RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 KCTD1Q719H9 257 aa19■□□□□ 0.63
CDK5RAP3-228ENST00000583363 NBPF11Q86T75 865 aa19■□□□□ 0.63
CDK5RAP3-228ENST00000583363 CMTR1Q8N1G2 835 aaKnown RBP19■□□□□ 0.63
CDK5RAP3-228ENST00000583363 NUP88Q99567 741 aaPredicted RBP19■□□□□ 0.63
CDK5RAP3-228ENST00000583363 GPCPD1Q9NPB8 672 aa19■□□□□ 0.63
CDK5RAP3-228ENST00000583363 FOXD4L1Q9NU39 408 aa19■□□□□ 0.63
CDK5RAP3-228ENST00000583363 JAK2O60674 1132 aa18.99■□□□□ 0.63
CDK5RAP3-228ENST00000583363 DTNBO60941 627 aa18.99■□□□□ 0.63
CDK5RAP3-228ENST00000583363 CDKL5O76039 1030 aa18.99■□□□□ 0.63
CDK5RAP3-228ENST00000583363 HMGCS2P54868 508 aa18.99■□□□□ 0.63
CDK5RAP3-228ENST00000583363 CCDC96Q2M329 555 aa18.99■□□□□ 0.63
CDK5RAP3-228ENST00000583363 SLC35G1Q2M3R5 365 aa18.99■□□□□ 0.63
CDK5RAP3-228ENST00000583363 CCDC82Q8N4S0 544 aa18.99■□□□□ 0.63
CDK5RAP3-228ENST00000583363 WNK4Q96J92 1243 aa18.99■□□□□ 0.63
CDK5RAP3-228ENST00000583363 UBA5Q9GZZ9 404 aa18.99■□□□□ 0.63
CDK5RAP3-228ENST00000583363 SMC3Q9UQE7 1217 aa18.99■□□□□ 0.63
CDK5RAP3-228ENST00000583363 A0A0G2JLL6 359 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-228ENST00000583363 WDR46O15213 610 aaKnown RBP18.98■□□□□ 0.63
CDK5RAP3-228ENST00000583363 PLA2G6O60733 806 aa18.98■□□□□ 0.63
CDK5RAP3-228ENST00000583363 SSRP1Q08945 709 aaKnown RBP18.98■□□□□ 0.63
CDK5RAP3-228ENST00000583363 PKN2Q16513 984 aaKnown RBP18.98■□□□□ 0.63
CDK5RAP3-228ENST00000583363 FAM83BQ5T0W9 1011 aa18.98■□□□□ 0.63
CDK5RAP3-228ENST00000583363 BTNL9Q6UXG8 535 aa18.98■□□□□ 0.63
CDK5RAP3-228ENST00000583363 PRRT2Q7Z6L0 340 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-228ENST00000583363 RIOX1Q9H6W3 641 aa18.98■□□□□ 0.63
CDK5RAP3-228ENST00000583363 TMOD4Q9NZQ9 345 aa18.98■□□□□ 0.63
CDK5RAP3-228ENST00000583363 PTPDC1A2A3K4 754 aa18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 TMEM232C9JQI7 657 aa18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 GPR25O00155 361 aa18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 PRPF3O43395 683 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 CYTH3O43739 400 aa18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 FMNL1O95466 1100 aaPredicted RBP18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 FDPSP14324 419 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 HMGN5P82970 282 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 SPRYD7Q5W111 196 aa18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 PHKBQ93100 1093 aa18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 DDX11Q96FC9 970 aa18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 SPZ1Q9BXG8 430 aa18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 CPVLQ9H3G5 476 aa18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 CWC22Q9HCG8 908 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-228ENST00000583363 PPFIA3O75145 1194 aa18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 VCAM1P19320 739 aa18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 GJB2P29033 226 aa18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 SLC16A2P36021 539 aa18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 NOM1Q5C9Z4 860 aaKnown RBP18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 CHURC1Q8WUH1 139 aa18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 SLC26A6Q9BXS9 759 aa18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 RNF26Q9BY78 433 aaPredicted RBP18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 R3HDMLQ9H3Y0 253 aa18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 PCDH10Q9P2E7 1040 aa18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 ORC3Q9UBD5 711 aaPredicted RBP18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 FEM1BQ9UK73 627 aa18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 V9GY48 417 aaPredicted RBP18.96■□□□□ 0.63
CDK5RAP3-228ENST00000583363 ZBTB48P10074 688 aaPredicted RBP18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 SREBF2Q12772 1141 aa18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 SNAPC2Q13487 334 aa18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 MOGSQ13724 837 aa18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 FAM160B2Q86V87 743 aa18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 TRIM22Q8IYM9 498 aa18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 ADGRF4Q8IZF3 695 aa18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PROCA1Q8NCQ7 364 aaPredicted RBP18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 MS4A4AQ96JQ5 239 aa18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 RPAP3Q9H6T3 665 aaPredicted RBP18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 VAT1LQ9HCJ6 419 aa18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 ISY1Q9ULR0 285 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 CNTNAP5Q8WYK1 1306 aa18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 STK36Q9NRP7 1315 aa18.95■□□□□ 0.62
CDK5RAP3-228ENST00000583363 BAZ2BQ9UIF8 2168 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-228ENST00000583363 AKAP17AQ02040 695 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-228ENST00000583363 SYDE2Q5VT97 1194 aa18.94■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PRPF38BQ5VTL8 546 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-228ENST00000583363 CATSPERGQ6ZRH7 1159 aa18.94■□□□□ 0.62
CDK5RAP3-228ENST00000583363 FASTKD5Q7L8L6 764 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-228ENST00000583363 MTMR8Q96EF0 704 aa18.94■□□□□ 0.62
CDK5RAP3-228ENST00000583363 CFHR5Q9BXR6 569 aa18.94■□□□□ 0.62
CDK5RAP3-228ENST00000583363 JMJD4Q9H9V9 463 aa18.94■□□□□ 0.62
CDK5RAP3-228ENST00000583363 USP17L15C9J2P7 530 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 USP17L13C9JLJ4 530 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 USP17L11C9JVI0 530 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 USP17L18D6R9N7 530 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 USP17L22D6RA61 530 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 USP17L17D6RBQ6 530 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 USP17L19D6RCP7 530 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 USP17L20D6RJB6 530 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 DEXIO95424 95 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 HOXA7P31268 230 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 STAT2P52630 851 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 GTF2A2P52657 109 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 USP17L24Q0WX57 530 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PKN1Q16512 942 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 FBXO46Q6PJ61 603 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 GADL1Q6ZQY3 521 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 FAM184AQ8NB25 1140 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 FBXO28Q9NVF7 368 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 RBM27Q9P2N5 1060 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 PRR12Q9ULL5 1215 aa18.93■□□□□ 0.62
CDK5RAP3-228ENST00000583363 hCG_1642624A0A1W2PR95 340 aa18.92■□□□□ 0.62
CDK5RAP3-228ENST00000583363 FKTNO75072 461 aa18.92■□□□□ 0.62
CDK5RAP3-228ENST00000583363 CETPP11597 493 aa18.92■□□□□ 0.62
CDK5RAP3-228ENST00000583363 IKQ13123 557 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms