RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 LATS2Q9NRM7 1088 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 ECHDC1Q9NTX5 307 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 TTC41PQ6P2S7 1318 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 SALL3Q9BXA9 1300 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 CDHR2Q9BYE9 1310 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 CNTNAP4Q9C0A0 1308 aa7.46□□□□□ -1.22
CAPN3-218ENST00000568153 ANKRD18BA2A2Z9 1011 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 EYA2O00167 538 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 RGS9O75916 674 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-218ENST00000568153 GLRX3O76003 335 aaKnown RBP7.45□□□□□ -1.22
CAPN3-218ENST00000568153 CIAO1O76071 339 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 SPATA31C1P0DKV0 1188 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 AFF1P51825 1210 aaKnown RBP7.45□□□□□ -1.22
CAPN3-218ENST00000568153 TFCP2Q12800 502 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 GRIK5Q16478 980 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 TAF7LQ5H9L4 462 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 PEAR1Q5VY43 1037 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-218ENST00000568153 SYNE4Q8N205 404 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 TTLL11Q8NHH1 800 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 EAF2Q96CJ1 260 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-218ENST00000568153 SPACA7Q96KW9 195 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 TBC1D32Q96NH3 1257 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 CCDC8Q9H0W5 538 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-218ENST00000568153 RBSNQ9H1K0 784 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 DNAJC25Q9H1X3 360 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 RASSF4Q9H2L5 321 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 NARFQ9UHQ1 456 aa7.45□□□□□ -1.22
CAPN3-218ENST00000568153 NIP7Q9Y221 180 aaKnown RBP eCLIP7.45□□□□□ -1.22
CAPN3-218ENST00000568153 USP42Q9H9J4 1324 aaKnown RBP7.45□□□□□ -1.22
CAPN3-218ENST00000568153 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 SPDYE3A6NKU9 549 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 FAM177BA6PVY3 158 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 MSTNO14793 375 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 TRPA1O75762 1119 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 TRIM37O94972 964 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 P4HBP07237 508 aaKnown RBP7.44□□□□□ -1.22
CAPN3-218ENST00000568153 RFC4P35249 363 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 CHRNA4P43681 627 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 MAPK8P45983 427 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 CTSWP56202 376 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 ENOX2Q16206 610 aaKnown RBP7.44□□□□□ -1.22
CAPN3-218ENST00000568153 TSHZ3Q63HK5 1081 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 ATG9AQ7Z3C6 839 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 CD163Q86VB7 1156 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 GALNT12Q8IXK2 581 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 CNTROBQ8N137 903 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 PI4K2BQ8TCG2 481 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 TTC9Q92623 222 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 SETDB2Q96T68 719 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 GPR108Q9NPR9 543 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 DZANK1Q9NVP4 752 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 AKAP2Q9Y2D5 859 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 GLI3P10071 1580 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 SH3TC1Q8TE82 1336 aa7.44□□□□□ -1.22
CAPN3-218ENST00000568153 PNMA6FA0A0J9YX94 578 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 C1QTNF9BB2RNN3 333 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 FAM229AH3BQW9 127 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 NFKBIEO00221 500 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 REC8O95072 547 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 EDN3P14138 238 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 HCLS1P14317 486 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-218ENST00000568153 ATP5JP18859 108 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 CHMLP26374 656 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 LRRC24Q50LG9 513 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 TNNI3KQ59H18 835 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 SLC10A5Q5PT55 438 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 ADAMTSL4Q6UY14 1074 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 TPTE2Q6XPS3 522 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 LDHAL6AQ6ZMR3 332 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 NPAS4Q8IUM7 802 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 CCDC74AQ96AQ1 378 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 EVI5LQ96CN4 794 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 NEUROD6Q96NK8 337 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 HHIPQ96QV1 700 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 ZKSCAN3Q9BRR0 538 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 USP26Q9BXU7 913 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 PBX4Q9BYU1 374 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 NYXQ9GZU5 481 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 NPHS2Q9NP85 383 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 TRIM33Q9UPN9 1127 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 FPGT-TNNI3KV9GXZ4 949 aa7.43□□□□□ -1.22
CAPN3-218ENST00000568153 PAPPAQ13219 1627 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 C5P01031 1676 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 TOGARAM1Q9Y4F4 1720 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 UBR2Q8IWV8 1755 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 PLSCR1O15162 318 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 MAP4K4O95819 1239 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-218ENST00000568153 RBM25P49756 843 aaKnown RBP7.42□□□□□ -1.22
CAPN3-218ENST00000568153 TIMM10P62072 90 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 BECN1Q14457 450 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 CCDC152Q4G0S7 254 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 PRRT3Q5FWE3 981 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 CEP135Q66GS9 1140 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 RUFY2Q8WXA3 655 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 OSMRQ99650 979 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 PUS3Q9BZE2 481 aaKnown RBP7.42□□□□□ -1.22
CAPN3-218ENST00000568153 GREM2Q9H772 168 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 CNNM1Q9NRU3 951 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 WWC3Q9ULE0 1092 aa7.42□□□□□ -1.22
CAPN3-218ENST00000568153 RIPOR2Q9Y4F9 1068 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms