RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 ADM5C9JUS6 153 aa16.16■□□□□ 0.18
SPG7-206ENST00000562775 NR5A1Q13285 461 aa16.16■□□□□ 0.18
SPG7-206ENST00000562775 TYW1BQ6NUM6 668 aa16.16■□□□□ 0.18
SPG7-206ENST00000562775 BTNL9Q6UXG8 535 aa16.16■□□□□ 0.18
SPG7-206ENST00000562775 CCDC84Q86UT8 332 aaPredicted RBP16.16■□□□□ 0.18
SPG7-206ENST00000562775 NUP88Q99567 741 aaPredicted RBP16.16■□□□□ 0.18
SPG7-206ENST00000562775 GLIS2Q9BZE0 524 aaPredicted RBP16.16■□□□□ 0.18
SPG7-206ENST00000562775 KIAA1683Q9H0B3 1180 aa16.16■□□□□ 0.18
SPG7-206ENST00000562775 RTEL1Q9NZ71 1219 aa16.16■□□□□ 0.18
SPG7-206ENST00000562775 RCOR1Q9UKL0 485 aa16.16■□□□□ 0.18
SPG7-206ENST00000562775 USP17L10C9JJH3 530 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 TMEM232C9JQI7 657 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 ZBTB5O15062 677 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 USP2O75604 605 aaPredicted RBP16.15■□□□□ 0.18
SPG7-206ENST00000562775 KLHL40Q2TBA0 621 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 KIAA1755Q5JYT7 1200 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 NOL9Q5SY16 702 aaKnown RBP16.15■□□□□ 0.18
SPG7-206ENST00000562775 SPICE1Q8N0Z3 855 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.15■□□□□ 0.18
SPG7-206ENST00000562775 ZKSCAN4Q969J2 545 aaPredicted RBP16.15■□□□□ 0.18
SPG7-206ENST00000562775 FEZ1Q99689 392 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 WDR18Q9BV38 432 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 PICK1Q9NRD5 415 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 POLR3EQ9NVU0 708 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 PCDHA4Q9UN74 947 aa16.15■□□□□ 0.18
SPG7-206ENST00000562775 UTRNP46939 3433 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 SRCAPQ6ZRS2 3230 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 MBD3O95983 291 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 NAPAP54920 295 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 UBE2HP62256 183 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 EAPPQ56P03 285 aaPredicted RBP16.14■□□□□ 0.17
SPG7-206ENST00000562775 SYDE2Q5VT97 1194 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 BLIDQ8IZY5 108 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 DAGLBQ8NCG7 672 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 TNFRSF25Q93038 417 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 ZMYND12Q9H0C1 365 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 AS3MTQ9HBK9 375 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 FZD1Q9UP38 647 aa16.14■□□□□ 0.17
SPG7-206ENST00000562775 ESYT2A0FGR8 921 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 PPP1R12BO60237 982 aaPredicted RBP16.13■□□□□ 0.17
SPG7-206ENST00000562775 PLA2G6O60733 806 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 GADD45BO75293 160 aaPredicted RBP16.13■□□□□ 0.17
SPG7-206ENST00000562775 YEATS4O95619 227 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 PTPRAP18433 802 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 NASPP49321 788 aaPredicted RBP16.13■□□□□ 0.17
SPG7-206ENST00000562775 CEBPZQ03701 1054 aaKnown RBP16.13■□□□□ 0.17
SPG7-206ENST00000562775 IKQ13123 557 aaPredicted RBP16.13■□□□□ 0.17
SPG7-206ENST00000562775 ZYXQ15942 572 aaKnown RBP16.13■□□□□ 0.17
SPG7-206ENST00000562775 RILPL1Q5EBL4 403 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 ANO1Q5XXA6 986 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 CHURC1Q8WUH1 139 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 LPAR1Q92633 364 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 FTOQ9C0B1 505 aaKnown RBP eCLIP16.13■□□□□ 0.17
SPG7-206ENST00000562775 C6orf50Q9HD87 102 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 GNA11P29992 359 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 NF2P35240 595 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 STAT2P52630 851 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 FAM83BQ5T0W9 1011 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 PPP1R18Q6NYC8 613 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 DLK2Q6UY11 383 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 GPT2Q8TD30 523 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 CDCA5Q96FF9 252 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 CLIC4Q9Y696 253 aa16.13■□□□□ 0.17
SPG7-206ENST00000562775 SMCO2A6NFE2 343 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 USP14P54578 494 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 MAP3K9P80192 1104 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 PRKG1Q13976 671 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 STK38Q15208 465 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 CDC37Q16543 378 aaPredicted RBP16.12■□□□□ 0.17
SPG7-206ENST00000562775 QRICH1Q2TAL8 776 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 FAM160B2Q86V87 743 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 LINC00301Q8NCQ3 95 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 ZNF280CQ8ND82 737 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 COA7Q96BR5 231 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 PRR12Q9ULL5 1215 aa16.12■□□□□ 0.17
SPG7-206ENST00000562775 M0R2N6 131 aa16.11■□□□□ 0.17
SPG7-206ENST00000562775 WDR46O15213 610 aaKnown RBP16.11■□□□□ 0.17
SPG7-206ENST00000562775 PPP1R11O60927 126 aaPredicted RBP16.11■□□□□ 0.17
SPG7-206ENST00000562775 IREB2P48200 963 aaKnown RBP16.11■□□□□ 0.17
SPG7-206ENST00000562775 TOB1P50616 345 aaPredicted RBP16.11■□□□□ 0.17
SPG7-206ENST00000562775 SPP2Q13103 211 aa16.11■□□□□ 0.17
SPG7-206ENST00000562775 SF3A1Q15459 793 aaKnown RBP16.11■□□□□ 0.17
SPG7-206ENST00000562775 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.11■□□□□ 0.17
SPG7-206ENST00000562775 KCNG4Q8TDN1 519 aa16.11■□□□□ 0.17
SPG7-206ENST00000562775 FEM1BQ9UK73 627 aa16.11■□□□□ 0.17
SPG7-206ENST00000562775 NOL7Q9UMY1 257 aaKnown RBP16.11■□□□□ 0.17
SPG7-206ENST00000562775 GOLGA6L4A6NEF3 574 aa16.1■□□□□ 0.17
SPG7-206ENST00000562775 BACE1P56817 501 aa16.1■□□□□ 0.17
SPG7-206ENST00000562775 MTMR2Q13614 643 aa16.1■□□□□ 0.17
SPG7-206ENST00000562775 SLC39A14Q15043 492 aa16.1■□□□□ 0.17
SPG7-206ENST00000562775 EARS2Q5JPH6 523 aaKnown RBP16.1■□□□□ 0.17
SPG7-206ENST00000562775 BICD2Q8TD16 824 aa16.1■□□□□ 0.17
SPG7-206ENST00000562775 PGBD1Q96JS3 809 aa16.1■□□□□ 0.17
SPG7-206ENST00000562775 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
SPG7-206ENST00000562775 ZHX2Q9Y6X8 837 aa16.1■□□□□ 0.17
SPG7-206ENST00000562775 C19orf81C9J6K1 198 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 ADAMTS3O15072 1205 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 SPTLC2O15270 562 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 TRAPPC10P48553 1259 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms