RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 PFKFB3Q16875 520 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP3-215ENST00000579780 FAM177A1Q8N128 213 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP3-215ENST00000579780 ZNF713Q8N859 430 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP3-215ENST00000579780 CHURC1Q8WUH1 139 aa19.35■□□□□ 0.69
CDK5RAP3-215ENST00000579780 SLC10A4Q96EP9 437 aa19.35■□□□□ 0.69
CDK5RAP3-215ENST00000579780 CPVLQ9H3G5 476 aa19.35■□□□□ 0.69
CDK5RAP3-215ENST00000579780 CHMP5Q9NZZ3 219 aa19.35■□□□□ 0.69
CDK5RAP3-215ENST00000579780 SEC63Q9UGP8 760 aaKnown RBP19.35■□□□□ 0.69
CDK5RAP3-215ENST00000579780 ZBTB48P10074 688 aaPredicted RBP19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 SCG2P13521 617 aa19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 GJA5P36382 358 aa19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 NUCB2P80303 420 aa19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 DGKZQ13574 1117 aa19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 LARP1BQ659C4 914 aaKnown RBP19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 ADGRF4Q8IZF3 695 aa19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 ALG1Q9BT22 464 aa19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 UBA5Q9GZZ9 404 aa19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 RPAP3Q9H6T3 665 aaPredicted RBP19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 JMJD4Q9H9V9 463 aa19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 V9GY48 417 aaPredicted RBP19.34■□□□□ 0.69
CDK5RAP3-215ENST00000579780 MYPNQ86TC9 1320 aa19.33■□□□□ 0.69
CDK5RAP3-215ENST00000579780 STX6O43752 255 aa19.33■□□□□ 0.68
CDK5RAP3-215ENST00000579780 SLC16A2P36021 539 aa19.33■□□□□ 0.68
CDK5RAP3-215ENST00000579780 IKQ13123 557 aaPredicted RBP19.33■□□□□ 0.68
CDK5RAP3-215ENST00000579780 SNAPC2Q13487 334 aa19.33■□□□□ 0.68
CDK5RAP3-215ENST00000579780 C8orf76Q96K31 380 aa19.33■□□□□ 0.68
CDK5RAP3-215ENST00000579780 PIGSQ96S52 555 aa19.33■□□□□ 0.68
CDK5RAP3-215ENST00000579780 SLF1Q9BQI6 1058 aa19.33■□□□□ 0.68
CDK5RAP3-215ENST00000579780 TANGO6Q9C0B7 1094 aa19.33■□□□□ 0.68
CDK5RAP3-215ENST00000579780 PRR12Q9ULL5 1215 aa19.33■□□□□ 0.68
CDK5RAP3-215ENST00000579780 TLL2Q9Y6L7 1015 aa19.33■□□□□ 0.68
CDK5RAP3-215ENST00000579780 WDR33Q9C0J8 1336 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-215ENST00000579780 ZBTB5O15062 677 aa19.32■□□□□ 0.68
CDK5RAP3-215ENST00000579780 XBP1P17861 261 aa19.32■□□□□ 0.68
CDK5RAP3-215ENST00000579780 CDC37Q16543 378 aaPredicted RBP19.32■□□□□ 0.68
CDK5RAP3-215ENST00000579780 SAPCD2Q86UD0 394 aa19.32■□□□□ 0.68
CDK5RAP3-215ENST00000579780 HOMER1Q86YM7 354 aa19.32■□□□□ 0.68
CDK5RAP3-215ENST00000579780 AIFM3Q96NN9 605 aa19.32■□□□□ 0.68
CDK5RAP3-215ENST00000579780 PPP1R9AQ9ULJ8 1098 aa19.32■□□□□ 0.68
CDK5RAP3-215ENST00000579780 PNMA6FA0A0J9YX94 578 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 BRD1O95696 1058 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 TRIM29Q14134 588 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 SPRYD7Q5W111 196 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 PPP1R18Q6NYC8 613 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 FASTKD5Q7L8L6 764 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 RASAL3Q86YV0 1011 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 CCDC148Q8NFR7 591 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 FBXO18Q8NFZ0 1043 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 HHIPL1Q96JK4 782 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 RANBP17Q9H2T7 1088 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 SH3GLB2Q9NR46 395 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 AGTPBP1Q9UPW5 1226 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 MTMR6Q9Y217 621 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 RBBP6Q7Z6E9 1792 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 MYH15Q9Y2K3 1946 aa19.31■□□□□ 0.68
CDK5RAP3-215ENST00000579780 hCG_1642624A0A1W2PR95 340 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 VPS37CA5D8V6 355 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 TMEM88BA6NKF7 163 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 USP17L15C9J2P7 530 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 USP17L13C9JLJ4 530 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 USP17L11C9JVI0 530 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 USP17L18D6R9N7 530 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 USP17L22D6RA61 530 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 USP17L17D6RBQ6 530 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 USP17L19D6RCP7 530 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 USP17L20D6RJB6 530 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 H3BQV1 296 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 FLOT1O75955 427 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 FDX1P10109 184 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 GTF2A2P52657 109 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 USP17L24Q0WX57 530 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 MOGSQ13724 837 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 PKP1Q13835 747 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 QRICH1Q2TAL8 776 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 IFFO2Q5TF58 517 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 WWC2Q6AWC2 1192 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 PRPF38AQ8NAV1 312 aaKnown RBP19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 CCDC12Q8WUD4 166 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 FBXO28Q9NVF7 368 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 BARHL2Q9NY43 387 aa19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 COL11A1P12107 1806 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-215ENST00000579780 STXBP3O00186 592 aa19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 HOXA7P31268 230 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 PABPC4Q13310 644 aaKnown RBP eCLIP19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 KRT40Q6A162 431 aa19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 RGMBQ6NW40 437 aa19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 GADL1Q6ZQY3 521 aa19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 CATSPERGQ6ZRH7 1159 aa19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 HEATR3Q7Z4Q2 680 aa19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 PIBF1Q8WXW3 757 aa19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 KIFC2Q96AC6 838 aa19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 VAT1LQ9HCJ6 419 aa19.29■□□□□ 0.68
CDK5RAP3-215ENST00000579780 ESYT2A0FGR8 921 aa19.28■□□□□ 0.68
CDK5RAP3-215ENST00000579780 SLC10A3P09131 477 aa19.28■□□□□ 0.68
CDK5RAP3-215ENST00000579780 CETPP11597 493 aa19.28■□□□□ 0.68
CDK5RAP3-215ENST00000579780 FOSBP53539 338 aa19.28■□□□□ 0.68
CDK5RAP3-215ENST00000579780 TRAF1Q13077 416 aa19.28■□□□□ 0.68
CDK5RAP3-215ENST00000579780 TREML2Q5T2D2 321 aa19.28■□□□□ 0.68
CDK5RAP3-215ENST00000579780 GPKOWQ92917 476 aaPredicted RBP eCLIP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms