RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 COPB2P35606 906 aa23.69■■□□□ 1.38
RNF40-210ENST00000566811 CCNA1P78396 465 aa23.69■■□□□ 1.38
RNF40-210ENST00000566811 SP3Q02447 781 aa23.69■■□□□ 1.38
RNF40-210ENST00000566811 ERO1AQ96HE7 468 aa23.69■■□□□ 1.38
RNF40-210ENST00000566811 OAZ1P54368 228 aa23.68■■□□□ 1.38
RNF40-210ENST00000566811 KIF22Q14807 665 aa23.68■■□□□ 1.38
RNF40-210ENST00000566811 GRM4Q14833 912 aa23.68■■□□□ 1.38
RNF40-210ENST00000566811 PPP2R5BQ15173 497 aa23.68■■□□□ 1.38
RNF40-210ENST00000566811 ANKRD1Q15327 319 aa23.68■■□□□ 1.38
RNF40-210ENST00000566811 KCTD1Q719H9 257 aa23.68■■□□□ 1.38
RNF40-210ENST00000566811 GPRC5AQ8NFJ5 357 aa23.68■■□□□ 1.38
RNF40-210ENST00000566811 CTCFLQ8NI51 663 aaPredicted RBP23.68■■□□□ 1.38
RNF40-210ENST00000566811 CPA4Q9UI42 421 aa23.68■■□□□ 1.38
RNF40-210ENST00000566811 NID2Q14112 1375 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 VWA5AO00534 786 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 ATP2A1O14983 1001 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 GNRH1P01148 92 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 GNAQP50148 359 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 ERVK-9P63128 1117 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 ERVK-24P63145 666 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 ANKRD13CQ8N6S4 541 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 ATG4CQ96DT6 458 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 ALDH8A1Q9H2A2 487 aaPredicted RBP23.67■■□□□ 1.38
RNF40-210ENST00000566811 FBXO28Q9NVF7 368 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 PCDH10Q9P2E7 1040 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 MTMR7Q9Y216 660 aa23.67■■□□□ 1.38
RNF40-210ENST00000566811 CTDP1Q9Y5B0 961 aaPredicted RBP23.67■■□□□ 1.38
RNF40-210ENST00000566811 ZBED4O75132 1171 aa23.66■■□□□ 1.38
RNF40-210ENST00000566811 LACTBP83111 547 aaPredicted RBP23.66■■□□□ 1.38
RNF40-210ENST00000566811 APOA5Q6Q788 366 aa23.66■■□□□ 1.38
RNF40-210ENST00000566811 Q6ZUG5 572 aa23.66■■□□□ 1.38
RNF40-210ENST00000566811 ZNF296Q8WUU4 475 aaPredicted RBP23.66■■□□□ 1.38
RNF40-210ENST00000566811 KIFC2Q96AC6 838 aa23.66■■□□□ 1.38
RNF40-210ENST00000566811 LZTS2Q9BRK4 669 aa23.66■■□□□ 1.38
RNF40-210ENST00000566811 LRRC2Q9BYS8 371 aa23.66■■□□□ 1.38
RNF40-210ENST00000566811 SLC38A10Q9HBR0 1119 aa23.66■■□□□ 1.38
RNF40-210ENST00000566811 ZNF236Q9UL36 1845 aa23.66■■□□□ 1.38
RNF40-210ENST00000566811 FRMPD2Q68DX3 1309 aaPredicted RBP23.65■■□□□ 1.38
RNF40-210ENST00000566811 PALM3A6NDB9 673 aaPredicted RBP23.65■■□□□ 1.38
RNF40-210ENST00000566811 EVCP57679 992 aa23.65■■□□□ 1.38
RNF40-210ENST00000566811 COL9A3Q14050 684 aaPredicted RBP23.65■■□□□ 1.38
RNF40-210ENST00000566811 SYDE2Q5VT97 1194 aa23.65■■□□□ 1.38
RNF40-210ENST00000566811 PAGR1Q9BTK6 254 aa23.65■■□□□ 1.38
RNF40-210ENST00000566811 UPF3BQ9BZI7 483 aaKnown RBP23.65■■□□□ 1.38
RNF40-210ENST00000566811 R3HDMLQ9H3Y0 253 aa23.65■■□□□ 1.38
RNF40-210ENST00000566811 PDRG1Q9NUG6 133 aa23.65■■□□□ 1.38
RNF40-210ENST00000566811 RBM28Q9NW13 759 aaKnown RBP23.65■■□□□ 1.38
RNF40-210ENST00000566811 RBPJLQ9UBG7 517 aa23.65■■□□□ 1.38
RNF40-210ENST00000566811 HPS5Q9UPZ3 1129 aa23.65■■□□□ 1.38
RNF40-210ENST00000566811 PLXNB2O15031 1838 aa23.64■■□□□ 1.38
RNF40-210ENST00000566811 ZBTB43O43298 467 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 SLC25A27O95847 323 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 SMARCA1P28370 1054 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 SHCBP1Q8NEM2 672 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 BRF1Q92994 677 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 TCEANC2Q96MN5 208 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 TBC1D32Q96NH3 1257 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 TEX13BQ9BXU2 312 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 SENP2Q9HC62 589 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 MAD2L2Q9UI95 211 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 PRR12Q9ULL5 1215 aa23.64■■□□□ 1.37
RNF40-210ENST00000566811 RBBP6Q7Z6E9 1792 aaKnown RBP23.64■■□□□ 1.37
RNF40-210ENST00000566811 CCDC196A0A1B0GTZ2 297 aa23.63■■□□□ 1.37
RNF40-210ENST00000566811 CPA1P15085 419 aa23.63■■□□□ 1.37
RNF40-210ENST00000566811 MAPK4P31152 587 aa23.63■■□□□ 1.37
RNF40-210ENST00000566811 RASGRP2Q7LDG7 609 aa23.63■■□□□ 1.37
RNF40-210ENST00000566811 NUP133Q8WUM0 1156 aa23.63■■□□□ 1.37
RNF40-210ENST00000566811 SPATC1LQ9H0A9 340 aa23.63■■□□□ 1.37
RNF40-210ENST00000566811 RANBP17Q9H2T7 1088 aaKnown RBP23.63■■□□□ 1.37
RNF40-210ENST00000566811 TXNRD2Q9NNW7 524 aa23.63■■□□□ 1.37
RNF40-210ENST00000566811 GPCPD1Q9NPB8 672 aa23.63■■□□□ 1.37
RNF40-210ENST00000566811 GPHNQ9NQX3 736 aaPredicted RBP23.63■■□□□ 1.37
RNF40-210ENST00000566811 KLF18A0A0U1RQI7 1052 aa23.62■■□□□ 1.37
RNF40-210ENST00000566811 KLRF2D3W0D1 207 aa23.62■■□□□ 1.37
RNF40-210ENST00000566811 FCGRTP55899 365 aa23.62■■□□□ 1.37
RNF40-210ENST00000566811 MICU3Q86XE3 530 aa23.62■■□□□ 1.37
RNF40-210ENST00000566811 CCAR1Q8IX12 1150 aaKnown RBP23.62■■□□□ 1.37
RNF40-210ENST00000566811 REPS2Q8NFH8 660 aa23.62■■□□□ 1.37
RNF40-210ENST00000566811 ZNF214Q9UL59 606 aaPredicted RBP23.62■■□□□ 1.37
RNF40-210ENST00000566811 CNMDO75829 334 aa23.61■■□□□ 1.37
RNF40-210ENST00000566811 TRAF1Q13077 416 aa23.61■■□□□ 1.37
RNF40-210ENST00000566811 TMEM132BQ14DG7 1078 aa23.61■■□□□ 1.37
RNF40-210ENST00000566811 RABEP1Q15276 862 aa23.61■■□□□ 1.37
RNF40-210ENST00000566811 FANCBQ8NB91 859 aa23.61■■□□□ 1.37
RNF40-210ENST00000566811 SPZ1Q9BXG8 430 aa23.61■■□□□ 1.37
RNF40-210ENST00000566811 MROH8Q9H579 483 aa23.61■■□□□ 1.37
RNF40-210ENST00000566811 BTBD7Q9P203 1132 aa23.61■■□□□ 1.37
RNF40-210ENST00000566811 GOLGA8BA8MQT2 603 aa23.6■■□□□ 1.37
RNF40-210ENST00000566811 GOLGA8HP0CJ92 632 aa23.6■■□□□ 1.37
RNF40-210ENST00000566811 PRMT2P55345 433 aa23.6■■□□□ 1.37
RNF40-210ENST00000566811 TOB2Q14106 344 aaPredicted RBP23.6■■□□□ 1.37
RNF40-210ENST00000566811 TKFCQ3LXA3 575 aa23.6■■□□□ 1.37
RNF40-210ENST00000566811 SAMD1Q6SPF0 538 aaPredicted RBP23.6■■□□□ 1.37
RNF40-210ENST00000566811 RIOX2Q8IUF8 465 aa23.6■■□□□ 1.37
RNF40-210ENST00000566811 ZNF274Q96GC6 653 aaPredicted RBP23.6■■□□□ 1.37
RNF40-210ENST00000566811 ICAM1P05362 532 aa23.59■■□□□ 1.37
RNF40-210ENST00000566811 HOXD10P28358 340 aa23.59■■□□□ 1.37
RNF40-210ENST00000566811 STAT3P40763 770 aa23.59■■□□□ 1.37
RNF40-210ENST00000566811 METAP2P50579 478 aaKnown RBP eCLIP23.59■■□□□ 1.37
RNF40-210ENST00000566811 NEK4P51957 841 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms