RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CPLX1O14810 134 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 LARGE1O95461 756 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 RXRAP19793 462 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 OSBPP22059 807 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 CTGFP29279 349 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 HOXA7P31268 230 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-208ENST00000564247 PSMC4P43686 418 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 PRMT2P55345 433 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 RTN1Q16799 776 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 USP17L2Q6R6M4 530 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 RAB11FIP4Q86YS3 637 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 CCDC83Q8IWF9 413 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 CCDC144CPQ8IYA2 1237 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 ACER1Q8TDN7 264 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 GTF3C6Q969F1 213 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 TRIM47Q96LD4 638 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 MYL10Q9BUA6 226 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 ASCC2Q9H1I8 757 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-208ENST00000564247 EMILIN3Q9NT22 766 aa19.72■□□□□ 0.75
CMTM3-208ENST00000564247 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-208ENST00000564247 F5H6K3 240 aa19.71■□□□□ 0.75
CMTM3-208ENST00000564247 PARP1P09874 1014 aaKnown RBP19.71■□□□□ 0.75
CMTM3-208ENST00000564247 GCLCP48506 637 aaPredicted RBP19.71■□□□□ 0.75
CMTM3-208ENST00000564247 GNAQP50148 359 aa19.71■□□□□ 0.75
CMTM3-208ENST00000564247 USP14P54578 494 aa19.71■□□□□ 0.75
CMTM3-208ENST00000564247 KLRC3Q07444 240 aa19.71■□□□□ 0.75
CMTM3-208ENST00000564247 SCRN1Q12765 414 aa19.71■□□□□ 0.75
CMTM3-208ENST00000564247 CUL4AQ13619 759 aa19.71■□□□□ 0.75
CMTM3-208ENST00000564247 SLFN13Q68D06 897 aa19.71■□□□□ 0.75
CMTM3-208ENST00000564247 GMCL1P1Q8NEA9 526 aa19.71■□□□□ 0.75
CMTM3-208ENST00000564247 C12orf42Q96LP6 360 aa19.71■□□□□ 0.75
CMTM3-208ENST00000564247 A0A1W2PRG0 241 aa19.7■□□□□ 0.74
CMTM3-208ENST00000564247 GRM4Q14833 912 aa19.7■□□□□ 0.74
CMTM3-208ENST00000564247 DCAF4Q8WV16 495 aa19.7■□□□□ 0.74
CMTM3-208ENST00000564247 ARMC5Q96C12 935 aa19.7■□□□□ 0.74
CMTM3-208ENST00000564247 INTS4Q96HW7 963 aaKnown RBP19.7■□□□□ 0.74
CMTM3-208ENST00000564247 KIAA1683Q9H0B3 1180 aa19.7■□□□□ 0.74
CMTM3-208ENST00000564247 PTCH2Q9Y6C5 1203 aa19.7■□□□□ 0.74
CMTM3-208ENST00000564247 CDKL5O76039 1030 aa19.69■□□□□ 0.74
CMTM3-208ENST00000564247 FMNL1O95466 1100 aaPredicted RBP19.69■□□□□ 0.74
CMTM3-208ENST00000564247 HOXD10P28358 340 aa19.69■□□□□ 0.74
CMTM3-208ENST00000564247 ADD1P35611 737 aaKnown RBP19.69■□□□□ 0.74
CMTM3-208ENST00000564247 SLC4A3P48751 1232 aa19.69■□□□□ 0.74
CMTM3-208ENST00000564247 FCGRTP55899 365 aa19.69■□□□□ 0.74
CMTM3-208ENST00000564247 FAM110CQ1W6H9 321 aa19.69■□□□□ 0.74
CMTM3-208ENST00000564247 ASPRV1Q53RT3 343 aa19.69■□□□□ 0.74
CMTM3-208ENST00000564247 ANKRD13CQ8N6S4 541 aa19.69■□□□□ 0.74
CMTM3-208ENST00000564247 LZTS2Q9BRK4 669 aa19.69■□□□□ 0.74
CMTM3-208ENST00000564247 LLPHQ9BRT6 129 aaKnown RBP19.69■□□□□ 0.74
CMTM3-208ENST00000564247 VCPKMTQ9H867 229 aa19.69■□□□□ 0.74
CMTM3-208ENST00000564247 NCOA5Q9HCD5 579 aaKnown RBP19.69■□□□□ 0.74
CMTM3-208ENST00000564247 SRRDQ9UH36 339 aa19.69■□□□□ 0.74
CMTM3-208ENST00000564247 ISY1Q9ULR0 285 aaKnown RBP19.69■□□□□ 0.74
CMTM3-208ENST00000564247 PDHBP11177 359 aa19.68■□□□□ 0.74
CMTM3-208ENST00000564247 SLC1A4P43007 532 aa19.68■□□□□ 0.74
CMTM3-208ENST00000564247 SOX10P56693 466 aa19.68■□□□□ 0.74
CMTM3-208ENST00000564247 IRX3P78415 501 aaPredicted RBP19.68■□□□□ 0.74
CMTM3-208ENST00000564247 CCDC96Q2M329 555 aa19.68■□□□□ 0.74
CMTM3-208ENST00000564247 GPATCH4Q5T3I0 446 aaKnown RBP19.68■□□□□ 0.74
CMTM3-208ENST00000564247 SPRYD3Q8NCJ5 442 aa19.68■□□□□ 0.74
CMTM3-208ENST00000564247 NID2Q14112 1375 aa19.68■□□□□ 0.74
CMTM3-208ENST00000564247 ECM2O94769 699 aaPredicted RBP19.67■□□□□ 0.74
CMTM3-208ENST00000564247 NDUFB10O96000 172 aa19.67■□□□□ 0.74
CMTM3-208ENST00000564247 SNHG28P0DPA3 235 aa19.67■□□□□ 0.74
CMTM3-208ENST00000564247 BMP3P12645 472 aa19.67■□□□□ 0.74
CMTM3-208ENST00000564247 CDC27P30260 824 aa19.67■□□□□ 0.74
CMTM3-208ENST00000564247 ZYXQ15942 572 aaKnown RBP19.67■□□□□ 0.74
CMTM3-208ENST00000564247 LPAR1Q92633 364 aa19.67■□□□□ 0.74
CMTM3-208ENST00000564247 GMCL1Q96IK5 515 aa19.67■□□□□ 0.74
CMTM3-208ENST00000564247 P2RX7Q99572 595 aaKnown RBP19.67■□□□□ 0.74
CMTM3-208ENST00000564247 SMC3Q9UQE7 1217 aa19.67■□□□□ 0.74
CMTM3-208ENST00000564247 BRCA2P51587 3418 aa19.67■□□□□ 0.74
CMTM3-208ENST00000564247 PALM3A6NDB9 673 aaPredicted RBP19.66■□□□□ 0.74
CMTM3-208ENST00000564247 KLRF2D3W0D1 207 aa19.66■□□□□ 0.74
CMTM3-208ENST00000564247 AKAP17AQ02040 695 aaKnown RBP19.66■□□□□ 0.74
CMTM3-208ENST00000564247 ZNF543Q08ER8 600 aa19.66■□□□□ 0.74
CMTM3-208ENST00000564247 SLC9C1Q4G0N8 1177 aa19.66■□□□□ 0.74
CMTM3-208ENST00000564247 NBPF11Q86T75 865 aa19.66■□□□□ 0.74
CMTM3-208ENST00000564247 GPCPD1Q9NPB8 672 aa19.66■□□□□ 0.74
CMTM3-208ENST00000564247 FAM217BQ9NTX9 383 aaPredicted RBP19.66■□□□□ 0.74
CMTM3-208ENST00000564247 FOXD4L1Q9NU39 408 aa19.66■□□□□ 0.74
CMTM3-208ENST00000564247 MORF4L1Q9UBU8 362 aa19.66■□□□□ 0.74
CMTM3-208ENST00000564247 MAD2L2Q9UI95 211 aa19.66■□□□□ 0.74
CMTM3-208ENST00000564247 DOCK3Q8IZD9 2030 aa19.66■□□□□ 0.74
CMTM3-208ENST00000564247 RBBP6Q7Z6E9 1792 aaKnown RBP19.65■□□□□ 0.74
CMTM3-208ENST00000564247 USP17L15C9J2P7 530 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 USP17L13C9JLJ4 530 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 USP17L11C9JVI0 530 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 USP17L18D6R9N7 530 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 USP17L22D6RA61 530 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 USP17L17D6RBQ6 530 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 USP17L19D6RCP7 530 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 USP17L20D6RJB6 530 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 GOLGA8HP0CJ92 632 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 IFNAR1P17181 557 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 SMARCA1P28370 1054 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 HERVK_113P62684 666 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 SSRP1Q08945 709 aaKnown RBP19.65■□□□□ 0.74
CMTM3-208ENST00000564247 USP17L24Q0WX57 530 aa19.65■□□□□ 0.74
CMTM3-208ENST00000564247 TRIM22Q8IYM9 498 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms