RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CPLX3Q8WVH0 158 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 CD2APQ9Y5K6 639 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 NEDD4P46934 1319 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 USP17L5A8MUK1 530 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 SORBS3O60504 671 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 EEF2P13639 858 aaKnown RBP11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 CNGA1P29973 690 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 MAEAQ7L5Y9 396 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 OSBPL5Q9H0X9 879 aaPredicted RBP11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 MMRN2Q9H8L6 949 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 DNAI1Q9UI46 699 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 ROBO1Q9Y6N7 1651 aa11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 PEAK1Q9H792 1746 aa11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 RGPD8O14715 1765 aaPredicted RBP11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 PSMA7O14818 248 aa11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 TM4SF1P30408 202 aa11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 CETN1Q12798 172 aa11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 GNPTABQ3T906 1256 aa11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 HAUS3Q68CZ6 603 aa11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 SV2BQ7L1I2 683 aa11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 MYOZ2Q9NPC6 264 aa11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 KCNH3Q9ULD8 1083 aa11.96□□□□□ -0.5
CARMIL3-202ENST00000559694 GAS7O60861 476 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 AKR1B1P15121 316 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 CYB5R4Q7L1T6 521 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 LEO1Q8WVC0 666 aaPredicted RBP11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 AZI2Q9H6S1 392 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 HERC5Q9UII4 1024 aaKnown RBP11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 PNMA2Q9UL42 364 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 DLG5Q8TDM6 1919 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 USP17L10C9JJH3 530 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 POLR2DO15514 142 aaKnown RBP11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 IFNAR1P17181 557 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 NSUN7Q8NE18 718 aaKnown RBP11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 GLG1Q92896 1179 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 ZSWIM4Q9H7M6 989 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 VGLL3A8MV65 326 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 HOXA10P31260 410 aaPredicted RBP11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 DMTNQ08495 405 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 AGBL3Q8NEM8 1001 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 MLXIPQ9HAP2 919 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 LUC7LQ9NQ29 371 aaKnown RBP11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 WTIPA6NIX2 430 aaPredicted RBP11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 F5H6K3 240 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 KIAA0754O94854 1291 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 BRD1O95696 1058 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 STX17P56962 302 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 GABPB1Q06547 395 aaPredicted RBP11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 KLRC3Q07444 240 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 NEK8Q86SG6 692 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 TXLNBQ8N3L3 684 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 ENAHQ8N8S7 591 aaPredicted RBP11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 PRMT6Q96LA8 375 aaPredicted RBP11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 DEFB129Q9H1M3 183 aa11.95□□□□□ -0.5
CARMIL3-202ENST00000559694 FLT1P17948 1338 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 ARHGEF35A5YM69 484 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 FGFR2P21802 821 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 USP8P40818 1118 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 FAM83BQ5T0W9 1011 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 HS2ST1Q7LGA3 356 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 STAMQ92783 540 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 AIFM3Q96NN9 605 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 NUP88Q99567 741 aaPredicted RBP11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 RTEL1Q9NZ71 1219 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 SERPINA10Q9UK55 444 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 PCDHA12Q9UN75 941 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 MTMR6Q9Y217 621 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 BCL9LQ86UU0 1499 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 ZNF142P52746 1687 aaPredicted RBP11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 PLEKHA8P1O95397 391 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 LARGE1O95461 756 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 GNG11P61952 73 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 RAD51AP2Q09MP3 1159 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 USP28Q96RU2 1077 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 TMEM39BQ9GZU3 492 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 GPBP1L1Q9HC44 474 aaPredicted RBP11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 N4BP3O15049 544 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 RPS12P25398 132 aaKnown RBP11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 NCBP1Q09161 790 aaKnown RBP11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 GBP3Q9H0R5 595 aa11.94□□□□□ -0.5
CARMIL3-202ENST00000559694 CUTAO60888 179 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 DDNO94850 711 aaPredicted RBP11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 FOSP01100 380 aaPredicted RBP11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 FAM160A1Q05DH4 1040 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 PLA2G4DQ86XP0 818 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 TPH2Q8IWU9 490 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 PGBD1Q96JS3 809 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 CCDC169A6NNP5 214 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 PDE4DQ08499 809 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 FAM160B2Q86V87 743 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 CCDC150Q8NCX0 1101 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 NEDD1Q8NHV4 660 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 ARFGAP3Q9NP61 516 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 GPR75-ASB3A0A0A6YYF3 556 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 ENTPD3O75355 529 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 FMNL1O95466 1100 aaPredicted RBP11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 CDC37Q16543 378 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms