RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 RICTORQ6R327 1708 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 MROH1Q8NDA8 1641 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 CYP2D7A0A087X1C5 515 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 GSTTP1A0A1W2PQM5 241 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 TRIM49BA6NDI0 452 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 TCP1P17987 556 aaKnown RBP11.71□□□□□ -0.53
USB1-212ENST00000566082 ARID4AP29374 1257 aaPredicted RBP11.71□□□□□ -0.53
USB1-212ENST00000566082 GGCXP38435 758 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 ARHGAP25P42331 645 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 FOXO4P98177 505 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 TRMT1LQ7Z2T5 733 aaKnown RBP11.71□□□□□ -0.53
USB1-212ENST00000566082 LY9Q9HBG7 655 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 SLC39A2Q9NP94 309 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 GOLGA8KD6RF30 607 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 GCOM1H8Y6P7 765 aaPredicted RBP11.71□□□□□ -0.54
USB1-212ENST00000566082 CYP27B1O15528 508 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 MYZAPP0CAP1 466 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 SCG2P13521 617 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 SSR1P43307 286 aaKnown RBP11.71□□□□□ -0.54
USB1-212ENST00000566082 CUL4BQ13620 913 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 TCP11X2Q5H9J9 407 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 ILDR1Q86SU0 546 aaPredicted RBP11.71□□□□□ -0.54
USB1-212ENST00000566082 CCDC84Q86UT8 332 aaPredicted RBP11.71□□□□□ -0.54
USB1-212ENST00000566082 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 ZSCAN29Q8IWY8 852 aaPredicted RBP11.71□□□□□ -0.54
USB1-212ENST00000566082 NOA1Q8NC60 698 aaKnown RBP11.71□□□□□ -0.54
USB1-212ENST00000566082 ACSBG1Q96GR2 724 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 CNOT6LQ96LI5 555 aaKnown RBP11.71□□□□□ -0.54
USB1-212ENST00000566082 CHP1Q99653 195 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 ADGRL3Q9HAR2 1447 aa11.71□□□□□ -0.54
USB1-212ENST00000566082 PALLDQ8WX93 1383 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 SASH3O75995 380 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 GNA11P29992 359 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 GYG1P46976 350 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 TRIM65Q6PJ69 517 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 BLIDQ8IZY5 108 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 LRRC27Q9C0I9 530 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 NPHP4O75161 1426 aaPredicted RBP11.7□□□□□ -0.54
USB1-212ENST00000566082 KIF20BQ96Q89 1820 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
USB1-212ENST00000566082 DCAF17Q5H9S7 520 aaPredicted RBP11.7□□□□□ -0.54
USB1-212ENST00000566082 NELFCDQ8IXH7 590 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 CTNNBL1Q8WYA6 563 aaPredicted RBP11.7□□□□□ -0.54
USB1-212ENST00000566082 ATG3Q9NT62 314 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 TRIM10Q9UDY6 481 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 RWDD2AQ9UIY3 292 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 SOS2Q07890 1332 aaPredicted RBP11.7□□□□□ -0.54
USB1-212ENST00000566082 MROH5Q6ZUA9 1318 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 CEMIPQ8WUJ3 1361 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 HGSO14964 777 aaPredicted RBP11.7□□□□□ -0.54
USB1-212ENST00000566082 TFAP4Q01664 338 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 RASSF7Q02833 373 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 PDIA6Q15084 440 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 ZNF658Q5TYW1 1059 aaPredicted RBP11.7□□□□□ -0.54
USB1-212ENST00000566082 PNKPQ96T60 521 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 MYCBPQ99417 103 aaPredicted RBP11.7□□□□□ -0.54
USB1-212ENST00000566082 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.7□□□□□ -0.54
USB1-212ENST00000566082 FBXO2Q9UK22 296 aaPredicted RBP11.7□□□□□ -0.54
USB1-212ENST00000566082 ANKARQ7Z5J8 1434 aa11.7□□□□□ -0.54
USB1-212ENST00000566082 GOLGA6L10A0A0M3HER8 536 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 TTC26A0AVF1 554 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 A6NNZ2 444 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 H3BQF6 201 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 MOCS3O95396 460 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 PLEKHA8P1O95397 391 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 PDCLQ13371 301 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 NAA25Q14CX7 972 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 TUBB8Q3ZCM7 444 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 TADA2BQ86TJ2 420 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 NHEJ1Q9H9Q4 299 aaPredicted RBP11.69□□□□□ -0.54
USB1-212ENST00000566082 DIP2CQ9Y2E4 1556 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 ATP6V1AP38606 617 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 TECP42680 631 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 KLHL30Q0D2K2 578 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 NR1I3Q14994 352 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 ANKS4BQ8N8V4 417 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 RRP36Q96EU6 259 aaKnown RBP11.69□□□□□ -0.54
USB1-212ENST00000566082 ATP1A1P05023 1023 aaKnown RBP11.69□□□□□ -0.54
USB1-212ENST00000566082 EEF1GP26641 437 aaKnown RBP11.69□□□□□ -0.54
USB1-212ENST00000566082 IFT88Q13099 833 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 KRT71Q3SY84 523 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 CCDC25Q86WR0 208 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 CCDC155Q8N6L0 562 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 EPB41L5Q9HCM4 733 aa11.69□□□□□ -0.54
USB1-212ENST00000566082 SAP30BPQ9UHR5 308 aaKnown RBP11.69□□□□□ -0.54
USB1-212ENST00000566082 TFRCP02786 760 aaKnown RBP11.68□□□□□ -0.54
USB1-212ENST00000566082 PPP1R2P41236 205 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 EHHADHQ08426 723 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 PNMA8AQ86V59 439 aaPredicted RBP11.68□□□□□ -0.54
USB1-212ENST00000566082 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.68□□□□□ -0.54
USB1-212ENST00000566082 TAOK3Q9H2K8 898 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 POLD4Q9HCU8 107 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 TFCP2L1Q9NZI6 479 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
USB1-212ENST00000566082 FAM169AQ9Y6X4 670 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms