RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-211	ENST00000566550	PTPN11	Q06124	597 aa	Predicted RBP	4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	RAPGEF1	Q13905	1077 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	LRRC14	Q15048	493 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	PKN1	Q16512	942 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	CPSF6	Q16630	551 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	GNPTAB	Q3T906	1256 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	FNDC3B	Q53EP0	1204 aa	Known RBP	4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	FBLN7	Q53RD9	439 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	FAM102B	Q5T8I3	360 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	ANO1	Q5XXA6	986 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	ANKRD34A	Q69YU3	496 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	OVOS1	Q6IE37	1185 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	UNC5A	Q6ZN44	842 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	NECAB2	Q7Z6G3	386 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	VSIG10L	Q86VR7	867 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	PPM1K	Q8N3J5	372 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	MAGEB6	Q8N7X4	407 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	CNTD1	Q8N815	330 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	KLHL23	Q8NBE8	558 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	SVIP	Q8NHG7	77 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	STK35	Q8TDR2	534 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	JPH3	Q8WXH2	748 aa	Predicted RBP	4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	PLCD4	Q9BRC7	762 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	DHRS4	Q9BTZ2	278 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	OSBPL1A	Q9BXW6	950 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	EHMT1	Q9H9B1	1298 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	FBRS	Q9HAH7	460 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	KLHL3	Q9UH77	587 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	NDOR1	Q9UHB4	597 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	FBXO9	Q9UK97	447 aa	Predicted RBP	4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	FAM50B	Q9Y247	325 aa		4.22	□□□□□ -1.73
HERPUD1-211	ENST00000566550	LTBP3	Q9NS15	1303 aa		4.21	□□□□□ -1.73
HERPUD1-211	ENST00000566550	CCDC163	A0A0D9SF12	145 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	E2F8	A0AVK6	867 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	DBX1	A6NMT0	343 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	LINC01387	J3KSC0	135 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	PDE2A	O00408	941 aa	Predicted RBP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	GPR39	O43194	453 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	OPA1	O60313	960 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	SMNDC1	O75940	238 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	HTR3B	O95264	441 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	EYA4	O95677	639 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	F2	P00734	622 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	BMP6	P22004	513 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	POU5F1B	Q06416	359 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	PICALM	Q13492	652 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	LONRF2	Q1L5Z9	754 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	ABCB5	Q2M3G0	1257 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	LRRFIP1	Q32MZ4	808 aa	Known RBP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	RNF219	Q5W0B1	726 aa	Predicted RBP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	MAP1S	Q66K74	1059 aa	Predicted RBP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	MPRIP	Q6WCQ1	1025 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	DGKH	Q86XP1	1220 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	SPATS2	Q86XZ4	545 aa	Known RBP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	TPH2	Q8IWU9	490 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	TCEAL8	Q8IYN2	117 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	AGBL5	Q8NDL9	886 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	MYRIP	Q8NFW9	859 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	USP7	Q93009	1102 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	ACSBG1	Q96GR2	724 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	TRIM8	Q9BZR9	551 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	PHAX	Q9H814	394 aa	Known RBP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	LUC7L	Q9NQ29	371 aa	Known RBP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	ARHGEF4	Q9NR80	690 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	CYP8B1	Q9UNU6	501 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	TRIM33	Q9UPN9	1127 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	LUC7L2	Q9Y383	392 aa	Known RBP	4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	CORIN	Q9Y5Q5	1042 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	SLC12A7	Q9Y666	1083 aa		4.21	□□□□□ -1.74
HERPUD1-211	ENST00000566550	BIN1	O00499	593 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	TBX3	O15119	743 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	GAS2	O43903	313 aa	Known RBP	4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	DNAJC8	O75937	253 aa	Predicted RBP	4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	ACR	P10323	421 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	BDNF	P23560	247 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	ID4	P47928	161 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	TRAPPC10	P48553	1259 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	ATP11A	P98196	1134 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	SLC7A5	Q01650	507 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	PCDH1	Q08174	1060 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	MLEC	Q14165	292 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	MAP7	Q14244	749 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	ZNF460	Q14592	562 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	SEPT7	Q16181	437 aa	Known RBP	4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	PTPN21	Q16825	1174 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	INO80D	Q53TQ3	878 aa	Predicted RBP	4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	NXN	Q6DKJ4	435 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	BRAP	Q7Z569	592 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	SPICE1	Q8N0Z3	855 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	AHI1	Q8N157	1196 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	KLHL6	Q8WZ60	621 aa		4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	DDX1	Q92499	740 aa	Known RBP	4.2	□□□□□ -1.74
HERPUD1-211	ENST00000566550	KISS1R	Q969F8	398 aa	Predicted RBP	4.2	□□□□□ -1.74

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