RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 TMEM82A0PJX8 343 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 DDAH1O94760 285 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 RNASE1P07998 156 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 IRAK1P51617 712 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 CLEC16AQ2KHT3 1053 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 HEATR6Q6AI08 1181 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 CRTC3Q6UUV7 619 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 CBLL1Q75N03 491 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 TP53INP2Q8IXH6 220 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 LINC00116Q8NCU8 138 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 DRC1Q96MC2 740 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 WHRNQ9P202 907 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 EBF1Q9UH73 591 aa6.13□□□□□ -1.43
HERPUD1-212ENST00000567944 ANKRD34BA5PLL1 514 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 H0Y8X5 98 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 MEIS1O00470 390 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 CAPNS1P04632 268 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 TAL1P17542 331 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 CEBPAP49715 358 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 EGR3Q06889 387 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 ZNF792Q3KQV3 632 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 RALGPS1Q5JS13 557 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 NBPF6Q5VWK0 638 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 SLC23A3Q6PIS1 610 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 CKAP2LQ8IYA6 745 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 ARHGEF39Q8N4T4 335 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 FIBCD1Q8N539 461 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 ADCY4Q8NFM4 1077 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 NBPF4Q96M43 638 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 DNAJC2Q99543 621 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 MCMBPQ9BTE3 642 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 G6PC3Q9BUM1 346 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 HIRIP3Q9BW71 556 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 LGR4Q9BXB1 951 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 FOXP3Q9BZS1 431 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 ASCC2Q9H1I8 757 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 ADGRE2Q9UHX3 823 aa6.12□□□□□ -1.43
HERPUD1-212ENST00000567944 DNAJC25-GNG10A0A024R161 153 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 SUSD5O60279 629 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 ZNF205O95201 554 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 ITGA4P13612 1032 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 BMP8BP34820 402 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 ZNF143P52747 638 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 PLCL1Q15111 1095 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 TCEAL1Q15170 157 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 RTP2Q5QGT7 225 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 NOL9Q5SY16 702 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 ZPBP2Q6X784 338 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 AGBL5Q8NDL9 886 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 RCC1LQ96I51 464 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 ADAMTS10Q9H324 1103 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 NOL6Q9H6R4 1146 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 PPP1R1BQ9UD71 204 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 RNF114Q9Y508 228 aa6.11□□□□□ -1.43
HERPUD1-212ENST00000567944 SYPP08247 313 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 VAV1P15498 845 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 LTKP29376 864 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 SLC10A6Q3KNW5 377 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 RNF111Q6ZNA4 994 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 LRRN4CLQ8ND94 238 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 PI4K2BQ8TCG2 481 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 MRGPRX3Q96LB0 322 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 SLC12A9Q9BXP2 914 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 SP110Q9HB58 689 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 CGGBP1Q9UFW8 167 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 TCFL5Q9UL49 500 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 DIS3Q9Y2L1 958 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 EMC9Q9Y3B6 208 aa6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 R3HCC1Q9Y3T6 440 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-212ENST00000567944 TBX1O43435 398 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 GSNP06396 782 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 ZGLP1P0C6A0 271 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 PCBP3P57721 371 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 CYP4F3Q08477 520 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 PPP2R5DQ14738 602 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 ADAT2Q7Z6V5 191 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 LINC01599Q8WXQ3 324 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 FCRL3Q96P31 734 aaPredicted RBP6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 ALPK1Q96QP1 1244 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 APBA2Q99767 749 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 DSCC1Q9BVC3 393 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 TRIM55Q9BYV6 548 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 GBP3Q9H0R5 595 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 SLAMF8Q9P0V8 285 aa6.09□□□□□ -1.43
HERPUD1-212ENST00000567944 FAM221BA6H8Z2 402 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 VAMP4O75379 141 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 PPM1BO75688 479 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 ITGAVP06756 1048 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 RASA3Q14644 834 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 TMEM52Q8NDY8 209 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 BVESQ8NE79 360 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 UBXN4Q92575 508 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 ZDHHC15Q96MV8 337 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 CCDC113Q9H0I3 377 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 SIRPGQ9P1W8 387 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 CTNND2Q9UQB3 1225 aa6.08□□□□□ -1.44
HERPUD1-212ENST00000567944 NOTOA8MTQ0 251 aa6.07□□□□□ -1.44
HERPUD1-212ENST00000567944 FKTNO75072 461 aa6.07□□□□□ -1.44
HERPUD1-212ENST00000567944 EFEMP2O95967 443 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms