RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SLC38A10Q9HBR0 1119 aa20.28■□□□□ 0.84
MAP1LC3B-208ENST00000570189 A0A1W2PPC1 479 aa20.27■□□□□ 0.84
MAP1LC3B-208ENST00000570189 SEPT4O43236 478 aa20.27■□□□□ 0.84
MAP1LC3B-208ENST00000570189 ZNF792Q3KQV3 632 aa20.27■□□□□ 0.84
MAP1LC3B-208ENST00000570189 MSL3Q8N5Y2 521 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3B-208ENST00000570189 MMP19Q99542 508 aa20.27■□□□□ 0.84
MAP1LC3B-208ENST00000570189 CCDC171Q6TFL3 1326 aa20.27■□□□□ 0.83
MAP1LC3B-208ENST00000570189 RAD21O60216 631 aa20.26■□□□□ 0.83
MAP1LC3B-208ENST00000570189 FGAP02671 866 aa20.26■□□□□ 0.83
MAP1LC3B-208ENST00000570189 HSPD1P10809 573 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3B-208ENST00000570189 PCP11498 1178 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3B-208ENST00000570189 NT5C2P49902 561 aa20.26■□□□□ 0.83
MAP1LC3B-208ENST00000570189 FXR1P51114 621 aaKnown RBP eCLIP20.26■□□□□ 0.83
MAP1LC3B-208ENST00000570189 KCTD2Q14681 263 aa20.26■□□□□ 0.83
MAP1LC3B-208ENST00000570189 FAM47AQ5JRC9 791 aa20.26■□□□□ 0.83
MAP1LC3B-208ENST00000570189 SLFN13Q68D06 897 aa20.26■□□□□ 0.83
MAP1LC3B-208ENST00000570189 IL17RBQ9NRM6 502 aa20.26■□□□□ 0.83
MAP1LC3B-208ENST00000570189 TSPY2A6NKD2 308 aa20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 DNM1LO00429 736 aa20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 BMP3P12645 472 aa20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 MFAP1P55081 439 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 CTDSPL2Q05D32 466 aa20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 NMIQ13287 307 aaPredicted RBP20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 SNRNP48Q6IEG0 339 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 CHRDL2Q6WN34 429 aa20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 LRRC47Q8N1G4 583 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 TCP11L1Q9NUJ3 509 aa20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
MAP1LC3B-208ENST00000570189 DNAJC25-GNG10A0A024R161 153 aa20.24■□□□□ 0.83
MAP1LC3B-208ENST00000570189 TRIM6-TRIM34B2RNG4 842 aa20.24■□□□□ 0.83
MAP1LC3B-208ENST00000570189 ZBED4O75132 1171 aa20.24■□□□□ 0.83
MAP1LC3B-208ENST00000570189 SDSP20132 328 aa20.24■□□□□ 0.83
MAP1LC3B-208ENST00000570189 B4GALNT3Q6L9W6 998 aa20.24■□□□□ 0.83
MAP1LC3B-208ENST00000570189 SAMD1Q6SPF0 538 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3B-208ENST00000570189 ZNF589Q86UQ0 364 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3B-208ENST00000570189 FAM160B2Q86V87 743 aa20.24■□□□□ 0.83
MAP1LC3B-208ENST00000570189 TINF2Q9BSI4 451 aa20.24■□□□□ 0.83
MAP1LC3B-208ENST00000570189 PCDH10Q9P2E7 1040 aa20.24■□□□□ 0.83
MAP1LC3B-208ENST00000570189 STAT2P52630 851 aa20.23■□□□□ 0.83
MAP1LC3B-208ENST00000570189 MAMDC4Q6UXC1 1216 aa20.23■□□□□ 0.83
MAP1LC3B-208ENST00000570189 ZNF467Q7Z7K2 595 aaPredicted RBP20.23■□□□□ 0.83
MAP1LC3B-208ENST00000570189 CHST13Q8NET6 341 aa20.23■□□□□ 0.83
MAP1LC3B-208ENST00000570189 CHURC1Q8WUH1 139 aa20.23■□□□□ 0.83
MAP1LC3B-208ENST00000570189 RBM27Q9P2N5 1060 aaKnown RBP20.23■□□□□ 0.83
MAP1LC3B-208ENST00000570189 FBXO40Q9UH90 709 aa20.23■□□□□ 0.83
MAP1LC3B-208ENST00000570189 RIPK3Q9Y572 518 aa20.23■□□□□ 0.83
MAP1LC3B-208ENST00000570189 SYNGAP1Q96PV0 1343 aa20.23■□□□□ 0.83
MAP1LC3B-208ENST00000570189 HIP1O00291 1037 aa20.22■□□□□ 0.83
MAP1LC3B-208ENST00000570189 CNGA1P29973 690 aa20.22■□□□□ 0.83
MAP1LC3B-208ENST00000570189 BMP8BP34820 402 aa20.22■□□□□ 0.83
MAP1LC3B-208ENST00000570189 ARRDC4Q8NCT1 418 aa20.22■□□□□ 0.83
MAP1LC3B-208ENST00000570189 STAG1Q8WVM7 1258 aa20.22■□□□□ 0.83
MAP1LC3B-208ENST00000570189 RILPL2Q969X0 211 aa20.22■□□□□ 0.83
MAP1LC3B-208ENST00000570189 GDF15Q99988 308 aa20.22■□□□□ 0.83
MAP1LC3B-208ENST00000570189 STX8Q9UNK0 236 aa20.22■□□□□ 0.83
MAP1LC3B-208ENST00000570189 MCM3APO60318 1980 aa20.21■□□□□ 0.83
MAP1LC3B-208ENST00000570189 PGK2P07205 417 aa20.21■□□□□ 0.83
MAP1LC3B-208ENST00000570189 SLC1A4P43007 532 aa20.21■□□□□ 0.83
MAP1LC3B-208ENST00000570189 RCSD1Q6JBY9 416 aa20.21■□□□□ 0.83
MAP1LC3B-208ENST00000570189 KIFC2Q96AC6 838 aa20.21■□□□□ 0.83
MAP1LC3B-208ENST00000570189 INCENPQ9NQS7 918 aa20.21■□□□□ 0.83
MAP1LC3B-208ENST00000570189 SUPT16HQ9Y5B9 1047 aaKnown RBP20.21■□□□□ 0.83
MAP1LC3B-208ENST00000570189 TMEM232C9JQI7 657 aa20.2■□□□□ 0.82
MAP1LC3B-208ENST00000570189 RANBP6O60518 1105 aaKnown RBP20.2■□□□□ 0.82
MAP1LC3B-208ENST00000570189 C7orf61Q8IZ16 206 aa20.2■□□□□ 0.82
MAP1LC3B-208ENST00000570189 DCAF4Q8WV16 495 aa20.2■□□□□ 0.82
MAP1LC3B-208ENST00000570189 NMT2O60551 498 aa20.19■□□□□ 0.82
MAP1LC3B-208ENST00000570189 LRRC26Q2I0M4 334 aa20.19■□□□□ 0.82
MAP1LC3B-208ENST00000570189 TKFCQ3LXA3 575 aa20.19■□□□□ 0.82
MAP1LC3B-208ENST00000570189 AKNAD1Q5T1N1 836 aa20.19■□□□□ 0.82
MAP1LC3B-208ENST00000570189 TTC14Q96N46 770 aa20.19■□□□□ 0.82
MAP1LC3B-208ENST00000570189 RAVER2Q9HCJ3 691 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-208ENST00000570189 CTDP1Q9Y5B0 961 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3B-208ENST00000570189 ZNF536O15090 1300 aa20.19■□□□□ 0.82
MAP1LC3B-208ENST00000570189 ZNF865P0CJ78 1059 aaPredicted RBP20.18■□□□□ 0.82
MAP1LC3B-208ENST00000570189 MCCP23508 829 aa20.18■□□□□ 0.82
MAP1LC3B-208ENST00000570189 SNX17Q15036 470 aa20.18■□□□□ 0.82
MAP1LC3B-208ENST00000570189 C1orf53Q5VUE5 145 aa20.18■□□□□ 0.82
MAP1LC3B-208ENST00000570189 BTNL9Q6UXG8 535 aa20.18■□□□□ 0.82
MAP1LC3B-208ENST00000570189 CPXCR1Q8N123 301 aa20.18■□□□□ 0.82
MAP1LC3B-208ENST00000570189 RNF41Q9H4P4 317 aaPredicted RBP20.18■□□□□ 0.82
MAP1LC3B-208ENST00000570189 LCTP09848 1927 aa20.17■□□□□ 0.82
MAP1LC3B-208ENST00000570189 TOP1P11387 765 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3B-208ENST00000570189 PRAMEF19Q5SWL8 479 aa20.17■□□□□ 0.82
MAP1LC3B-208ENST00000570189 MFSD6Q6ZSS7 791 aa20.17■□□□□ 0.82
MAP1LC3B-208ENST00000570189 DDX11Q96FC9 970 aa20.17■□□□□ 0.82
MAP1LC3B-208ENST00000570189 DSCC1Q9BVC3 393 aa20.17■□□□□ 0.82
MAP1LC3B-208ENST00000570189 SENP6Q9GZR1 1112 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3B-208ENST00000570189 DIAPH3Q9NSV4 1193 aa20.17■□□□□ 0.82
MAP1LC3B-208ENST00000570189 LTBP2Q14767 1821 aa20.17■□□□□ 0.82
MAP1LC3B-208ENST00000570189 LRRC37A2A6NM11 1700 aa20.16■□□□□ 0.82
MAP1LC3B-208ENST00000570189 KBTBD13C9JR72 458 aa20.16■□□□□ 0.82
MAP1LC3B-208ENST00000570189 RARBP10826 455 aa20.16■□□□□ 0.82
MAP1LC3B-208ENST00000570189 AKR1A1P14550 325 aa20.16■□□□□ 0.82
MAP1LC3B-208ENST00000570189 LRRC41Q15345 812 aa20.16■□□□□ 0.82
MAP1LC3B-208ENST00000570189 FGD4Q96M96 766 aa20.16■□□□□ 0.82
MAP1LC3B-208ENST00000570189 TMEM47Q9BQJ4 181 aa20.16■□□□□ 0.82
MAP1LC3B-208ENST00000570189 ACAD9Q9H845 621 aa20.16■□□□□ 0.82
MAP1LC3B-208ENST00000570189 CNPY2Q9Y2B0 182 aa20.16■□□□□ 0.82
MAP1LC3B-208ENST00000570189 SZT2Q5T011 3432 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms