RNA–Protein interactions for RNA: ENST00000586751.5

LAMA3-206, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 3,494 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-206ENST00000586751 HDAC6Q9UBN7 1215 aa10.14□□□□□ -0.79
LAMA3-206ENST00000586751 CCDC196A0A1B0GTZ2 297 aa10.14□□□□□ -0.79
LAMA3-206ENST00000586751 MAP2K7O14733 419 aa10.14□□□□□ -0.79
LAMA3-206ENST00000586751 KLRC4O43908 158 aa10.14□□□□□ -0.79
LAMA3-206ENST00000586751 HNRNPH2P55795 449 aaKnown RBP10.14□□□□□ -0.79
LAMA3-206ENST00000586751 AMPD2Q01433 879 aa10.14□□□□□ -0.79
LAMA3-206ENST00000586751 SLC20A2Q08357 652 aa10.14□□□□□ -0.79
LAMA3-206ENST00000586751 ZNF569Q5MCW4 686 aa10.14□□□□□ -0.79
LAMA3-206ENST00000586751 BEND6Q5SZJ8 279 aaPredicted RBP10.14□□□□□ -0.79
LAMA3-206ENST00000586751 GPR161Q8N6U8 529 aaKnown RBP10.14□□□□□ -0.79
LAMA3-206ENST00000586751 GSDMAQ96QA5 445 aa10.14□□□□□ -0.79
LAMA3-206ENST00000586751 BRIP1Q9BX63 1249 aa10.14□□□□□ -0.79
LAMA3-206ENST00000586751 RNF41Q9H4P4 317 aaPredicted RBP10.14□□□□□ -0.79
LAMA3-206ENST00000586751 LIMA1Q9UHB6 759 aaKnown RBP10.14□□□□□ -0.79
LAMA3-206ENST00000586751 CCP110O43303 1012 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 CCDC175P0C221 793 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 CAPN2P17655 700 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 LONRF2Q1L5Z9 754 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 NCAPH2Q6IBW4 605 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 CEP120Q8N960 986 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 SRRTQ9BXP5 876 aaKnown RBP10.13□□□□□ -0.79
LAMA3-206ENST00000586751 TTC36A6NLP5 189 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 TXLNAP40222 546 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 SATB1Q01826 763 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 SMC1AQ14683 1233 aaKnown RBP10.13□□□□□ -0.79
LAMA3-206ENST00000586751 TCP11X2Q5H9J9 407 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 TBC1D9BQ66K14 1250 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 BICDL1Q6ZP65 573 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 FBXO33Q7Z6M2 555 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 SLC44A5Q8NCS7 719 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 SLF1Q9BQI6 1058 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 MKRN1Q9UHC7 482 aaKnown RBP10.13□□□□□ -0.79
LAMA3-206ENST00000586751 CEP83Q9Y592 693 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 NRAPQ86VF7 1730 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 MYH1P12882 1939 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 GTF2A1P52655 376 aaPredicted RBP10.13□□□□□ -0.79
LAMA3-206ENST00000586751 COPB1P53618 953 aaKnown RBP10.13□□□□□ -0.79
LAMA3-206ENST00000586751 VSNL1P62760 191 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 PFKFB3Q16875 520 aaPredicted RBP10.13□□□□□ -0.79
LAMA3-206ENST00000586751 RRAGBQ5VZM2 374 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 CC2D2BQ6DHV5 1058 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 CATIPQ7Z7H3 387 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 NELFBQ8WX92 580 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 RABGGTAQ92696 567 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 CEP131Q9UPN4 1083 aa10.13□□□□□ -0.79
LAMA3-206ENST00000586751 TNRC6CQ9HCJ0 1690 aaKnown RBP10.12□□□□□ -0.79
LAMA3-206ENST00000586751 USP17L3A6NCW0 530 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 USP17L4A6NCW7 530 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 SCG2P13521 617 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 SSR1P43307 286 aaKnown RBP10.12□□□□□ -0.79
LAMA3-206ENST00000586751 HERVK_113P62684 666 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 USP17L1Q7RTZ2 530 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 SRGAP1Q7Z6B7 1085 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 HPS3Q969F9 1004 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 FERMT2Q96AC1 680 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 TTC26A0AVF1 554 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 ENC1O14682 589 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 SRGAP2O75044 1071 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 CHMP4BP1P59074 171 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 KANK3Q6NY19 840 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 ZNF507Q8TCN5 953 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 ABCB6Q9NP58 842 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 BSDC1Q9NW68 430 aaPredicted RBP10.12□□□□□ -0.79
LAMA3-206ENST00000586751 HOOK1Q9UJC3 728 aaKnown RBP10.12□□□□□ -0.79
LAMA3-206ENST00000586751 DUSP10Q9Y6W6 482 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 CDK5RAP2Q96SN8 1893 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 KCNJ18B7U540 433 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 NRDCO43847 1150 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 RPN1P04843 607 aaKnown RBP10.12□□□□□ -0.79
LAMA3-206ENST00000586751 POLD1P28340 1107 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 KCNJ12Q14500 433 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 DHX8Q14562 1220 aaKnown RBP10.12□□□□□ -0.79
LAMA3-206ENST00000586751 GPR101Q96P66 508 aaPredicted RBP10.12□□□□□ -0.79
LAMA3-206ENST00000586751 MYCBPQ99417 103 aaPredicted RBP10.12□□□□□ -0.79
LAMA3-206ENST00000586751 SRP68Q9UHB9 627 aaKnown RBP10.12□□□□□ -0.79
LAMA3-206ENST00000586751 DACH1Q9UI36 760 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 ITIH6Q6UXX5 1313 aa10.12□□□□□ -0.79
LAMA3-206ENST00000586751 EDIL3O43854 480 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 RHOXF2BP0C7M4 288 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 CREBRFQ8IUR6 639 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 RHOXF2Q9BQY4 288 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 AGPAT5Q9NUQ2 364 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 MAD2L2Q9UI95 211 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 RWDD2AQ9UIY3 292 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 CDC23Q9UJX2 597 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 RAB21Q9UL25 225 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 SF3B3Q15393 1217 aaKnown RBP10.11□□□□□ -0.79
LAMA3-206ENST00000586751 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 GOLGA1Q92805 767 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 DUSP9Q99956 384 aaKnown RBP10.11□□□□□ -0.79
LAMA3-206ENST00000586751 FLT1P17948 1338 aa10.11□□□□□ -0.79
LAMA3-206ENST00000586751 LRRIQ3A6PVS8 624 aaPredicted RBP10.1□□□□□ -0.79
LAMA3-206ENST00000586751 N4BP3O15049 544 aa10.1□□□□□ -0.79
LAMA3-206ENST00000586751 MAFGO15525 162 aa10.1□□□□□ -0.79
LAMA3-206ENST00000586751 ORC4O43929 436 aa10.1□□□□□ -0.79
LAMA3-206ENST00000586751 DDAH1O94760 285 aa10.1□□□□□ -0.79
LAMA3-206ENST00000586751 TM4SF1P30408 202 aa10.1□□□□□ -0.79
LAMA3-206ENST00000586751 SPATA31A1Q5TZJ5 1347 aa10.1□□□□□ -0.79
LAMA3-206ENST00000586751 ANKRD18AQ8IVF6 992 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms