RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 A0A0D9SFI3 127 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 LRRC37A2A6NM11 1700 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 USP17L12C9JPN9 530 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 USP17L21D6R901 530 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 ST18O60284 1047 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 GDF11O95390 407 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.5
NCBP3-203ENST00000574379 GNAT2P19087 354 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 NUBP1P53384 320 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 RAB30Q15771 203 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 SHROOM1Q2M3G4 852 aaPredicted RBP11.9□□□□□ -0.5
NCBP3-203ENST00000574379 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 CTR9Q6PD62 1173 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 PLEKHH3Q7Z736 793 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 HERVK_113Q902F9 699 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 DDRGK1Q96HY6 314 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.9□□□□□ -0.58e-11■■■■□ 21.1
NCBP3-203ENST00000574379 HELLSQ9NRZ9 838 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 GINM1Q9NU53 330 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 MORF4L1Q9UBU8 362 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 ZBTB21Q9ULJ3 1066 aa11.9□□□□□ -0.5
NCBP3-203ENST00000574379 PATL2C9JE40 543 aaKnown RBP11.89□□□□□ -0.51
NCBP3-203ENST00000574379 FOXP2O15409 715 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 GTPBP6O43824 516 aaPredicted RBP11.89□□□□□ -0.51
NCBP3-203ENST00000574379 ASNSP08243 561 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 SDSP20132 328 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 SSTR3P32745 418 aaPredicted RBP11.89□□□□□ -0.51
NCBP3-203ENST00000574379 CYP2C19P33261 490 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 NMIQ13287 307 aaPredicted RBP11.89□□□□□ -0.51
NCBP3-203ENST00000574379 SBK1Q52WX2 424 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 CCDC174Q6PII3 467 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 SLC44A5Q8NCS7 719 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 TBC1D2Q9BYX2 928 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 PORCNQ9H237 461 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 FLRT1Q9NZU1 646 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 ARPP21Q9UBL0 812 aaPredicted RBP11.89□□□□□ -0.51
NCBP3-203ENST00000574379 ROBO3Q96MS0 1386 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 REV3LO60673 3130 aa11.89□□□□□ -0.51
NCBP3-203ENST00000574379 RLFQ13129 1914 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 USP17L5A8MUK1 530 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 TLL1O43897 1013 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 MAP2K5Q13163 448 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 CERKLQ49MI3 558 aaPredicted RBP11.88□□□□□ -0.51
NCBP3-203ENST00000574379 MCMDC2Q4G0Z9 681 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 MORN1Q5T089 497 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 C16orf86Q6ZW13 317 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 AMOTL1Q8IY63 956 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 IFNL3Q8IZI9 196 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 ZNF280CQ8ND82 737 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 DYNLL2Q96FJ2 89 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 CCDC136Q96JN2 1154 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 PHOX2BQ99453 314 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 WDR18Q9BV38 432 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 TXNRD2Q9NNW7 524 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 SWAP70Q9UH65 585 aa11.88□□□□□ -0.51
NCBP3-203ENST00000574379 MYO9BQ13459 2157 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 GH2P01242 217 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 GUCY1A2P33402 732 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 TDO2P48775 406 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 SNX17Q15036 470 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 ABCB5Q2M3G0 1257 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 VPS53Q5VIR6 699 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 PPP2R2DQ66LE6 453 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
NCBP3-203ENST00000574379 AS3MTQ9HBK9 375 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 TMOD4Q9NZQ9 345 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 COG5Q9UP83 839 aa11.87□□□□□ -0.51
NCBP3-203ENST00000574379 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 WDFY4Q6ZS81 3184 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 MINDY4BA8MYZ0 360 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 HIP1O00291 1037 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 KIAA0355O15063 1070 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 APPP05067 770 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 ACRP10323 421 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 CDK8P49336 464 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 HERVK_113P62684 666 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 ERVK-9P63128 1117 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 ERVK-24P63145 666 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 Q3C1V9 767 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 SKAP1Q86WV1 359 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 USP6NLQ92738 828 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 HLA-CQ95604 372 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 NACAP1Q9BZK3 213 aa11.86□□□□□ -0.51
NCBP3-203ENST00000574379 COL11A1P12107 1806 aaPredicted RBP11.86□□□□□ -0.51
NCBP3-203ENST00000574379 AKR1B1P15121 316 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 PPIGQ13427 754 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■□□□□ 10.6
NCBP3-203ENST00000574379 ALX1Q15699 326 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 ERICH6BQ5W0A0 696 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 TRPV1Q8NER1 839 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 NAPBQ9H115 298 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 CABP5Q9NP86 173 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 CD320Q9NPF0 282 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 DIAPH3Q9NSV4 1193 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 IVNS1ABPQ9Y6Y0 642 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 ZMYM6O95789 1325 aa11.85□□□□□ -0.51
NCBP3-203ENST00000574379 A0A0G2JMZ2 1700 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 DCDC2CA8MYV0 355 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms