RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 TAL1P17542 331 aaPredicted RBP16.35■□□□□ 0.21
GGA3-216ENST00000583282 AK2P54819 239 aa16.35■□□□□ 0.21
GGA3-216ENST00000583282 COG2Q14746 738 aa16.35■□□□□ 0.21
GGA3-216ENST00000583282 GPATCH4Q5T3I0 446 aaKnown RBP16.35■□□□□ 0.21
GGA3-216ENST00000583282 SYDE2Q5VT97 1194 aa16.35■□□□□ 0.21
GGA3-216ENST00000583282 TMTC2Q8N394 836 aa16.35■□□□□ 0.21
GGA3-216ENST00000583282 UBA5Q9GZZ9 404 aa16.35■□□□□ 0.21
GGA3-216ENST00000583282 TXNRD2Q9NNW7 524 aa16.35■□□□□ 0.21
GGA3-216ENST00000583282 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
GGA3-216ENST00000583282 CTDP1Q9Y5B0 961 aaPredicted RBP16.35■□□□□ 0.21
GGA3-216ENST00000583282 MYPNQ86TC9 1320 aa16.35■□□□□ 0.21
GGA3-216ENST00000583282 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
GGA3-216ENST00000583282 PLXNB2O15031 1838 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 PLEKHA8P1O95397 391 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 GCLCP48506 637 aaPredicted RBP16.34■□□□□ 0.21
GGA3-216ENST00000583282 METAP2P50579 478 aaKnown RBP eCLIP16.34■□□□□ 0.21
GGA3-216ENST00000583282 STK3Q13188 491 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 PLS1Q14651 629 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 RABEP1Q15276 862 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 RTN1Q16799 776 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 CCDC174Q6PII3 467 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 POTEEQ6S8J3 1075 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 GTF3C2Q8WUA4 911 aaPredicted RBP16.34■□□□□ 0.21
GGA3-216ENST00000583282 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 BTBD7Q9P203 1132 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 PRR12Q9ULL5 1215 aa16.34■□□□□ 0.21
GGA3-216ENST00000583282 CEP350Q5VT06 3117 aa16.33■□□□□ 0.21
GGA3-216ENST00000583282 GPR25O00155 361 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 VWA5AO00534 786 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 CNMDO75829 334 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 CALM1P0DP23 149 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 CALM2P0DP24 149 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 CALM3P0DP25 149 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 HSPA8P11142 646 aaKnown RBP16.33■□□□□ 0.2
GGA3-216ENST00000583282 BCRP11274 1271 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 SLC4A3P48751 1232 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 CPXCR1Q8N123 301 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 CHURC1Q8WUH1 139 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 PIBF1Q8WXW3 757 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 CFHR5Q9BXR6 569 aa16.33■□□□□ 0.2
GGA3-216ENST00000583282 PALM3A6NDB9 673 aaPredicted RBP16.32■□□□□ 0.2
GGA3-216ENST00000583282 KLRF2D3W0D1 207 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 KIF5BP33176 963 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 ERVK-9P63128 1117 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 ERVK-24P63145 666 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
GGA3-216ENST00000583282 FAM110CQ1W6H9 321 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 WDR78Q5VTH9 848 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 C17orf99Q6UX52 265 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 LBX2Q6XYB7 198 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 HOMER1Q86YM7 354 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 CMTR1Q8N1G2 835 aaKnown RBP16.32■□□□□ 0.2
GGA3-216ENST00000583282 PRPF38AQ8NAV1 312 aaKnown RBP16.32■□□□□ 0.2
GGA3-216ENST00000583282 RAVER2Q9HCJ3 691 aaKnown RBP16.32■□□□□ 0.2
GGA3-216ENST00000583282 VAT1LQ9HCJ6 419 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 HOXC10Q9NYD6 342 aa16.32■□□□□ 0.2
GGA3-216ENST00000583282 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 NID2Q14112 1375 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 ZBED4O75132 1171 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 LARGE1O95461 756 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 TMEM132BQ14DG7 1078 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 CDC37Q16543 378 aaPredicted RBP16.31■□□□□ 0.2
GGA3-216ENST00000583282 BTNL9Q6UXG8 535 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 ADGRF4Q8IZF3 695 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 FBXL16Q8N461 479 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 MB21D1Q8N884 522 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 REPS2Q8NFH8 660 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 CD99L2Q8TCZ2 262 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 ZNF296Q8WUU4 475 aaPredicted RBP16.31■□□□□ 0.2
GGA3-216ENST00000583282 NCOA5Q9HCD5 579 aaKnown RBP16.31■□□□□ 0.2
GGA3-216ENST00000583282 CWC22Q9HCG8 908 aaKnown RBP16.31■□□□□ 0.2
GGA3-216ENST00000583282 RBPJLQ9UBG7 517 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 HPS5Q9UPZ3 1129 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 RABGAP1Q9Y3P9 1069 aa16.31■□□□□ 0.2
GGA3-216ENST00000583282 BAZ2BQ9UIF8 2168 aaKnown RBP16.3■□□□□ 0.2
GGA3-216ENST00000583282 CNTNAP5Q8WYK1 1306 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 PLA2G6O60733 806 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 CDC27P30260 824 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 CTCFP49711 727 aaPredicted RBP16.3■□□□□ 0.2
GGA3-216ENST00000583282 LBX1P52954 281 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 SLC35G1Q2M3R5 365 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 SNRNP48Q6IEG0 339 aaKnown RBP16.3■□□□□ 0.2
GGA3-216ENST00000583282 TMTC3Q6ZXV5 915 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 CCDC82Q8N4S0 544 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 FANCBQ8NB91 859 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 GPRC5AQ8NFJ5 357 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 ARHGAP39Q9C0H5 1083 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 SPATC1LQ9H0A9 340 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 RANBP17Q9H2T7 1088 aaKnown RBP16.3■□□□□ 0.2
GGA3-216ENST00000583282 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 HOMER2Q9NSB8 354 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 RBM28Q9NW13 759 aaKnown RBP16.3■□□□□ 0.2
GGA3-216ENST00000583282 MORF4L1Q9UBU8 362 aa16.3■□□□□ 0.2
GGA3-216ENST00000583282 ST18O60284 1047 aa16.29■□□□□ 0.2
GGA3-216ENST00000583282 FKTNO75072 461 aa16.29■□□□□ 0.2
GGA3-216ENST00000583282 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
GGA3-216ENST00000583282 PDIA3P30101 505 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms