RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 MAPKAPK5Q8IW41 473 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 CNBD1Q8NA66 436 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 DAGLBQ8NCG7 672 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 SAP30BPQ9UHR5 308 aaKnown RBP22.61■■□□□ 1.21
MSLN-205ENST00000563941 MTMR7Q9Y216 660 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 CDK5RAP2Q96SN8 1893 aa22.61■■□□□ 1.21
MSLN-205ENST00000563941 MFAP3LO75121 409 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 CCDC175P0C221 793 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 CCT6AP40227 531 aaKnown RBP22.6■■□□□ 1.21
MSLN-205ENST00000563941 DMTNQ08495 405 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 TRAPPC3LQ5T215 181 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 HEATR3Q7Z4Q2 680 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 TMEM47Q9BQJ4 181 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 CARD6Q9BX69 1037 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 LIMA1Q9UHB6 759 aaKnown RBP22.6■■□□□ 1.21
MSLN-205ENST00000563941 STX8Q9UNK0 236 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 ITIH6Q6UXX5 1313 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 TADA3O75528 432 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 RASA1P20936 1047 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 KRT31Q15323 416 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 NELFBQ8WX92 580 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 UBXN4Q92575 508 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 RTFDC1Q9BY42 306 aaPredicted RBP22.6■■□□□ 1.21
MSLN-205ENST00000563941 MRPL44Q9H9J2 332 aaKnown RBP22.6■■□□□ 1.21
MSLN-205ENST00000563941 DISC1Q9NRI5 854 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 BARHL2Q9NY43 387 aa22.6■■□□□ 1.21
MSLN-205ENST00000563941 THSD7AQ9UPZ6 1657 aa22.59■■□□□ 1.21
MSLN-205ENST00000563941 STXBP3O00186 592 aa22.59■■□□□ 1.21
MSLN-205ENST00000563941 GALNT17Q6IS24 598 aa22.59■■□□□ 1.21
MSLN-205ENST00000563941 RAD9BQ6WBX8 426 aa22.59■■□□□ 1.21
MSLN-205ENST00000563941 DTHD1Q6ZMT9 781 aa22.59■■□□□ 1.21
MSLN-205ENST00000563941 C15orf52Q6ZUT6 534 aaKnown RBP22.59■■□□□ 1.21
MSLN-205ENST00000563941 ZNF446Q9NWS9 450 aa22.59■■□□□ 1.21
MSLN-205ENST00000563941 PALM3A6NDB9 673 aaPredicted RBP22.58■■□□□ 1.21
MSLN-205ENST00000563941 CASP14P31944 242 aa22.58■■□□□ 1.21
MSLN-205ENST00000563941 INF2Q27J81 1249 aa22.58■■□□□ 1.21
MSLN-205ENST00000563941 KIFC2Q96AC6 838 aa22.58■■□□□ 1.21
MSLN-205ENST00000563941 TMEM60Q9H2L4 133 aa22.58■■□□□ 1.21
MSLN-205ENST00000563941 GDAQ9Y2T3 454 aa22.58■■□□□ 1.21
MSLN-205ENST00000563941 GYPCP04921 128 aa22.58■■□□□ 1.2
MSLN-205ENST00000563941 SPAG1Q07617 926 aa22.58■■□□□ 1.2
MSLN-205ENST00000563941 CNGA4Q8IV77 575 aa22.58■■□□□ 1.2
MSLN-205ENST00000563941 LRRC10BA6NIK2 292 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 EFCAB8A8MWE9 144 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 N4BP3O15049 544 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 BTDP43251 543 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 MAP3K9P80192 1104 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 GPSM2P81274 684 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 UTP14CQ5TAP6 766 aaKnown RBP22.57■■□□□ 1.2
MSLN-205ENST00000563941 ADGRG1Q9Y653 693 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 PP2D1A8MPX8 630 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 GOLGA8HP0CJ92 632 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 FXR1P51114 621 aaKnown RBP eCLIP22.57■■□□□ 1.2
MSLN-205ENST00000563941 COPB1P53618 953 aaKnown RBP22.57■■□□□ 1.2
MSLN-205ENST00000563941 NAALADL2Q58DX5 795 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 KRT222Q8N1A0 295 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 CCDC51Q96ER9 411 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 LZTS2Q9BRK4 669 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 ZNF287Q9HBT7 754 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 FAM53CQ9NYF3 392 aa22.57■■□□□ 1.2
MSLN-205ENST00000563941 DDX60LQ5H9U9 1706 aaKnown RBP22.56■■□□□ 1.2
MSLN-205ENST00000563941 SNED1Q8TER0 1413 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 MYH8P13535 1937 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 TPM1P09493 284 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 PRCPP42785 496 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 CLCN6P51797 869 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 TCP11X2Q5H9J9 407 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 FAM196AQ6ZSG2 479 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 ANKRD20A12PQ8NF67 263 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 RASSF8Q8NHQ8 419 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 RPGRQ92834 1020 aaKnown RBP22.56■■□□□ 1.2
MSLN-205ENST00000563941 GTPBP4Q9BZE4 634 aaKnown RBP22.56■■□□□ 1.2
MSLN-205ENST00000563941 VPS16Q9H269 839 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 TAB2Q9NYJ8 693 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 MAPK8IP1Q9UQF2 711 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 MRFAP1Q9Y605 127 aa22.56■■□□□ 1.2
MSLN-205ENST00000563941 KCNJ18B7U540 433 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 KLRF2D3W0D1 207 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 KCNJ12Q14500 433 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 PRR5LQ6MZQ0 368 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 CERS3Q8IU89 383 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 CD209Q9NNX6 404 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 MYH1P12882 1939 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 UFL1O94874 794 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 CDK8P49336 464 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 RASGRP2Q7LDG7 609 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 EYA3Q99504 573 aa22.55■■□□□ 1.2
MSLN-205ENST00000563941 LAD1O00515 517 aa22.54■■□□□ 1.2
MSLN-205ENST00000563941 FECHP22830 423 aa22.54■■□□□ 1.2
MSLN-205ENST00000563941 UBA7P41226 1012 aa22.54■■□□□ 1.2
MSLN-205ENST00000563941 C16orf86Q6ZW13 317 aa22.54■■□□□ 1.2
MSLN-205ENST00000563941 TEX11Q8IYF3 940 aa22.54■■□□□ 1.2
MSLN-205ENST00000563941 SPZ1Q9BXG8 430 aa22.54■■□□□ 1.2
MSLN-205ENST00000563941 LZTFL1Q9NQ48 299 aa22.54■■□□□ 1.2
MSLN-205ENST00000563941 PRDM4Q9UKN5 801 aa22.54■■□□□ 1.2
MSLN-205ENST00000563941 GPR75-ASB3A0A0A6YYF3 556 aa22.54■■□□□ 1.2
MSLN-205ENST00000563941 PPP2R3AQ06190 1150 aa22.54■■□□□ 1.2
MSLN-205ENST00000563941 CCDC12Q8WUD4 166 aaPredicted RBP22.54■■□□□ 1.2
MSLN-205ENST00000563941 IRX2Q9BZI1 471 aaPredicted RBP22.54■■□□□ 1.2
MSLN-205ENST00000563941 CCSER1Q9C0I3 900 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms