RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SLC4A3P48751 1232 aa18.67■□□□□ 0.58
RAB40C-208ENST00000564703 ASPRV1Q53RT3 343 aa18.67■□□□□ 0.58
RAB40C-208ENST00000564703 CPXCR1Q8N123 301 aa18.67■□□□□ 0.58
RAB40C-208ENST00000564703 SPATC1LQ9H0A9 340 aa18.67■□□□□ 0.58
RAB40C-208ENST00000564703 WDR19Q8NEZ3 1342 aa18.67■□□□□ 0.58
RAB40C-208ENST00000564703 GOLGA8HP0CJ92 632 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 SNHG28P0DPA3 235 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 COPB2P35606 906 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 SLC16A2P36021 539 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 LIFRP42702 1097 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 EXOSC10Q01780 885 aaKnown RBP18.66■□□□□ 0.58
RAB40C-208ENST00000564703 TMEM132BQ14DG7 1078 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 TTBK2Q6IQ55 1244 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 POTEEQ6S8J3 1075 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 PLEKHH3Q7Z736 793 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 NCAPG2Q86XI2 1143 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 TNS4Q8IZW8 715 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 NUP133Q8WUM0 1156 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 MROH8Q9H579 483 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 SRRDQ9UH36 339 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 PRR12Q9ULL5 1215 aa18.66■□□□□ 0.58
RAB40C-208ENST00000564703 DHX16O60231 1041 aaKnown RBP18.65■□□□□ 0.58
RAB40C-208ENST00000564703 CALM1P0DP23 149 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 CALM2P0DP24 149 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 CALM3P0DP25 149 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 CASTP20810 708 aaKnown RBP18.65■□□□□ 0.58
RAB40C-208ENST00000564703 SYDE2Q5VT97 1194 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 FBXO46Q6PJ61 603 aaPredicted RBP18.65■□□□□ 0.58
RAB40C-208ENST00000564703 BTNL9Q6UXG8 535 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 SHCBP1Q8NEM2 672 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 RAET1EQ8TD07 263 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 MOV10L1Q9BXT6 1211 aaKnown RBP18.65■□□□□ 0.58
RAB40C-208ENST00000564703 LRRC2Q9BYS8 371 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 MCOLN1Q9GZU1 580 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 LY9Q9HBG7 655 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 SLC38A10Q9HBR0 1119 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 SLC12A7Q9Y666 1083 aa18.65■□□□□ 0.58
RAB40C-208ENST00000564703 SH2B2O14492 632 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-208ENST00000564703 STRNO43815 780 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 ERCC3P19447 782 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 CTGFP29279 349 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 KIF5BP33176 963 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 OAZ1P54368 228 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 GPR142Q7Z601 462 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 CTCFLQ8NI51 663 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-208ENST00000564703 NUDT12Q9BQG2 462 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 TEX13BQ9BXU2 312 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 UBA5Q9GZZ9 404 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 PORCNQ9H237 461 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 RAVER2Q9HCJ3 691 aaKnown RBP18.64■□□□□ 0.57
RAB40C-208ENST00000564703 PNMA2Q9UL42 364 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 CYP46A1Q9Y6A2 500 aa18.64■□□□□ 0.57
RAB40C-208ENST00000564703 KLRF2D3W0D1 207 aa18.63■□□□□ 0.57
RAB40C-208ENST00000564703 ATP2A1O14983 1001 aa18.63■□□□□ 0.57
RAB40C-208ENST00000564703 C8orf34Q49A92 452 aa18.63■□□□□ 0.57
RAB40C-208ENST00000564703 SNRNP48Q6IEG0 339 aaKnown RBP18.63■□□□□ 0.57
RAB40C-208ENST00000564703 RASGRP2Q7LDG7 609 aa18.63■□□□□ 0.57
RAB40C-208ENST00000564703 RIOX2Q8IUF8 465 aa18.63■□□□□ 0.57
RAB40C-208ENST00000564703 ZNF654Q8IZM8 581 aa18.63■□□□□ 0.57
RAB40C-208ENST00000564703 TCEANC2Q96MN5 208 aa18.63■□□□□ 0.57
RAB40C-208ENST00000564703 UPF2Q9HAU5 1272 aaKnown RBP18.63■□□□□ 0.57
RAB40C-208ENST00000564703 SENP2Q9HC62 589 aa18.63■□□□□ 0.57
RAB40C-208ENST00000564703 VAT1LQ9HCJ6 419 aa18.63■□□□□ 0.57
RAB40C-208ENST00000564703 GPHNQ9NQX3 736 aaPredicted RBP18.63■□□□□ 0.57
RAB40C-208ENST00000564703 RLFQ13129 1914 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 DDAH1O94760 285 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 SEC24BO95487 1268 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 RPS6KB1P23443 525 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 FLT3LGP49771 235 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 GNAQP50148 359 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 ANAPC15P60006 121 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 GRM4Q14833 912 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 CCDC174Q6PII3 467 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 RUFY3Q7L099 469 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 NBPF11Q86T75 865 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 REPS2Q8NFH8 660 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 MAP3K14Q99558 947 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 TM6SF1Q9BZW5 370 aa18.62■□□□□ 0.57
RAB40C-208ENST00000564703 ZNF214Q9UL59 606 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-208ENST00000564703 NAP1L2Q9ULW6 460 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-208ENST00000564703 MGAMO43451 1857 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 SLC15A5A6NIM6 579 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 FCER1AP12319 257 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 CPA1P15085 419 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 SNAP25P60880 206 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 CAP1Q01518 475 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 PRKCZQ05513 592 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 TROAPQ12815 778 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 Q6ZUG5 572 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 SGMS1Q86VZ5 419 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 SOCS4Q8WXH5 440 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 ZSWIM6Q9HCJ5 1215 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 SLC5A4Q9NY91 659 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 FBXO40Q9UH90 709 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 GABRQQ9UN88 632 aa18.61■□□□□ 0.57
RAB40C-208ENST00000564703 PALM3A6NDB9 673 aaPredicted RBP18.6■□□□□ 0.57
RAB40C-208ENST00000564703 PTPREP23469 700 aa18.6■□□□□ 0.57
RAB40C-208ENST00000564703 COL9A3Q14050 684 aaPredicted RBP18.6■□□□□ 0.57
RAB40C-208ENST00000564703 KCTD2Q14681 263 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms