RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 DAGLBQ8NCG7 672 aa9.45□□□□□ -0.9
SMG1-204ENST00000561940 ENOX1Q8TC92 643 aaKnown RBP9.45□□□□□ -0.9
SMG1-204ENST00000561940 CHST7Q9NS84 486 aa9.45□□□□□ -0.9
SMG1-204ENST00000561940 SIRPGQ9P1W8 387 aa9.45□□□□□ -0.9
SMG1-204ENST00000561940 TMEM59LQ9UK28 342 aa9.45□□□□□ -0.9
SMG1-204ENST00000561940 FAM221BA6H8Z2 402 aa9.44□□□□□ -0.9
SMG1-204ENST00000561940 B2RBV5 119 aa9.44□□□□□ -0.9
SMG1-204ENST00000561940 SIGLEC6O43699 453 aa9.44□□□□□ -0.9
SMG1-204ENST00000561940 JUNBP17275 347 aaPredicted RBP9.44□□□□□ -0.9
SMG1-204ENST00000561940 RPL10P27635 214 aaKnown RBP9.44□□□□□ -0.9
SMG1-204ENST00000561940 CASP7P55210 303 aa9.44□□□□□ -0.9
SMG1-204ENST00000561940 RASA3Q14644 834 aa9.44□□□□□ -0.9
SMG1-204ENST00000561940 GNPTABQ3T906 1256 aa9.44□□□□□ -0.9
SMG1-204ENST00000561940 NOP9Q86U38 636 aaKnown RBP9.44□□□□□ -0.9
SMG1-204ENST00000561940 FAM168AQ92567 244 aa9.44□□□□□ -0.9
SMG1-204ENST00000561940 BRF1Q92994 677 aa9.44□□□□□ -0.9
SMG1-204ENST00000561940 SNTG2Q9NY99 539 aa9.44□□□□□ -0.9
SMG1-204ENST00000561940 ZNF214Q9UL59 606 aaPredicted RBP9.44□□□□□ -0.9
SMG1-204ENST00000561940 RNF114Q9Y508 228 aa9.44□□□□□ -0.9
SMG1-204ENST00000561940 CARMIL2Q6F5E8 1435 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
SMG1-204ENST00000561940 SHOXO15266 292 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 SYPP08247 313 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 TRHRP34981 398 aaPredicted RBP9.43□□□□□ -0.9
SMG1-204ENST00000561940 GDNFP39905 211 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 TEKQ02763 1124 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 DDR2Q16832 855 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 ZPBP2Q6X784 338 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 ZNF655Q8N720 491 aaPredicted RBP9.43□□□□□ -0.9
SMG1-204ENST00000561940 FLAD1Q8NFF5 587 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 SYTL4Q96C24 671 aaPredicted RBP9.43□□□□□ -0.9
SMG1-204ENST00000561940 ASIC4Q96FT7 647 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 SRPK1Q96SB4 655 aaKnown RBP9.43□□□□□ -0.9
SMG1-204ENST00000561940 TCFL5Q9UL49 500 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 ZNF451Q9Y4E5 1061 aa9.43□□□□□ -0.9
SMG1-204ENST00000561940 PAX4O43316 350 aa9.42□□□□□ -0.9
SMG1-204ENST00000561940 AFMP43652 599 aa9.42□□□□□ -0.9
SMG1-204ENST00000561940 NOL9Q5SY16 702 aaKnown RBP9.42□□□□□ -0.9
SMG1-204ENST00000561940 JAZF1Q86VZ6 243 aa9.42□□□□□ -0.9
SMG1-204ENST00000561940 C19orf47Q8N9M1 422 aaKnown RBP9.42□□□□□ -0.9
SMG1-204ENST00000561940 DSCC1Q9BVC3 393 aa9.42□□□□□ -0.9
SMG1-204ENST00000561940 C19orf44Q9H6X5 657 aa9.42□□□□□ -0.9
SMG1-204ENST00000561940 EBF1Q9UH73 591 aa9.42□□□□□ -0.9
SMG1-204ENST00000561940 ZGLP1P0C6A0 271 aa9.41□□□□□ -0.9
SMG1-204ENST00000561940 PCBP3P57721 371 aaKnown RBP9.41□□□□□ -0.9
SMG1-204ENST00000561940 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
SMG1-204ENST00000561940 WAPLQ7Z5K2 1190 aa9.41□□□□□ -0.9
SMG1-204ENST00000561940 MKL1Q969V6 931 aa9.41□□□□□ -0.9
SMG1-204ENST00000561940 KIRREL1Q96J84 757 aa9.41□□□□□ -0.9
SMG1-204ENST00000561940 DEPDC7Q96QD5 511 aa9.41□□□□□ -0.9
SMG1-204ENST00000561940 ZMYM5Q9UJ78 669 aa9.41□□□□□ -0.9
SMG1-204ENST00000561940 MSRB2Q9Y3D2 182 aa9.41□□□□□ -0.9
SMG1-204ENST00000561940 GJB6O95452 261 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 CD247P20963 164 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 CTSKP43235 329 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 ZNF445P59923 1031 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 KCNMB1Q16558 191 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 CRTC3Q6UUV7 619 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 CCDC120Q96HB5 630 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 MRFAP1L1Q96HT8 127 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 GP6Q9HCN6 339 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 TBX22Q9Y458 520 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 SLC12A7Q9Y666 1083 aa9.4□□□□□ -0.9
SMG1-204ENST00000561940 SLC7A5Q01650 507 aa9.39□□□□□ -0.91
SMG1-204ENST00000561940 BBS9Q3SYG4 887 aa9.39□□□□□ -0.91
SMG1-204ENST00000561940 MRM1Q6IN84 353 aaKnown RBP9.39□□□□□ -0.91
SMG1-204ENST00000561940 C6orf15Q6UXA7 325 aaPredicted RBP9.39□□□□□ -0.91
SMG1-204ENST00000561940 RNF111Q6ZNA4 994 aa9.39□□□□□ -0.91
SMG1-204ENST00000561940 ZSWIM9Q86XI8 627 aa9.39□□□□□ -0.91
SMG1-204ENST00000561940 NLGN1Q8N2Q7 840 aa9.39□□□□□ -0.91
SMG1-204ENST00000561940 MYLIPQ8WY64 445 aa9.39□□□□□ -0.91
SMG1-204ENST00000561940 SMARCC1Q92922 1105 aaPredicted RBP9.39□□□□□ -0.91
SMG1-204ENST00000561940 PHAXQ9H814 394 aaKnown RBP9.39□□□□□ -0.91
SMG1-204ENST00000561940 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.39□□□□□ -0.91
SMG1-204ENST00000561940 TLDC2A0PJX2 215 aa9.38□□□□□ -0.91
SMG1-204ENST00000561940 RAC2P15153 192 aa9.38□□□□□ -0.91
SMG1-204ENST00000561940 FXNQ16595 210 aa9.38□□□□□ -0.91
SMG1-204ENST00000561940 ANKRD39Q53RE8 183 aa9.38□□□□□ -0.91
SMG1-204ENST00000561940 KIAA1211LQ6NV74 962 aa9.38□□□□□ -0.91
SMG1-204ENST00000561940 ADAT2Q7Z6V5 191 aaKnown RBP9.38□□□□□ -0.91
SMG1-204ENST00000561940 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
SMG1-204ENST00000561940 ADCY4Q8NFM4 1077 aa9.38□□□□□ -0.91
SMG1-204ENST00000561940 ABHD4Q8TB40 342 aa9.38□□□□□ -0.91
SMG1-204ENST00000561940 FGD4Q96M96 766 aa9.38□□□□□ -0.91
SMG1-204ENST00000561940 MRPL42Q9Y6G3 142 aaKnown RBP9.38□□□□□ -0.91
SMG1-204ENST00000561940 H0Y8X5 98 aa9.37□□□□□ -0.91
SMG1-204ENST00000561940 CBFA2T2O43439 604 aa9.37□□□□□ -0.91
SMG1-204ENST00000561940 DDAH1O94760 285 aa9.37□□□□□ -0.91
SMG1-204ENST00000561940 PPP2R5DQ14738 602 aa9.37□□□□□ -0.91
SMG1-204ENST00000561940 TCEAL1Q15170 157 aa9.37□□□□□ -0.91
SMG1-204ENST00000561940 TMEM67Q5HYA8 995 aa9.37□□□□□ -0.91
SMG1-204ENST00000561940 HEATR6Q6AI08 1181 aaKnown RBP9.37□□□□□ -0.91
SMG1-204ENST00000561940 VHLLQ6RSH7 139 aa9.37□□□□□ -0.91
SMG1-204ENST00000561940 KLHL6Q8WZ60 621 aa9.37□□□□□ -0.91
SMG1-204ENST00000561940 LIN37Q96GY3 246 aaPredicted RBP9.37□□□□□ -0.91
SMG1-204ENST00000561940 HAUS7Q99871 368 aa9.37□□□□□ -0.91
SMG1-204ENST00000561940 NOL6Q9H6R4 1146 aaKnown RBP9.37□□□□□ -0.91
SMG1-204ENST00000561940 TMA7Q9Y2S6 64 aaKnown RBP9.37□□□□□ -0.91
SMG1-204ENST00000561940 CADPSQ9ULU8 1353 aa9.37□□□□□ -0.91
SMG1-204ENST00000561940 TMEM82A0PJX8 343 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms