RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 MAML3Q96JK9 1138 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 METTL22Q9BUU2 404 aaPredicted RBP13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 PLA2G12BQ9BX93 195 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 IDI2Q9BXS1 227 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 USP40Q9NVE5 1235 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 ANGPTL2Q9UKU9 493 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 IQSEC3Q9UPP2 1182 aaPredicted RBP13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 NUDCQ9Y266 331 aa13.64□□□□□ -0.23
HDGFL3-204ENST00000563790 ASGR1P07306 291 aa13.63□□□□□ -0.23
HDGFL3-204ENST00000563790 DLX2Q07687 328 aaPredicted RBP13.63□□□□□ -0.23
HDGFL3-204ENST00000563790 UBE4AQ14139 1066 aa13.63□□□□□ -0.23
HDGFL3-204ENST00000563790 KRT24Q2M2I5 525 aa13.63□□□□□ -0.23
HDGFL3-204ENST00000563790 PCSK9Q8NBP7 692 aaKnown RBP13.63□□□□□ -0.23
HDGFL3-204ENST00000563790 CDV3Q9UKY7 258 aaKnown RBP13.63□□□□□ -0.23
HDGFL3-204ENST00000563790 CFAP46Q8IYW2 2715 aa13.63□□□□□ -0.23
HDGFL3-204ENST00000563790 LINC01553A4QN01 128 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 MYADML2A6NDP7 307 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 TAF4O00268 1085 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 CAP2P40123 477 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 LBX2Q6XYB7 198 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 PRR23BQ6ZRT6 265 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 DEFB128Q7Z7B8 93 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 SLC43A3Q8NBI5 491 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 NSUN3Q9H649 340 aaKnown RBP13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 BTBD7Q9P203 1132 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 ZMIZ1Q9ULJ6 1067 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 RALGAPA1Q6GYQ0 2036 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 SIPA1L1O43166 1804 aa13.62□□□□□ -0.23
HDGFL3-204ENST00000563790 ADAMTS20P59510 1910 aa13.61□□□□□ -0.23
HDGFL3-204ENST00000563790 ANKRD18BA2A2Z9 1011 aa13.61□□□□□ -0.23
HDGFL3-204ENST00000563790 ZNF865P0CJ78 1059 aaPredicted RBP13.61□□□□□ -0.23
HDGFL3-204ENST00000563790 ANGPT1Q15389 498 aa13.61□□□□□ -0.23
HDGFL3-204ENST00000563790 FBXO33Q7Z6M2 555 aa13.61□□□□□ -0.23
HDGFL3-204ENST00000563790 FBXO22Q8NEZ5 403 aa13.61□□□□□ -0.23
HDGFL3-204ENST00000563790 CD207Q9UJ71 328 aa13.61□□□□□ -0.23
HDGFL3-204ENST00000563790 ITPR3Q14573 2671 aa13.6□□□□□ -0.23
HDGFL3-204ENST00000563790 PRR5-ARHGAP8B1AHC4 643 aa13.6□□□□□ -0.23
HDGFL3-204ENST00000563790 PLIN1O60240 522 aa13.6□□□□□ -0.23
HDGFL3-204ENST00000563790 HOXB7P09629 217 aa13.6□□□□□ -0.23
HDGFL3-204ENST00000563790 TAL1P17542 331 aaPredicted RBP13.6□□□□□ -0.23
HDGFL3-204ENST00000563790 CLCN5P51795 746 aa13.6□□□□□ -0.23
HDGFL3-204ENST00000563790 ARHGAP8P85298 464 aa13.6□□□□□ -0.23
HDGFL3-204ENST00000563790 PPM1JQ5JR12 505 aa13.6□□□□□ -0.23
HDGFL3-204ENST00000563790 FAM196BA6NMK8 535 aa13.59□□□□□ -0.23
HDGFL3-204ENST00000563790 BAIAP3O94812 1187 aa13.59□□□□□ -0.23
HDGFL3-204ENST00000563790 EYA4O95677 639 aa13.59□□□□□ -0.23
HDGFL3-204ENST00000563790 SHC2P98077 582 aa13.59□□□□□ -0.23
HDGFL3-204ENST00000563790 RRP1BQ14684 758 aaKnown RBP13.59□□□□□ -0.23
HDGFL3-204ENST00000563790 DIXDC1Q155Q3 683 aa13.59□□□□□ -0.23
HDGFL3-204ENST00000563790 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
HDGFL3-204ENST00000563790 PARP14Q460N5 1801 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 USP17L10C9JJH3 530 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 H7C1W4 665 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 TBX10O75333 385 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 FRAT2O75474 233 aaPredicted RBP13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 IGKV5-2P06315 115 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 UBE3BQ7Z3V4 1068 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 VPS37DQ86XT2 251 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 ABRAQ8N0Z2 381 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 CFAP53Q96M91 514 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 RAD9AQ99638 391 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 ZBED2Q9BTP6 218 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 FREM2Q5SZK8 3169 aa13.58□□□□□ -0.24
HDGFL3-204ENST00000563790 B4GALT4O60513 344 aa13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 DUSP11O75319 330 aaKnown RBP13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 RFC2P35250 354 aa13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 RING1Q06587 406 aa13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 GPR161Q8N6U8 529 aaKnown RBP13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 TINF2Q9BSI4 451 aa13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 TRPV6Q9H1D0 765 aa13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 PHAXQ9H814 394 aaKnown RBP13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 R4GN57 208 aa13.57□□□□□ -0.24
HDGFL3-204ENST00000563790 C6orf222P0C671 652 aaPredicted RBP13.56□□□□□ -0.24
HDGFL3-204ENST00000563790 KCNJ6P48051 423 aa13.56□□□□□ -0.24
HDGFL3-204ENST00000563790 LMNB2Q03252 620 aa13.56□□□□□ -0.24
HDGFL3-204ENST00000563790 CCDC105Q8IYK2 499 aa13.56□□□□□ -0.24
HDGFL3-204ENST00000563790 HNRNPABQ99729 332 aaKnown RBP13.56□□□□□ -0.24
HDGFL3-204ENST00000563790 C17orf80Q9BSJ5 609 aa13.56□□□□□ -0.24
HDGFL3-204ENST00000563790 MOV10L1Q9BXT6 1211 aaKnown RBP13.56□□□□□ -0.24
HDGFL3-204ENST00000563790 SEZ6LQ9BYH1 1024 aa13.56□□□□□ -0.24
HDGFL3-204ENST00000563790 EMILIN3Q9NT22 766 aa13.56□□□□□ -0.24
HDGFL3-204ENST00000563790 USP17L15C9J2P7 530 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 USP17L13C9JLJ4 530 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 USP17L11C9JVI0 530 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 USP17L18D6R9N7 530 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 USP17L22D6RA61 530 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 USP17L17D6RBQ6 530 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 USP17L19D6RCP7 530 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 USP17L20D6RJB6 530 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 GJB5O95377 273 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 NEFMP07197 916 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 PMLP29590 882 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 USP17L24Q0WX57 530 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 TMCO2Q7Z6W1 182 aaPredicted RBP13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 ZGPATQ8N5A5 531 aaKnown RBP13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 SHCBP1Q8NEM2 672 aa13.55□□□□□ -0.24
HDGFL3-204ENST00000563790 MSLNLQ96KJ4 702 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms