RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 WDR78Q5VTH9 848 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 FBXO46Q6PJ61 603 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 BLOC1S2Q6QNY1 142 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 SHCBP1Q8NEM2 672 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 IGDCC4Q8TDY8 1250 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 CHMP4CQ96CF2 233 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 JAKMIP1Q96N16 626 aaKnown RBP14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 ARHGAP39Q9C0H5 1083 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 GPCPD1Q9NPB8 672 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 SRRDQ9UH36 339 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 ZSWIM8A7E2V4 1837 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 FRMPD2Q68DX3 1309 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 STAT3P40763 770 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 OAZ1P54368 228 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 BTNL9Q6UXG8 535 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 SYNE3Q6ZMZ3 975 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 TNS4Q8IZW8 715 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 TEX13BQ9BXU2 312 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 MCOLN1Q9GZU1 580 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 MROH8Q9H579 483 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 SLC38A10Q9HBR0 1119 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 PNMA2Q9UL42 364 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 PTPN22Q9Y2R2 807 aa14.91□□□□□ -0.02
TRAPPC1-206ENST00000573989 MYH6P13533 1939 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 SH2B2O14492 632 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 ATP2A1O14983 1001 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 STRNO43815 780 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 CALM1P0DP23 149 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 CALM2P0DP24 149 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 CALM3P0DP25 149 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 TMEM132BQ14DG7 1078 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 ADCK5Q3MIX3 580 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 SYDE2Q5VT97 1194 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 GPR142Q7Z601 462 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 PLEKHH3Q7Z736 793 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 NCAPG2Q86XI2 1143 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 RIOX2Q8IUF8 465 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 RAET1EQ8TD07 263 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 SOCS4Q8WXH5 440 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 MAP3K14Q99558 947 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 NUDT12Q9BQG2 462 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 MOV10L1Q9BXT6 1211 aaKnown RBP14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 LY9Q9HBG7 655 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 PRR12Q9ULL5 1215 aa14.9□□□□□ -0.02
TRAPPC1-206ENST00000573989 PLXNB2O15031 1838 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 PEX10O60683 326 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 DDAH1O94760 285 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 ERCC3P19447 782 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 CASTP20810 708 aaKnown RBP14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 CTGFP29279 349 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 KIF5BP33176 963 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 ANAPC15P60006 121 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 EXOSC10Q01780 885 aaKnown RBP14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 SNRNP48Q6IEG0 339 aaKnown RBP14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 POTEEQ6S8J3 1075 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 NBPF11Q86T75 865 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 ZNF654Q8IZM8 581 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 CPXCR1Q8N123 301 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 CTCFLQ8NI51 663 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 PORCNQ9H237 461 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 ZNF214Q9UL59 606 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 SLC12A7Q9Y666 1083 aa14.89□□□□□ -0.03
TRAPPC1-206ENST00000573989 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 SLC15A5A6NIM6 579 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 DHX16O60231 1041 aaKnown RBP14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 GOLGA8HP0CJ92 632 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 SLC16A2P36021 539 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 PRKCZQ05513 592 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 C8orf34Q49A92 452 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 TTBK2Q6IQ55 1244 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 RASGRP2Q7LDG7 609 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 SGMS1Q86VZ5 419 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 REPS2Q8NFH8 660 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 NUP133Q8WUM0 1156 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 LRRC2Q9BYS8 371 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 TM6SF1Q9BZW5 370 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 UPF2Q9HAU5 1272 aaKnown RBP14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 RAVER2Q9HCJ3 691 aaKnown RBP14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 SLC5A4Q9NY91 659 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 FBXO40Q9UH90 709 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 CYP46A1Q9Y6A2 500 aa14.88□□□□□ -0.03
TRAPPC1-206ENST00000573989 KLRF2D3W0D1 207 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 FCER1AP12319 257 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 RPS6KB1P23443 525 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 RGS2P41220 211 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 SLC4A3P48751 1232 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 FLT3LGP49771 235 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 GNAQP50148 359 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 CAP1Q01518 475 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 TROAPQ12815 778 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 GRM4Q14833 912 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 TKFCQ3LXA3 575 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 RUFY3Q7L099 469 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 TRMT44Q8IYL2 757 aaKnown RBP14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 ABRAQ8N0Z2 381 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 CHST13Q8NET6 341 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 LZTS2Q9BRK4 669 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 RANBP17Q9H2T7 1088 aaKnown RBP14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 MAD2L2Q9UI95 211 aa14.87□□□□□ -0.03
TRAPPC1-206ENST00000573989 PALM3A6NDB9 673 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms