ENST00000586792 ANKRD50Q9ULJ7 1429 aa6.89□□□□□ -1.31
ZNF540-204ENST00000586792 MROH1Q8NDA8 1641 aa6.89□□□□□ -1.31
ZNF540-204ENST00000586792 A2ML1A8K2U0 1454 aa6.88□□□□□ -1.31
ZNF540-204ENST00000586792 NLRP1Q9C000 1473 aa6.88□□□□□ -1.31
ZNF540-204ENST00000586792 GIPC1O14908 333 aa6.88□□□□□ -1.31
ZNF540-204ENST00000586792 EFEMP1Q12805 493 aa6.88□□□□□ -1.31
ZNF540-204ENST00000586792 CEP131Q9UPN4 1083 aa6.88□□□□□ -1.31
ZNF540-204ENST00000586792 USTQ9Y2C2 406 aa6.88□□□□□ -1.31
ZNF540-204ENST00000586792 PCDHA11Q9Y5I1 949 aa6.88□□□□□ -1.31
ZNF540-204ENST00000586792 POLR1AO95602 1720 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-204ENST00000586792 UGGT1Q9NYU2 1555 aa6.87□□□□□ -1.31
ZNF540-204ENST00000586792 ROCK1Q13464 1354 aa6.87□□□□□ -1.31
ZNF540-204ENST00000586792 PNMA6FA0A0J9YX94 578 aa6.87□□□□□ -1.31
ZNF540-204ENST00000586792 N4BP3O15049 544 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms