RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 LEMD3Q9Y2U8 911 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 XDHP47989 1333 aa7.43□□□□□ -1.22
PTPRM-213ENST00000580949 AKAP11Q9UKA4 1901 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 TGFBR3LH3BV60 316 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 KHNYNO15037 678 aaKnown RBP7.42□□□□□ -1.22
PTPRM-213ENST00000580949 GPAA1O43292 621 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 FGAP02671 866 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 NPR1P16066 1061 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 MX2P20592 715 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 CASTP20810 708 aaKnown RBP7.42□□□□□ -1.22
PTPRM-213ENST00000580949 FGFR3P22607 806 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 SRSF11Q05519 484 aaKnown RBP7.42□□□□□ -1.22
PTPRM-213ENST00000580949 MAP3K12Q12852 859 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 SF3B2Q13435 895 aaKnown RBP7.42□□□□□ -1.22
PTPRM-213ENST00000580949 DGKZQ13574 1117 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 COX20Q5RI15 118 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 ZSCAN25Q6NSZ9 544 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 CAPN12Q6ZSI9 719 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 NOL8Q76FK4 1167 aaKnown RBP7.42□□□□□ -1.22
PTPRM-213ENST00000580949 RUFY3Q7L099 469 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 ADGRA1Q86SQ6 560 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 SP8Q8IXZ3 490 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 MAGEB6Q8N7X4 407 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 TDRD7Q8NHU6 1098 aaKnown RBP7.42□□□□□ -1.22
PTPRM-213ENST00000580949 TBC1D16Q8TBP0 767 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 STRBPQ96SI9 672 aaKnown RBP7.42□□□□□ -1.22
PTPRM-213ENST00000580949 KLK14Q9P0G3 267 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 DENND2AQ9ULE3 1009 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 LRFN2Q9ULH4 789 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 NSFL1CQ9UNZ2 370 aaKnown RBP7.42□□□□□ -1.22
PTPRM-213ENST00000580949 ATP6V0A2Q9Y487 856 aa7.42□□□□□ -1.22
PTPRM-213ENST00000580949 RPAP1Q9BWH6 1393 aaPredicted RBP7.42□□□□□ -1.22
PTPRM-213ENST00000580949 ARAP2Q8WZ64 1704 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 SPEF2Q9C093 1822 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 AK9Q5TCS8 1911 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 DCDC2BA2VCK2 349 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 PRKAB2O43741 272 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 UFL1O94874 794 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 ZKSCAN1P17029 563 aaPredicted RBP7.41□□□□□ -1.22
PTPRM-213ENST00000580949 CHRNA5P30532 468 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 PDE6BP35913 854 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 AK2P54819 239 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 TYRO3Q06418 890 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 CUL4AQ13619 759 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 GRIK5Q16478 980 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 PHLDB3Q6NSJ2 640 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 BTLAQ7Z6A9 289 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 VPS37DQ86XT2 251 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 C2CD5Q86YS7 1000 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 ZGPATQ8N5A5 531 aaKnown RBP7.41□□□□□ -1.22
PTPRM-213ENST00000580949 TCEANC2Q96MN5 208 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 CEP63Q96MT8 703 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 SAP130Q9H0E3 1048 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 ARMT1Q9H993 441 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 PDRG1Q9NUG6 133 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 LRP2BPQ9P2M1 347 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 ABCF2Q9UG63 623 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 DMGDHQ9UI17 866 aaKnown RBP7.41□□□□□ -1.22
PTPRM-213ENST00000580949 GGA1Q9UJY5 639 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 JAG2Q9Y219 1238 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 BCS1LQ9Y276 419 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 CYP46A1Q9Y6A2 500 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 RGPD3A6NKT7 1758 aaPredicted RBP7.41□□□□□ -1.22
PTPRM-213ENST00000580949 RGPD4Q7Z3J3 1758 aa7.41□□□□□ -1.22
PTPRM-213ENST00000580949 MBD4O95243 580 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 LARGE1O95461 756 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 SLURP2P0DP57 97 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 CYP7A1P22680 504 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 RPS6KB1P23443 525 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 MAP2K3P46734 347 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 MCM2P49736 904 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 INSM1Q01101 510 aaPredicted RBP7.4□□□□□ -1.22
PTPRM-213ENST00000580949 CHAF1AQ13111 956 aaPredicted RBP7.4□□□□□ -1.22
PTPRM-213ENST00000580949 NAA30Q147X3 362 aaPredicted RBP7.4□□□□□ -1.22
PTPRM-213ENST00000580949 ALX1Q15699 326 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 STYK1Q6J9G0 422 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 TMC4Q7Z404 712 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 LCORLQ8N3X6 602 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 MIGA1Q8NAN2 632 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 MASTLQ96GX5 879 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 ALDH8A1Q9H2A2 487 aaPredicted RBP7.4□□□□□ -1.22
PTPRM-213ENST00000580949 CHMP5Q9NZZ3 219 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 RAI14Q9P0K7 980 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 SEPT3Q9UH03 358 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 HCN2Q9UL51 889 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 LIMCH1Q9UPQ0 1083 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 TACC3Q9Y6A5 838 aa7.4□□□□□ -1.22
PTPRM-213ENST00000580949 PDS5AQ29RF7 1337 aaKnown RBP7.4□□□□□ -1.22
PTPRM-213ENST00000580949 NRXN2Q9P2S2 1712 aa7.4□□□□□ -1.23
PTPRM-213ENST00000580949 CASZ1Q86V15 1759 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 GSG1L2A8MUP6 293 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 E7EWF7 191 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 H0YIN7 160 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 FRAT2O75474 233 aaPredicted RBP7.39□□□□□ -1.23
PTPRM-213ENST00000580949 IL1R1P14778 569 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 PSMA5P28066 241 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 PRDX5P30044 214 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 ALDH1B1P30837 517 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 HAND2P61296 217 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 DYNLL1P63167 89 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms