RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 PNMA3Q9UL41 463 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 AGTPBP1Q9UPW5 1226 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 CTDP1Q9Y5B0 961 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 PHIPQ8WWQ0 1821 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 PTPRFP10586 1907 aa7.86□□□□□ -1.15
PPP4R1-207ENST00000578010 ROBO3Q96MS0 1386 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 CASP8AP2Q9UKL3 1982 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 EPB41L2O43491 1005 aaKnown RBP7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 NDUFB10O96000 172 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 SLC1A4P43007 532 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 SLC4A3P48751 1232 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 LSM11P83369 360 aaKnown RBP eCLIP7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 IKQ13123 557 aaPredicted RBP7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 MOGSQ13724 837 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 COG2Q14746 738 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 WTAPQ15007 396 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 CCDC96Q2M329 555 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 ADCK5Q3MIX3 580 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 TSGA10IPQ3SY00 556 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 KIAA1755Q5JYT7 1200 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 FAM83BQ5T0W9 1011 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 SYNE3Q6ZMZ3 975 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 CATSPERGQ6ZRH7 1159 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 DHX32Q7L7V1 743 aaKnown RBP7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 TMTC2Q8N394 836 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 SMCR8Q8TEV9 937 aaPredicted RBP7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 LPAR1Q92633 364 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 PARK7Q99497 189 aaKnown RBP7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 NUP88Q99567 741 aaPredicted RBP7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 LRRC2Q9BYS8 371 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 ASCC2Q9H1I8 757 aaPredicted RBP7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 R3HDMLQ9H3Y0 253 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 UPF2Q9HAU5 1272 aaKnown RBP7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 GPCPD1Q9NPB8 672 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 SAGE1Q9NXZ1 904 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 CPA4Q9UI42 421 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 NAP1L2Q9ULW6 460 aaPredicted RBP7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 SNX14Q9Y5W7 946 aa7.85□□□□□ -1.15
PPP4R1-207ENST00000578010 TNKSO95271 1327 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 CCDC69A6NI79 296 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 TMEM232C9JQI7 657 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 FLOT1O75955 427 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 HMGB1P09429 215 aaKnown RBP7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 BMP3P12645 472 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 CPA1P15085 419 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 VCAM1P19320 739 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 HOXA7P31268 230 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 CRHR2Q13324 411 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 C8orf34Q49A92 452 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 RCSD1Q6JBY9 416 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 BLOC1S2Q6QNY1 142 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 POTEEQ6S8J3 1075 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 CATIPQ7Z7H3 387 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 CCAR1Q8IX12 1150 aaKnown RBP7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 CHURC1Q8WUH1 139 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 NUP133Q8WUM0 1156 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 ANKS1AQ92625 1134 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 KCNB2Q92953 911 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 ZDHHC16Q969W1 377 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 KIFC2Q96AC6 838 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 C12orf42Q96LP6 360 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 TCEANC2Q96MN5 208 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 EPAS1Q99814 870 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 ZCCHC17Q9NP64 241 aaKnown RBP7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 LOC285556D6RIA3 1793 aa7.84□□□□□ -1.15
PPP4R1-207ENST00000578010 FRMPD2Q68DX3 1309 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 TK2O00142 265 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 GPR25O00155 361 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 WDR46O15213 610 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 TLR2O60603 784 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 FKTNO75072 461 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 ZBED4O75132 1171 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 CASTP20810 708 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 SP3Q02447 781 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 PLS1Q14651 629 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 COL13A1Q5TAT6 717 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 TYW1BQ6NUM6 668 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 KCTD1Q719H9 257 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 MB21D2Q8IYB1 491 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 TNS4Q8IZW8 715 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 ANKRD13CQ8N6S4 541 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 ENAHQ8N8S7 591 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 PNMA1Q8ND90 353 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 GMCL1P1Q8NEA9 526 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 IGDCC4Q8TDY8 1250 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 TMEM87BQ96K49 555 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 PAGR1Q9BTK6 254 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 C22orf23Q9BZE7 217 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 CWC22Q9HCG8 908 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 VAT1LQ9HCJ6 419 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 PRDM10Q9NQV6 1147 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 FEM1BQ9UK73 627 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 SLC45A1Q9Y2W3 748 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 CYP46A1Q9Y6A2 500 aa7.83□□□□□ -1.16
PPP4R1-207ENST00000578010 DHX16O60231 1041 aaKnown RBP7.82□□□□□ -1.16
PPP4R1-207ENST00000578010 FMNL1O95466 1100 aaPredicted RBP7.82□□□□□ -1.16
PPP4R1-207ENST00000578010 PARP1P09874 1014 aaKnown RBP7.82□□□□□ -1.16
PPP4R1-207ENST00000578010 GOLGA8HP0CJ92 632 aa7.82□□□□□ -1.16
PPP4R1-207ENST00000578010 RPS6KB1P23443 525 aa7.82□□□□□ -1.16
PPP4R1-207ENST00000578010 SLC16A2P36021 539 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms