RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 GTF2IRD1Q9UHL9 959 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 TLR6Q9Y2C9 796 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 ANKARQ7Z5J8 1434 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 ALS2Q96Q42 1657 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 BRWD3Q6RI45 1802 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 CDK12Q9NYV4 1490 aaPredicted RBP7.05□□□□□ -1.28
CASC4-207ENST00000559037 ABCA3Q99758 1704 aa7.05□□□□□ -1.28
CASC4-207ENST00000559037 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.05□□□□□ -1.28
CASC4-207ENST00000559037 IGF2BP3O00425 579 aaKnown RBP eCLIP7.05□□□□□ -1.28
CASC4-207ENST00000559037 CILPO75339 1184 aa7.05□□□□□ -1.28
CASC4-207ENST00000559037 RBM6P78332 1123 aaKnown RBP7.05□□□□□ -1.28
CASC4-207ENST00000559037 ARMCX6Q7L4S7 300 aa7.05□□□□□ -1.28
CASC4-207ENST00000559037 STK11IPQ8N1F8 1099 aa7.05□□□□□ -1.28
CASC4-207ENST00000559037 COX4I2Q96KJ9 171 aa7.05□□□□□ -1.28
CASC4-207ENST00000559037 HIRIP3Q9BW71 556 aaPredicted RBP7.05□□□□□ -1.28
CASC4-207ENST00000559037 KCNQ5Q9NR82 932 aa7.05□□□□□ -1.28
CASC4-207ENST00000559037 ANGEL1Q9UNK9 670 aaKnown RBP7.05□□□□□ -1.28
CASC4-207ENST00000559037 BCL9LQ86UU0 1499 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 FAM221AA4D161 298 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 MED26O95402 600 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 WNT11O96014 354 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 PF4P02776 101 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 HOXA10P31260 410 aaPredicted RBP7.04□□□□□ -1.28
CASC4-207ENST00000559037 GRK4P32298 578 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 SNAP47Q5SQN1 464 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 MRPL41Q8IXM3 137 aaKnown RBP7.04□□□□□ -1.28
CASC4-207ENST00000559037 SHISA5Q8N114 240 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 TOP6BLQ8N6T0 577 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 PMFBP1Q8TBY8 1022 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 FBXL18Q96ME1 805 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 FOXQ1Q9C009 403 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 LRRC4CQ9HCJ2 640 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 SBNO1A3KN83 1393 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 TRPM1Q7Z4N2 1603 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 NWD2Q9ULI1 1742 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 CRYBG1Q9Y4K1 1723 aa7.04□□□□□ -1.28
CASC4-207ENST00000559037 TULP4Q9NRJ4 1543 aa7.03□□□□□ -1.28
CASC4-207ENST00000559037 MPP2Q14168 576 aa7.03□□□□□ -1.28
CASC4-207ENST00000559037 SLBPQ14493 270 aaKnown RBP eCLIP7.03□□□□□ -1.28
CASC4-207ENST00000559037 SLC6A19Q695T7 634 aa7.03□□□□□ -1.28
CASC4-207ENST00000559037 NETO1Q8TDF5 533 aa7.03□□□□□ -1.28
CASC4-207ENST00000559037 CDK19Q9BWU1 502 aa7.03□□□□□ -1.28
CASC4-207ENST00000559037 LRRC3Q9BY71 257 aa7.03□□□□□ -1.28
CASC4-207ENST00000559037 KBTBD4Q9NVX7 518 aa7.03□□□□□ -1.28
CASC4-207ENST00000559037 MAPK8IP1Q9UQF2 711 aa7.03□□□□□ -1.28
CASC4-207ENST00000559037 CCDC9Q9Y3X0 531 aaKnown RBP7.03□□□□□ -1.28
CASC4-207ENST00000559037 TOPAZ1Q8N9V7 1692 aa7.03□□□□□ -1.28
CASC4-207ENST00000559037 CST3P01034 146 aaPredicted RBP7.02□□□□□ -1.29
CASC4-207ENST00000559037 ARHGAP27Q6ZUM4 889 aa7.02□□□□□ -1.29
CASC4-207ENST00000559037 TMEM87AQ8NBN3 555 aa7.02□□□□□ -1.29
CASC4-207ENST00000559037 JARID2Q92833 1246 aaPredicted RBP7.02□□□□□ -1.29
CASC4-207ENST00000559037 ZC3H7BQ9UGR2 993 aaKnown RBP7.02□□□□□ -1.29
CASC4-207ENST00000559037 GGT7Q9UJ14 662 aa7.02□□□□□ -1.29
CASC4-207ENST00000559037 TRPC5Q9UL62 973 aaPredicted RBP7.02□□□□□ -1.29
CASC4-207ENST00000559037 SUPT16HQ9Y5B9 1047 aaKnown RBP7.02□□□□□ -1.29
CASC4-207ENST00000559037 EIF3AQ14152 1382 aaKnown RBP7.02□□□□□ -1.29
CASC4-207ENST00000559037 QRICH2Q9H0J4 1663 aa7.02□□□□□ -1.29
CASC4-207ENST00000559037 KAT6BQ8WYB5 2073 aa7.02□□□□□ -1.29
CASC4-207ENST00000559037 ATRNO75882 1429 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 TNS3Q68CZ2 1445 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 SLIT2O94813 1529 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 PLCH1Q4KWH8 1693 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 ATP7BP35670 1465 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 PGRP06401 933 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 CEACAM5P06731 702 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 ZNF76P36508 570 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 EIF4A3P38919 411 aaKnown RBP7.01□□□□□ -1.29
CASC4-207ENST00000559037 IFI16Q16666 785 aaKnown RBP7.01□□□□□ -1.29
CASC4-207ENST00000559037 CWF19L2Q2TBE0 894 aaKnown RBP7.01□□□□□ -1.29
CASC4-207ENST00000559037 NBPF8Q3BBV2 869 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 TMEM201Q5SNT2 666 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 BNC2Q6ZN30 1099 aaPredicted RBP7.01□□□□□ -1.29
CASC4-207ENST00000559037 FAM196AQ6ZSG2 479 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 C22orf34Q6ZV56 151 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 UNC5CLQ8IV45 518 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 GOLM1Q8NBJ4 401 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 AGBL5Q8NDL9 886 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 NGDNQ8NEJ9 315 aaKnown RBP7.01□□□□□ -1.29
CASC4-207ENST00000559037 FBRSQ9HAH7 460 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 PRDM5Q9NQX1 630 aaPredicted RBP7.01□□□□□ -1.29
CASC4-207ENST00000559037 CCDC39Q9UFE4 941 aa7.01□□□□□ -1.29
CASC4-207ENST00000559037 POLR3AO14802 1390 aaPredicted RBP7□□□□□ -1.29
CASC4-207ENST00000559037 ARHGEF10O15013 1369 aa7□□□□□ -1.29
CASC4-207ENST00000559037 GPRASP1Q5JY77 1395 aa7□□□□□ -1.29
CASC4-207ENST00000559037 FAM83GA6ND36 823 aa7□□□□□ -1.29
CASC4-207ENST00000559037 LEFTY1O75610 366 aa7□□□□□ -1.29
CASC4-207ENST00000559037 F13A1P00488 732 aa7□□□□□ -1.29
CASC4-207ENST00000559037 CYP7A1P22680 504 aa7□□□□□ -1.29
CASC4-207ENST00000559037 CDK8P49336 464 aa7□□□□□ -1.29
CASC4-207ENST00000559037 GP2P55259 537 aaKnown RBP7□□□□□ -1.29
CASC4-207ENST00000559037 UBE3DQ7Z6J8 389 aa7□□□□□ -1.29
CASC4-207ENST00000559037 MCATQ8IVS2 390 aaKnown RBP7□□□□□ -1.29
CASC4-207ENST00000559037 TMEM87BQ96K49 555 aa7□□□□□ -1.29
CASC4-207ENST00000559037 SNX11Q9Y5W9 270 aa7□□□□□ -1.29
CASC4-207ENST00000559037 NRAPQ86VF7 1730 aa7□□□□□ -1.29
CASC4-207ENST00000559037 RGS12O14924 1447 aa7□□□□□ -1.29
CASC4-207ENST00000559037 AKAP12Q02952 1782 aa7□□□□□ -1.29
CASC4-207ENST00000559037 CENPJQ9HC77 1338 aaPredicted RBP7□□□□□ -1.29
CASC4-207ENST00000559037 GLI3P10071 1580 aa6.99□□□□□ -1.29
CASC4-207ENST00000559037 TMEM265A0A087WTH1 108 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms