RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 MINDY4BA8MYZ0 360 aa18.69■□□□□ 0.58
SKA2-209ENST00000583976 GPAA1O43292 621 aa18.69■□□□□ 0.58
SKA2-209ENST00000583976 PRDM1O75626 825 aa18.69■□□□□ 0.58
SKA2-209ENST00000583976 STAT3P40763 770 aa18.69■□□□□ 0.58
SKA2-209ENST00000583976 KCTD2Q14681 263 aa18.69■□□□□ 0.58
SKA2-209ENST00000583976 CCDC136Q96JN2 1154 aa18.69■□□□□ 0.58
SKA2-209ENST00000583976 RIPK3Q9Y572 518 aa18.69■□□□□ 0.58
SKA2-209ENST00000583976 LRRC37A2A6NM11 1700 aa18.69■□□□□ 0.58
SKA2-209ENST00000583976 TRIM43BA6NCK2 446 aa18.68■□□□□ 0.58
SKA2-209ENST00000583976 MX1P20591 662 aa18.68■□□□□ 0.58
SKA2-209ENST00000583976 SHHQ15465 462 aa18.68■□□□□ 0.58
SKA2-209ENST00000583976 SBK1Q52WX2 424 aa18.68■□□□□ 0.58
SKA2-209ENST00000583976 SNRNP48Q6IEG0 339 aaKnown RBP18.68■□□□□ 0.58
SKA2-209ENST00000583976 LRRC47Q8N1G4 583 aaKnown RBP18.68■□□□□ 0.58
SKA2-209ENST00000583976 BADQ92934 168 aa18.68■□□□□ 0.58
SKA2-209ENST00000583976 TRIM43Q96BQ3 446 aaPredicted RBP18.68■□□□□ 0.58
SKA2-209ENST00000583976 SLF1Q9BQI6 1058 aa18.68■□□□□ 0.58
SKA2-209ENST00000583976 TINF2Q9BSI4 451 aa18.68■□□□□ 0.58
SKA2-209ENST00000583976 IGKV6D-41A0A0C4DH26 115 aa18.67■□□□□ 0.58
SKA2-209ENST00000583976 ZNF865P0CJ78 1059 aaPredicted RBP18.67■□□□□ 0.58
SKA2-209ENST00000583976 RARBP10826 455 aa18.67■□□□□ 0.58
SKA2-209ENST00000583976 ITGB8P26012 769 aa18.67■□□□□ 0.58
SKA2-209ENST00000583976 TDO2P48775 406 aa18.67■□□□□ 0.58
SKA2-209ENST00000583976 PHF24Q9UPV7 400 aa18.67■□□□□ 0.58
SKA2-209ENST00000583976 F5H6K3 240 aa18.66■□□□□ 0.58
SKA2-209ENST00000583976 SLC4A3P48751 1232 aa18.66■□□□□ 0.58
SKA2-209ENST00000583976 TLE2Q04725 743 aa18.66■□□□□ 0.58
SKA2-209ENST00000583976 KLRC3Q07444 240 aa18.66■□□□□ 0.58
SKA2-209ENST00000583976 CEP95Q96GE4 821 aa18.66■□□□□ 0.58
SKA2-209ENST00000583976 SEC62Q99442 399 aaKnown RBP18.66■□□□□ 0.58
SKA2-209ENST00000583976 TEX13BQ9BXU2 312 aa18.66■□□□□ 0.58
SKA2-209ENST00000583976 MKNK2Q9HBH9 465 aa18.66■□□□□ 0.58
SKA2-209ENST00000583976 TTC41PQ6P2S7 1318 aa18.66■□□□□ 0.58
SKA2-209ENST00000583976 SALL3Q9BXA9 1300 aa18.66■□□□□ 0.58
SKA2-209ENST00000583976 SYNRGQ9UMZ2 1314 aa18.66■□□□□ 0.58
SKA2-209ENST00000583976 A0A1W2PQ45 241 aaPredicted RBP18.65■□□□□ 0.58
SKA2-209ENST00000583976 A0A1W2PQY0 241 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 MYADML2A6NDP7 307 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 POTEB2H3BUK9 544 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 ERC2O15083 957 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 RNF113AO15541 343 aaKnown RBP18.65■□□□□ 0.58
SKA2-209ENST00000583976 ADAMTS4O75173 837 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 PDE1AP54750 535 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 IRX5P78411 483 aaPredicted RBP18.65■□□□□ 0.58
SKA2-209ENST00000583976 CPXCR1Q8N123 301 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 PI4K2BQ8TCG2 481 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 FGD4Q96M96 766 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 NYAP2Q9P242 653 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 NRBP1Q9UHY1 535 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 PLIN4Q96Q06 1357 aa18.65■□□□□ 0.58
SKA2-209ENST00000583976 ADCY6O43306 1168 aa18.64■□□□□ 0.57
SKA2-209ENST00000583976 PQBP1O60828 265 aaKnown RBP18.64■□□□□ 0.57
SKA2-209ENST00000583976 AKR1A1P14550 325 aa18.64■□□□□ 0.57
SKA2-209ENST00000583976 EPHB4P54760 987 aa18.64■□□□□ 0.57
SKA2-209ENST00000583976 GIMAP6Q6P9H5 292 aa18.64■□□□□ 0.57
SKA2-209ENST00000583976 RASGRP2Q7LDG7 609 aa18.64■□□□□ 0.57
SKA2-209ENST00000583976 KIFC2Q96AC6 838 aa18.64■□□□□ 0.57
SKA2-209ENST00000583976 CHMP4CQ96CF2 233 aa18.64■□□□□ 0.57
SKA2-209ENST00000583976 RAVER2Q9HCJ3 691 aaKnown RBP18.64■□□□□ 0.57
SKA2-209ENST00000583976 CLIP2Q9UDT6 1046 aa18.64■□□□□ 0.57
SKA2-209ENST00000583976 ZHX1Q9UKY1 873 aaPredicted RBP18.64■□□□□ 0.57
SKA2-209ENST00000583976 DIS3Q9Y2L1 958 aaKnown RBP18.64■□□□□ 0.57
SKA2-209ENST00000583976 DNAJC25-GNG10A0A024R161 153 aa18.63■□□□□ 0.57
SKA2-209ENST00000583976 SNAI1O95863 264 aaPredicted RBP18.63■□□□□ 0.57
SKA2-209ENST00000583976 COPB2P35606 906 aa18.63■□□□□ 0.57
SKA2-209ENST00000583976 ZNF697Q5TEC3 545 aa18.63■□□□□ 0.57
SKA2-209ENST00000583976 C1orf53Q5VUE5 145 aa18.63■□□□□ 0.57
SKA2-209ENST00000583976 CENPQQ7L2Z9 268 aaPredicted RBP18.63■□□□□ 0.57
SKA2-209ENST00000583976 RNF180Q86T96 592 aa18.63■□□□□ 0.57
SKA2-209ENST00000583976 CNPY2Q9Y2B0 182 aa18.63■□□□□ 0.57
SKA2-209ENST00000583976 SPTBN5Q9NRC6 3674 aaKnown RBP18.62■□□□□ 0.57
SKA2-209ENST00000583976 APPP05067 770 aa18.62■□□□□ 0.57
SKA2-209ENST00000583976 CLTBP09497 229 aa18.62■□□□□ 0.57
SKA2-209ENST00000583976 PDE4AP27815 886 aa18.62■□□□□ 0.57
SKA2-209ENST00000583976 PLEKHM2Q8IWE5 1019 aa18.62■□□□□ 0.57
SKA2-209ENST00000583976 LCTP09848 1927 aa18.62■□□□□ 0.57
SKA2-209ENST00000583976 SYNGAP1Q96PV0 1343 aa18.61■□□□□ 0.57
SKA2-209ENST00000583976 FOXP2O15409 715 aa18.61■□□□□ 0.57
SKA2-209ENST00000583976 ERICH6BQ5W0A0 696 aa18.61■□□□□ 0.57
SKA2-209ENST00000583976 FAM109BQ6ICB4 259 aaPredicted RBP18.61■□□□□ 0.57
SKA2-209ENST00000583976 SLC38A10Q9HBR0 1119 aa18.61■□□□□ 0.57
SKA2-209ENST00000583976 HOMER2Q9NSB8 354 aa18.61■□□□□ 0.57
SKA2-209ENST00000583976 PPP4R2Q9NY27 417 aa18.61■□□□□ 0.57
SKA2-209ENST00000583976 MTMR4Q9NYA4 1195 aa18.61■□□□□ 0.57
SKA2-209ENST00000583976 ZFYP08048 801 aaPredicted RBP18.6■□□□□ 0.57
SKA2-209ENST00000583976 CCDC129Q6ZRS4 1044 aa18.6■□□□□ 0.57
SKA2-209ENST00000583976 IFNL3Q8IZI9 196 aa18.6■□□□□ 0.57
SKA2-209ENST00000583976 PRPF38AQ8NAV1 312 aaKnown RBP18.6■□□□□ 0.57
SKA2-209ENST00000583976 DDX11Q96FC9 970 aa18.6■□□□□ 0.57
SKA2-209ENST00000583976 FSD1Q9BTV5 496 aa18.6■□□□□ 0.57
SKA2-209ENST00000583976 TTYH1Q9H313 450 aaPredicted RBP18.6■□□□□ 0.57
SKA2-209ENST00000583976 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.6■□□□□ 0.57
SKA2-209ENST00000583976 ISY1Q9ULR0 285 aaKnown RBP18.6■□□□□ 0.57
SKA2-209ENST00000583976 ATP2A1O14983 1001 aa18.59■□□□□ 0.57
SKA2-209ENST00000583976 TTLL1O95922 423 aa18.59■□□□□ 0.57
SKA2-209ENST00000583976 GNAT2P19087 354 aa18.59■□□□□ 0.57
SKA2-209ENST00000583976 ACLYP53396 1101 aa18.59■□□□□ 0.57
SKA2-209ENST00000583976 GMCL1P1Q8NEA9 526 aa18.59■□□□□ 0.57
SKA2-209ENST00000583976 STARD7Q9NQZ5 370 aa18.59■□□□□ 0.57
SKA2-209ENST00000583976 DDX49Q9Y6V7 483 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms