RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
CIITA-208ENST00000572665 ZNF804AQ7Z570 1209 aa11.66□□□□□ -0.54
CIITA-208ENST00000572665 GTPBP3Q969Y2 492 aaKnown RBP11.66□□□□□ -0.54
CIITA-208ENST00000572665 NIF3L1Q9GZT8 377 aa11.66□□□□□ -0.54
CIITA-208ENST00000572665 C11orf16Q9NQ32 467 aa11.66□□□□□ -0.54
CIITA-208ENST00000572665 COL1A1P02452 1464 aaPredicted RBP11.65□□□□□ -0.54
CIITA-208ENST00000572665 WNT10BO00744 389 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 MYO1BO43795 1136 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 XYLBO75191 536 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 CASP7P55210 303 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 LAMC2Q13753 1193 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 PDE12Q6L8Q7 609 aaKnown RBP11.65□□□□□ -0.54
CIITA-208ENST00000572665 XKR5Q6UX68 686 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 DLK2Q6UY11 383 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 ARMC9Q7Z3E5 817 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 ABHD17AQ96GS6 310 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 MCOLN1Q9GZU1 580 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 C9orf78Q9NZ63 289 aaPredicted RBP11.65□□□□□ -0.54
CIITA-208ENST00000572665 HCN2Q9UL51 889 aa11.65□□□□□ -0.54
CIITA-208ENST00000572665 ECM29Q5VYK3 1845 aa11.65□□□□□ -0.55
CIITA-208ENST00000572665 GRM8O00222 908 aa11.64□□□□□ -0.55
CIITA-208ENST00000572665 TRPA1O75762 1119 aa11.64□□□□□ -0.55
CIITA-208ENST00000572665 ALDH1L1O75891 902 aa11.64□□□□□ -0.55
CIITA-208ENST00000572665 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
CIITA-208ENST00000572665 SREBF2Q12772 1141 aa11.64□□□□□ -0.55
CIITA-208ENST00000572665 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
CIITA-208ENST00000572665 C15orf52Q6ZUT6 534 aaKnown RBP11.64□□□□□ -0.55
CIITA-208ENST00000572665 RASAL3Q86YV0 1011 aa11.64□□□□□ -0.55
CIITA-208ENST00000572665 KIAA0825Q8IV33 1275 aa11.64□□□□□ -0.55
CIITA-208ENST00000572665 GIPC2Q8TF65 315 aa11.64□□□□□ -0.55
CIITA-208ENST00000572665 CD209Q9NNX6 404 aa11.64□□□□□ -0.55
CIITA-208ENST00000572665 RNF186Q9NXI6 227 aa11.64□□□□□ -0.55
CIITA-208ENST00000572665 ZNF646O15015 1829 aaPredicted RBP11.64□□□□□ -0.55
CIITA-208ENST00000572665 ASTN2O75129 1339 aaPredicted RBP11.63□□□□□ -0.55
CIITA-208ENST00000572665 FKBP1AP62942 108 aaKnown RBP11.63□□□□□ -0.55
CIITA-208ENST00000572665 DLGAP5Q15398 846 aa11.63□□□□□ -0.55
CIITA-208ENST00000572665 BEND3Q5T5X7 828 aa11.63□□□□□ -0.55
CIITA-208ENST00000572665 LDHAL6AQ6ZMR3 332 aa11.63□□□□□ -0.55
CIITA-208ENST00000572665 CSRNP1Q96S65 589 aa11.63□□□□□ -0.55
CIITA-208ENST00000572665 CNNM1Q9NRU3 951 aa11.63□□□□□ -0.55
CIITA-208ENST00000572665 ATXN7L1Q9ULK2 861 aaPredicted RBP11.63□□□□□ -0.55
CIITA-208ENST00000572665 PPP2R3BQ9Y5P8 575 aa11.63□□□□□ -0.55
CIITA-208ENST00000572665 A0A1B0GUL6 1792 aa11.62□□□□□ -0.55
CIITA-208ENST00000572665 CDC14CA4D256 554 aa11.62□□□□□ -0.55
CIITA-208ENST00000572665 ZNF16P17020 682 aaPredicted RBP11.62□□□□□ -0.55
CIITA-208ENST00000572665 MAPK8P45983 427 aa11.62□□□□□ -0.55
CIITA-208ENST00000572665 RBM25P49756 843 aaKnown RBP11.62□□□□□ -0.55
CIITA-208ENST00000572665 RGS19P49795 217 aa11.62□□□□□ -0.55
CIITA-208ENST00000572665 ZNF438Q7Z4V0 828 aa11.62□□□□□ -0.55
CIITA-208ENST00000572665 TXNRD3Q86VQ6 643 aa11.62□□□□□ -0.55
CIITA-208ENST00000572665 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
CIITA-208ENST00000572665 NANOS1Q8WY41 292 aaKnown RBP11.62□□□□□ -0.55
CIITA-208ENST00000572665 SRCIN1Q9C0H9 1055 aa11.62□□□□□ -0.55
CIITA-208ENST00000572665 WTIPA6NIX2 430 aaPredicted RBP11.61□□□□□ -0.55
CIITA-208ENST00000572665 UNCXA6NJT0 531 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 F6X3S4 739 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 SASH1O94885 1247 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 IL1R1P14778 569 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 FOXO4P98177 505 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 PKN2Q16513 984 aaKnown RBP11.61□□□□□ -0.55
CIITA-208ENST00000572665 SUPT20HL1Q3ZLR7 823 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 SLC4A10Q6U841 1118 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 VWA5B2Q8N398 1253 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 MXD3Q9BW11 206 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 ELP3Q9H9T3 547 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 MARK1Q9P0L2 795 aa11.61□□□□□ -0.55
CIITA-208ENST00000572665 UBE2Q2LH0YL09 131 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 TAF5LO75529 589 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 CD33P20138 364 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 TM4SF4P48230 202 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 INHBEP58166 350 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 TAGLNQ01995 201 aaKnown RBP11.6□□□□□ -0.55
CIITA-208ENST00000572665 ORC1Q13415 861 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 TNFAIP1Q13829 316 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 CCINQ13939 588 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 GRIN2CQ14957 1233 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 CTU1Q7Z7A3 348 aaKnown RBP11.6□□□□□ -0.55
CIITA-208ENST00000572665 CFHR5Q9BXR6 569 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 GSX2Q9BZM3 304 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 TMEM63CQ9P1W3 806 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 PHF24Q9UPV7 400 aa11.6□□□□□ -0.55
CIITA-208ENST00000572665 GPR25O00155 361 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 PLIN1O60240 522 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 TNFRSF21O75509 655 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 NEFLP07196 543 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 KLRK1P26718 216 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
CIITA-208ENST00000572665 UBE4AQ14139 1066 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 ENOX2Q16206 610 aaKnown RBP11.59□□□□□ -0.55
CIITA-208ENST00000572665 FOXR1Q6PIV2 292 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 SV2AQ7L0J3 742 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 SNX29Q8TEQ0 813 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 DEFB129Q9H1M3 183 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 FOXD3Q9UJU5 478 aaPredicted RBP11.59□□□□□ -0.55
CIITA-208ENST00000572665 ANGEL1Q9UNK9 670 aaKnown RBP11.59□□□□□ -0.55
CIITA-208ENST00000572665 PTPRCP08575 1304 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 MROH5Q6ZUA9 1318 aa11.59□□□□□ -0.55
CIITA-208ENST00000572665 MANSC4A6NHS7 340 aaPredicted RBP11.58□□□□□ -0.56
CIITA-208ENST00000572665 FGFR3P22607 806 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms