RNA–Protein interactions for RNA: ENST00000585265.1

PSMD11-211, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-211	ENST00000585265	SMARCC2	Q8TAQ2	1214 aa		13.99	□□□□□ -0.17
PSMD11-211	ENST00000585265	RAET1E	Q8TD07	263 aa		13.99	□□□□□ -0.17
PSMD11-211	ENST00000585265	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.99	□□□□□ -0.17
PSMD11-211	ENST00000585265	EHD4	Q9H223	541 aa		13.99	□□□□□ -0.17
PSMD11-211	ENST00000585265	GINM1	Q9NU53	330 aa		13.99	□□□□□ -0.17
PSMD11-211	ENST00000585265	USP17L10	C9JJH3	530 aa		13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	GH2	P01242	217 aa		13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	ZSCAN22	P10073	491 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	GRK4	P32298	578 aa		13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	CDK8	P49336	464 aa		13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	FOSB	P53539	338 aa		13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	TFAP4	Q01664	338 aa		13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.98	□□□□□ -0.17	3e-15	■■□□□ 13.8
PSMD11-211	ENST00000585265	MTFR1	Q15390	333 aa		13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	IFIT1B	Q5T764	474 aa	Known RBP	13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	ZNF654	Q8IZM8	581 aa		13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	ENAH	Q8N8S7	591 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	TMOD4	Q9NZQ9	345 aa		13.98	□□□□□ -0.17
PSMD11-211	ENST00000585265	DDX11L8	A8MPP1	907 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	C19orf81	C9J6K1	198 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	TNPO2	O14787	897 aa	Known RBP	13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	CDKL5	O76039	1030 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	BAG4	O95429	457 aa	Known RBP	13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	TSPY3	P0CV98	308 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	TSPY8	P0CW00	308 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	RASA1	P20936	1047 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	SHMT1	P34896	483 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	RTN1	Q16799	776 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	FAM110C	Q1W6H9	321 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	CERKL	Q49MI3	558 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	CCDC178	Q5BJE1	867 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	CATIP	Q7Z7H3	387 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	NUP133	Q8WUM0	1156 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	MTMR6	Q9Y217	621 aa		13.97	□□□□□ -0.17
PSMD11-211	ENST00000585265	GOLGA6L22	H0YM25	854 aa		13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265		H3BQV1	296 aa		13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	NMT2	O60551	498 aa		13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	PPFIA3	O75145	1194 aa		13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	F13A1	P00488	732 aa		13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	PDIA4	P13667	645 aa	Known RBP	13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	HOXA7	P31268	230 aa	Predicted RBP	13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	GCLC	P48506	637 aa	Predicted RBP	13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	FLT3LG	P49771	235 aa		13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	GABPA	Q06546	454 aa		13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	ABCB5	Q2M3G0	1257 aa		13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	P2RX7	Q99572	595 aa	Known RBP	13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	EMILIN3	Q9NT22	766 aa		13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	ORC3	Q9UBD5	711 aa	Predicted RBP	13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	PLXNB2	O15031	1838 aa		13.96	□□□□□ -0.17
PSMD11-211	ENST00000585265	NID2	Q14112	1375 aa		13.96	□□□□□ -0.18
PSMD11-211	ENST00000585265	PEX10	O60683	326 aa		13.95	□□□□□ -0.18
PSMD11-211	ENST00000585265	CDC27	P30260	824 aa		13.95	□□□□□ -0.18
PSMD11-211	ENST00000585265	RCAN1	P53805	252 aa		13.95	□□□□□ -0.18
PSMD11-211	ENST00000585265	IRX3	P78415	501 aa	Predicted RBP	13.95	□□□□□ -0.18
PSMD11-211	ENST00000585265	ZYX	Q15942	572 aa	Known RBP	13.95	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP17L2	Q6R6M4	530 aa		13.95	□□□□□ -0.18
PSMD11-211	ENST00000585265	CLEC17A	Q6ZS10	378 aa		13.95	□□□□□ -0.18
PSMD11-211	ENST00000585265	KAT14	Q9H8E8	782 aa		13.95	□□□□□ -0.18
PSMD11-211	ENST00000585265	BIN2	Q9UBW5	565 aa	Predicted RBP	13.95	□□□□□ -0.18
PSMD11-211	ENST00000585265	SWAP70	Q9UH65	585 aa		13.95	□□□□□ -0.18
PSMD11-211	ENST00000585265	CCDC196	A0A1B0GTZ2	297 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	ADCY3	O60266	1144 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	DDAH1	O94760	285 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	CALM1	P0DP23	149 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	CALM2	P0DP24	149 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	CALM3	P0DP25	149 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	ELN	P15502	786 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	GUCY1A2	P33402	732 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	ADD1	P35611	737 aa	Known RBP	13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	HERVK_113	P62684	666 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	PRPF38B	Q5VTL8	546 aa	Known RBP	13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	MCTP1	Q6DN14	999 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	SLAIN1	Q8ND83	568 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	ACER1	Q8TDN7	264 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	COA7	Q96BR5	231 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	CABP5	Q9NP86	173 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	MORF4L1	Q9UBU8	362 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	ATP6V1D	Q9Y5K8	247 aa		13.94	□□□□□ -0.18
PSMD11-211	ENST00000585265	CCL5	P13501	91 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	PTMS	P20962	102 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	UBXN2A	P68543	259 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	SSRP1	Q08945	709 aa	Known RBP	13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	IRF5	Q13568	498 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	SEPT2	Q15019	361 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	DGKH	Q86XP1	1220 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	FANCB	Q8NB91	859 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	NEDD1	Q8NHV4	660 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	C12orf42	Q96LP6	360 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	FEZ1	Q99689	392 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	TXNRD2	Q9NNW7	524 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	TCP11L1	Q9NUJ3	509 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	RBPJL	Q9UBG7	517 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	TAOK2	Q9UL54	1235 aa		13.93	□□□□□ -0.18
PSMD11-211	ENST00000585265	MPHOSPH10	O00566	681 aa	Known RBP	13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	FDPS	P14324	419 aa	Known RBP	13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	AKR1B1	P15121	316 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265		Q3C1V9	767 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms