RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 USP17L24Q0WX57 530 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 CCL15Q16663 113 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 SYDE2Q5VT97 1194 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 CATSPERGQ6ZRH7 1159 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 ADGRF4Q8IZF3 695 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 NSUN7Q8NE18 718 aaKnown RBP11.08□□□□□ -0.64
RFFL-210ENST00000582308 CHURC1Q8WUH1 139 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 PHKBQ93100 1093 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 ZIC5Q96T25 663 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 PTPN18Q99952 460 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 SPZ1Q9BXG8 430 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 TANGO6Q9C0B7 1094 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 RIOX1Q9H6W3 641 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 VAT1LQ9HCJ6 419 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 FEM1BQ9UK73 627 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 AGTPBP1Q9UPW5 1226 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 CNTNAP5Q8WYK1 1306 aa11.08□□□□□ -0.64
RFFL-210ENST00000582308 hCG_1642624A0A1W2PR95 340 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 MANSC4A6NHS7 340 aaPredicted RBP11.07□□□□□ -0.64
RFFL-210ENST00000582308 BTBD19C9JJ37 291 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 FLOT1O75955 427 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 STAT2P52630 851 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 C1QTNF8P60827 252 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 CPLX2Q6PUV4 134 aaKnown RBP11.07□□□□□ -0.64
RFFL-210ENST00000582308 PAXIP1Q6ZW49 1069 aaPredicted RBP11.07□□□□□ -0.64
RFFL-210ENST00000582308 FAM160B2Q86V87 743 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 SMARCC2Q8TAQ2 1214 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 MTMR8Q96EF0 704 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 CAPNS2Q96L46 248 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 LLPHQ9BRT6 129 aaKnown RBP11.07□□□□□ -0.64
RFFL-210ENST00000582308 ASCC2Q9H1I8 757 aaPredicted RBP11.07□□□□□ -0.64
RFFL-210ENST00000582308 JMJD4Q9H9V9 463 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 FOXD4L1Q9NU39 408 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 PRR12Q9ULL5 1215 aa11.07□□□□□ -0.64
RFFL-210ENST00000582308 V9GY48 417 aaPredicted RBP11.07□□□□□ -0.64
RFFL-210ENST00000582308 PTPDC1A2A3K4 754 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 PRPF3O43395 683 aaKnown RBP11.06□□□□□ -0.64
RFFL-210ENST00000582308 AOC2O75106 756 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 CDKL5O76039 1030 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
RFFL-210ENST00000582308 FDPSP14324 419 aaKnown RBP11.06□□□□□ -0.64
RFFL-210ENST00000582308 DSG3P32926 999 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 SNAP25P60880 206 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 SSRP1Q08945 709 aaKnown RBP11.06□□□□□ -0.64
RFFL-210ENST00000582308 IKQ13123 557 aaPredicted RBP11.06□□□□□ -0.64
RFFL-210ENST00000582308 GRM1Q13255 1194 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 COG2Q14746 738 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 POTEEQ6S8J3 1075 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 SAMD1Q6SPF0 538 aaPredicted RBP11.06□□□□□ -0.64
RFFL-210ENST00000582308 ANKRD23Q86SG2 305 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 PRPF38AQ8NAV1 312 aaKnown RBP11.06□□□□□ -0.64
RFFL-210ENST00000582308 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 PIBF1Q8WXW3 757 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 KIFC2Q96AC6 838 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 DDX11Q96FC9 970 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 INTS4Q96HW7 963 aaKnown RBP11.06□□□□□ -0.64
RFFL-210ENST00000582308 SLF1Q9BQI6 1058 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 SLC26A6Q9BXS9 759 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 PPP1R9AQ9ULJ8 1098 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 ADAMTS5Q9UNA0 930 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 A0A0G2JMZ2 1700 aa11.06□□□□□ -0.64
RFFL-210ENST00000582308 SPDYE16A6NNV3 312 aaPredicted RBP11.05□□□□□ -0.64
RFFL-210ENST00000582308 PDHXO00330 501 aa11.05□□□□□ -0.64
RFFL-210ENST00000582308 IGF2BP3O00425 579 aaKnown RBP eCLIP11.05□□□□□ -0.64
RFFL-210ENST00000582308 VEGFBP49765 207 aa11.05□□□□□ -0.64
RFFL-210ENST00000582308 INHBEP58166 350 aa11.05□□□□□ -0.64
RFFL-210ENST00000582308 KIF23Q02241 960 aaPredicted RBP11.05□□□□□ -0.64
RFFL-210ENST00000582308 NOGQ13253 232 aa11.05□□□□□ -0.64
RFFL-210ENST00000582308 PKN1Q16512 942 aa11.05□□□□□ -0.64
RFFL-210ENST00000582308 FAM43AQ8N2R8 423 aa11.05□□□□□ -0.64
RFFL-210ENST00000582308 ATG4CQ96DT6 458 aa11.05□□□□□ -0.64
RFFL-210ENST00000582308 PIGSQ96S52 555 aa11.05□□□□□ -0.64
RFFL-210ENST00000582308 P2RX7Q99572 595 aaKnown RBP11.05□□□□□ -0.64
RFFL-210ENST00000582308 RNF26Q9BY78 433 aaPredicted RBP11.05□□□□□ -0.64
RFFL-210ENST00000582308 ORC3Q9UBD5 711 aaPredicted RBP11.05□□□□□ -0.64
RFFL-210ENST00000582308 SLC45A1Q9Y2W3 748 aa11.05□□□□□ -0.64
RFFL-210ENST00000582308 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.05□□□□□ -0.64
RFFL-210ENST00000582308 ZNFX1Q9P2E3 1918 aaKnown RBP11.05□□□□□ -0.64
RFFL-210ENST00000582308 STK36Q9NRP7 1315 aa11.05□□□□□ -0.64
RFFL-210ENST00000582308 DOCK3Q8IZD9 2030 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 VWA5AO00534 786 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 PPP1R11O60927 126 aaPredicted RBP11.04□□□□□ -0.64
RFFL-210ENST00000582308 HSPA6P17066 643 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 OSBPP22059 807 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 GJB2P29033 226 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 TM4SF4P48230 202 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 IRX3P78415 501 aaPredicted RBP11.04□□□□□ -0.64
RFFL-210ENST00000582308 PABPC4Q13310 644 aaKnown RBP eCLIP11.04□□□□□ -0.64
RFFL-210ENST00000582308 QRICH1Q2TAL8 776 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 HOMER1Q86YM7 354 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 IFNL1Q8IU54 200 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 TRIM22Q8IYM9 498 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 REPS2Q8NFH8 660 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 RRP36Q96EU6 259 aaKnown RBP11.04□□□□□ -0.64
RFFL-210ENST00000582308 AIFM3Q96NN9 605 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 IPO9Q96P70 1041 aaKnown RBP11.04□□□□□ -0.64
RFFL-210ENST00000582308 RANBP17Q9H2T7 1088 aaKnown RBP11.04□□□□□ -0.64
RFFL-210ENST00000582308 SLC38A10Q9HBR0 1119 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 HOXC10Q9NYD6 342 aa11.04□□□□□ -0.64
RFFL-210ENST00000582308 SMC3Q9UQE7 1217 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms