RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 RAD21O60216 631 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 METAP2P50579 478 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBBP4-201ENST00000583708 HTRA3P83110 453 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 IKQ13123 557 aaPredicted RBP10.83□□□□□ -0.68
UBBP4-201ENST00000583708 TOB2Q14106 344 aaPredicted RBP10.83□□□□□ -0.68
UBBP4-201ENST00000583708 RTN1Q16799 776 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 FAM110CQ1W6H9 321 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 KIAA1755Q5JYT7 1200 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 SYDE2Q5VT97 1194 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 C17orf99Q6UX52 265 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 SHCBP1Q8NEM2 672 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 GPRC5AQ8NFJ5 357 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 ZIC5Q96T25 663 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 RIOX1Q9H6W3 641 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 SLC38A10Q9HBR0 1119 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 MAD2L2Q9UI95 211 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 THSD7BQ9C0I4 1608 aa10.83□□□□□ -0.68
UBBP4-201ENST00000583708 SPDYE16A6NNV3 312 aaPredicted RBP10.82□□□□□ -0.68
UBBP4-201ENST00000583708 GOLGA8AA7E2F4 631 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 GOLGA8BA8MQT2 603 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 hCG_1984214I3L0E3 225 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 STRNO43815 780 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 PFKFB2O60825 505 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 BCRP11274 1271 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 AK2P54819 239 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 APOBRQ0VD83 1088 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 KCTD1Q719H9 257 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.82□□□□□ -0.68
UBBP4-201ENST00000583708 ZNF713Q8N859 430 aaPredicted RBP10.82□□□□□ -0.68
UBBP4-201ENST00000583708 NUP133Q8WUM0 1156 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 SNX21Q969T3 373 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 MTMR8Q96EF0 704 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 LLPHQ9BRT6 129 aaKnown RBP10.82□□□□□ -0.68
UBBP4-201ENST00000583708 TEX13BQ9BXU2 312 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 LRRC2Q9BYS8 371 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 SLKQ9H2G2 1235 aaPredicted RBP10.82□□□□□ -0.68
UBBP4-201ENST00000583708 MROH8Q9H579 483 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 MAP3K20Q9NYL2 800 aaKnown RBP10.82□□□□□ -0.68
UBBP4-201ENST00000583708 FBXO40Q9UH90 709 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 BRPF3Q9ULD4 1205 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 PRR12Q9ULL5 1215 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 LOC285556D6RIA3 1793 aa10.82□□□□□ -0.68
UBBP4-201ENST00000583708 PNMA6FA0A0J9YX94 578 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 CPLX1O14810 134 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 TRPA1O75762 1119 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 CPA1P15085 419 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 IFNAR1P17181 557 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 MAPK4P31152 587 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 CRHR2Q13324 411 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 KIF22Q14807 665 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 TMTC3Q6ZXV5 915 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 MICU3Q86XE3 530 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 RIOX2Q8IUF8 465 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 ABRAQ8N0Z2 381 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 RGS22Q8NE09 1264 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 KIFC2Q96AC6 838 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 RRP36Q96EU6 259 aaKnown RBP10.81□□□□□ -0.68
UBBP4-201ENST00000583708 TCEANC2Q96MN5 208 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 GLT8D2Q9H1C3 349 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 RANBP17Q9H2T7 1088 aaKnown RBP10.81□□□□□ -0.68
UBBP4-201ENST00000583708 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 GPHNQ9NQX3 736 aaPredicted RBP10.81□□□□□ -0.68
UBBP4-201ENST00000583708 RBPJLQ9UBG7 517 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 ISY1Q9ULR0 285 aaKnown RBP10.81□□□□□ -0.68
UBBP4-201ENST00000583708 HPS5Q9UPZ3 1129 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 MYH4Q9Y623 1939 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 ADGRA2Q96PE1 1338 aa10.81□□□□□ -0.68
UBBP4-201ENST00000583708 PTPRFP10586 1907 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 ZBTB5O15062 677 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 PRPF3O43395 683 aaKnown RBP10.8□□□□□ -0.68
UBBP4-201ENST00000583708 ICAM1P05362 532 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 PDIA4P13667 645 aaKnown RBP10.8□□□□□ -0.68
UBBP4-201ENST00000583708 HOXD10P28358 340 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 STAT3P40763 770 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 CTCFP49711 727 aaPredicted RBP10.8□□□□□ -0.68
UBBP4-201ENST00000583708 PRMT2P55345 433 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 ERVK-9P63128 1117 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 ERVK-24P63145 666 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
UBBP4-201ENST00000583708 SP3Q02447 781 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 MCTP2Q6DN12 878 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 CCAR1Q8IX12 1150 aaKnown RBP10.8□□□□□ -0.68
UBBP4-201ENST00000583708 TRIM22Q8IYM9 498 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 ADGRF4Q8IZF3 695 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 CHST13Q8NET6 341 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 REPS2Q8NFH8 660 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 WASF1Q92558 559 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 ERO1AQ96HE7 468 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 NUP88Q99567 741 aaPredicted RBP10.8□□□□□ -0.68
UBBP4-201ENST00000583708 RNF26Q9BY78 433 aaPredicted RBP10.8□□□□□ -0.68
UBBP4-201ENST00000583708 SPATC1LQ9H0A9 340 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 JMJD4Q9H9V9 463 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 SEC63Q9UGP8 760 aaKnown RBP10.8□□□□□ -0.68
UBBP4-201ENST00000583708 NAP1L2Q9ULW6 460 aaPredicted RBP10.8□□□□□ -0.68
UBBP4-201ENST00000583708 KIF3AQ9Y496 699 aa10.8□□□□□ -0.68
UBBP4-201ENST00000583708 GPR25O00155 361 aa10.79□□□□□ -0.68
UBBP4-201ENST00000583708 FKTNO75072 461 aa10.79□□□□□ -0.68
UBBP4-201ENST00000583708 CYP2C8P10632 490 aa10.79□□□□□ -0.68
UBBP4-201ENST00000583708 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms