RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TXKP42681 527 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 CTSKP43235 329 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 CHRNEQ04844 493 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 TCEAL1Q15170 157 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 NOL9Q5SY16 702 aaKnown RBP6□□□□□ -1.45
VPS13C-207ENST00000558919 FYB2Q5VWT5 728 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 LILRA2Q8N149 483 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 ANKS4BQ8N8V4 417 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 MYLIPQ8WY64 445 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 GMLQ99445 158 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 BUD13Q9BRD0 619 aaKnown RBP eCLIP6□□□□□ -1.455e-6■■■□□ 16.1
VPS13C-207ENST00000558919 MINPP1Q9UNW1 487 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 ZNF451Q9Y4E5 1061 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 FHOD1Q9Y613 1164 aa6□□□□□ -1.45
VPS13C-207ENST00000558919 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6□□□□□ -1.45
VPS13C-207ENST00000558919 TMEM82A0PJX8 343 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 CBFA2T2O43439 604 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 ZNF205O95201 554 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 FGRP09769 529 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 ITGA4P13612 1032 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 RPL10P27635 214 aaKnown RBP5.99□□□□□ -1.45
VPS13C-207ENST00000558919 ZNF445P59923 1031 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 ERVFC1P60507 584 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 TNNI3KQ59H18 835 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 TMEM67Q5HYA8 995 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 WAPLQ7Z5K2 1190 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 ABHD4Q8TB40 342 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 KLHL6Q8WZ60 621 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 HAUS7Q99871 368 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 G6PC3Q9BUM1 346 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 SP110Q9HB58 689 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 FAM53CQ9NYF3 392 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 WHRNQ9P202 907 aa5.99□□□□□ -1.45
VPS13C-207ENST00000558919 MEIS1O00470 390 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 VAV1P15498 845 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 KIR2DL1P43626 348 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-207ENST00000558919 KIR2DL2P43627 348 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-207ENST00000558919 ZC3H6P61129 1189 aaKnown RBP5.98□□□□□ -1.45
VPS13C-207ENST00000558919 CWF19L1Q69YN2 538 aaKnown RBP5.98□□□□□ -1.45
VPS13C-207ENST00000558919 HEATR6Q6AI08 1181 aaKnown RBP5.98□□□□□ -1.45
VPS13C-207ENST00000558919 VHLLQ6RSH7 139 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 MCF2L2Q86YR7 1114 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 KLHL25Q9H0H3 589 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 GBP3Q9H0R5 595 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 FAM86C1Q9NVL1 165 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 PRKAG3Q9UGI9 489 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 EBF1Q9UH73 591 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 ZMYM5Q9UJ78 669 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 PCDHB10Q9UN67 800 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 DIS3Q9Y2L1 958 aaKnown RBP5.98□□□□□ -1.45
VPS13C-207ENST00000558919 MRVI1Q9Y6F6 885 aa5.98□□□□□ -1.45
VPS13C-207ENST00000558919 ZNF503-AS2A6NEH8 195 aa5.97□□□□□ -1.45
VPS13C-207ENST00000558919 SMAD7O15105 426 aaKnown RBP5.97□□□□□ -1.45
VPS13C-207ENST00000558919 DNAJA1P31689 397 aaKnown RBP5.97□□□□□ -1.45
VPS13C-207ENST00000558919 ETFBP38117 255 aa5.97□□□□□ -1.45
VPS13C-207ENST00000558919 NOP2P46087 812 aaKnown RBP5.97□□□□□ -1.45
VPS13C-207ENST00000558919 KIAA1211LQ6NV74 962 aa5.97□□□□□ -1.45
VPS13C-207ENST00000558919 CRTC3Q6UUV7 619 aa5.97□□□□□ -1.45
VPS13C-207ENST00000558919 FIBCD1Q8N539 461 aa5.97□□□□□ -1.45
VPS13C-207ENST00000558919 BRF1Q92994 677 aa5.97□□□□□ -1.45
VPS13C-207ENST00000558919 MAP6Q96JE9 813 aa5.97□□□□□ -1.45
VPS13C-207ENST00000558919 FCRL2Q96LA5 508 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-207ENST00000558919 ACTR10Q9NZ32 417 aa5.97□□□□□ -1.45
VPS13C-207ENST00000558919 SF3B6Q9Y3B4 125 aaKnown RBP5.97□□□□□ -1.45
VPS13C-207ENST00000558919 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.96□□□□□ -1.46
VPS13C-207ENST00000558919 H0Y8X5 98 aa5.96□□□□□ -1.46
VPS13C-207ENST00000558919 FKTNO75072 461 aa5.96□□□□□ -1.46
VPS13C-207ENST00000558919 PPM1BO75688 479 aa5.96□□□□□ -1.46
VPS13C-207ENST00000558919 EPHX1P07099 455 aa5.96□□□□□ -1.46
VPS13C-207ENST00000558919 ZNF143P52747 638 aaPredicted RBP5.96□□□□□ -1.46
VPS13C-207ENST00000558919 NCAPHQ15003 741 aa5.96□□□□□ -1.46
VPS13C-207ENST00000558919 SNX17Q15036 470 aa5.96□□□□□ -1.46
VPS13C-207ENST00000558919 NOL6Q9H6R4 1146 aaKnown RBP5.96□□□□□ -1.46
VPS13C-207ENST00000558919 ZNF408Q9H9D4 720 aa5.96□□□□□ -1.46
VPS13C-207ENST00000558919 CWC22Q9HCG8 908 aaKnown RBP5.96□□□□□ -1.46
VPS13C-207ENST00000558919 TNFRSF10DQ9UBN6 386 aa5.96□□□□□ -1.46
VPS13C-207ENST00000558919 ARID1BQ8NFD5 2236 aaPredicted RBP5.96□□□□□ -1.46
VPS13C-207ENST00000558919 ANKRD34BA5PLL1 514 aa5.95□□□□□ -1.46
VPS13C-207ENST00000558919 NAT2P11245 290 aa5.95□□□□□ -1.46
VPS13C-207ENST00000558919 POU4F1Q01851 419 aa5.95□□□□□ -1.46
VPS13C-207ENST00000558919 RTP2Q5QGT7 225 aa5.95□□□□□ -1.46
VPS13C-207ENST00000558919 ZPBP2Q6X784 338 aa5.95□□□□□ -1.46
VPS13C-207ENST00000558919 POU5F2Q8N7G0 328 aa5.95□□□□□ -1.46
VPS13C-207ENST00000558919 RCC1LQ96I51 464 aaKnown RBP5.95□□□□□ -1.46
VPS13C-207ENST00000558919 HHIPL1Q96JK4 782 aa5.95□□□□□ -1.46
VPS13C-207ENST00000558919 SLC12A9Q9BXP2 914 aa5.95□□□□□ -1.46
VPS13C-207ENST00000558919 C19orf44Q9H6X5 657 aa5.95□□□□□ -1.46
VPS13C-207ENST00000558919 SUSD2Q9UGT4 822 aa5.95□□□□□ -1.46
VPS13C-207ENST00000558919 NRDCO43847 1150 aa5.94□□□□□ -1.46
VPS13C-207ENST00000558919 TRHRP34981 398 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-207ENST00000558919 NAALADL2Q58DX5 795 aa5.94□□□□□ -1.46
VPS13C-207ENST00000558919 OGFOD2Q6N063 350 aa5.94□□□□□ -1.46
VPS13C-207ENST00000558919 MPZL3Q6UWV2 235 aa5.94□□□□□ -1.46
VPS13C-207ENST00000558919 ADAT2Q7Z6V5 191 aaKnown RBP5.94□□□□□ -1.46
VPS13C-207ENST00000558919 ARHGEF39Q8N4T4 335 aa5.94□□□□□ -1.46
VPS13C-207ENST00000558919 LIN37Q96GY3 246 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-207ENST00000558919 FGD4Q96M96 766 aa5.94□□□□□ -1.46
VPS13C-207ENST00000558919 C8orf37Q96NL8 207 aa5.94□□□□□ -1.46
VPS13C-207ENST00000558919 APBA2Q99767 749 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms